| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669587
Identifier: 15669587
GI number: 15669587
Start: 1356443
End: 1357903
Strand: Direct
Name: 15669587
Synonym: MJ1397
Alternate gene names: NA
Gene position: 1356443-1357903 (Clockwise)
Preceding gene: 15669586
Following gene: 15669588
Centisome position: 81.47
GC content: 28.61
Gene sequence:
>1461_bases TTGGGGACCATGAGATCGGTATATTTAATTATTATTATTATACTATTTTTTGCATTTATTTCTTTAAGTTTTGGGGAAAT ATATGAGTATAGGGGGGTTGTATTTTATCCAAATGGTTCTCAAACAGTTGATGTATCTAAGTTACATATAGATTATGAAA ATCCCGATGCTTTTAGCATCTATATATCTTATAGAAACTCCTCCTTTTATCTTCCATATTCAAAAAATATAACTCTTAAT CTCCCCCCAAAAAAATTTAACATATCCATAACTATATCTGCAAGTAGAATCAGCAGAGATGAATGGAGGGTATATTATAA AATAATCAATAACTATCCCTACAGTATCTTATTTAACATATCTTTTCCAGGAGGATTTAACATTAAAAATGCATCAGTCT TAGTTCCTGCCAAGTCCTATAAAATAATAACTTTATCAAAAATACAAAATTCAAATATTTTATATTTCGGAGATAGCAAT ATAAGTTTTGAAGTACCCGCTAAATTGATGATAAGATATTCTCTGCCAATACCATTTTCCATAATAAAGTCAAATAAAAT TTTAAGTAATGGTTCTATTGAATGGACAGCTATTTATATAATAAAAAATGATAAGAATGTCTCTTTAAATGTAAATGCAA GCTATTGGGCTGTTGTTAATAATACAAAAATAGATTTTGGTAATTATTCCTATATTATAGAACCTAATGAGAATGTATCA CAGTCATTTAATATCACTTCAGATTATGTTCCTATTTTTTATCTTAAATTTTATGCATGGCGAGATGTTTATGAAACTAT AAAAATAAAACCAGCAATTAAGGTTGATAATTCATACATTATTGGAATAGGAAAAGTTGAAGGTTTAAGTTTTAACATTC CATATTATAACTATATGGAAAGAGAAATAAAAAAGAAAAAAGAAGAAAAGGAAAACGAAGAGTCATCTAAAACTATAAAC CAAATGCAGAGACATAAAAAAGAAGAGAAGTCACAGACTCAGGAGACAAAAAAACCTTCTAAAAATGAGATGAATAAACA AGAGAAAGAAAGAAAGTACCCACTAATAATTGAAGAAAAATTTAAAAAAGTAGCTGCTGCTATAGCCACAGTTACAACTA CTTCAATAACTGCTATGTTGATTCCTCCAATATTTAGGAGACGTTCATATATTGTTGATAAAGGGATTTTCTCAATTAAA GACCTTGAACTACTAAGTGGCACAGTATATGTTCCAGAGGGTTGTAAGTTAGGAAATATATTACCTGGAGGTATAACTAT TATTAAACTTACTGATGTAGAAAAAGACCTTGCAAGGGACTTACATGAAATTTATGATATTCCTCTAAATTCAGCAAAAG CCATTATACTGGGTGTTAAGTATGGAGGTAGAGTATTTTTAAGTGATAAAAAGGCGTATGATGTGGCAGTTGAAATAGGA CTTGAAGCATATCTTTTTTAA
Upstream 100 bases:
>100_bases CAACAGTTGAGGGACTTATTATCGGTATTGACCCAAAAAAATAATTCGTCAAAAAATTGTTCTATAAATCTTAAATACTT TAAAAAATAAAACCTAATAA
Downstream 100 bases:
>100_bases ATAGAGGTGAAGTATGTGGTAGAAGAAAACAATAAAGAAATATTAATAAAATTGAAGAAAATTAGAAAAATGCAAAGGAG AAGAACGCTCATTGGTTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MGTMRSVYLIIIIILFFAFISLSFGEIYEYRGVVFYPNGSQTVDVSKLHIDYENPDAFSIYISYRNSSFYLPYSKNITLN LPPKKFNISITISASRISRDEWRVYYKIINNYPYSILFNISFPGGFNIKNASVLVPAKSYKIITLSKIQNSNILYFGDSN ISFEVPAKLMIRYSLPIPFSIIKSNKILSNGSIEWTAIYIIKNDKNVSLNVNASYWAVVNNTKIDFGNYSYIIEPNENVS QSFNITSDYVPIFYLKFYAWRDVYETIKIKPAIKVDNSYIIGIGKVEGLSFNIPYYNYMEREIKKKKEEKENEESSKTIN QMQRHKKEEKSQTQETKKPSKNEMNKQEKERKYPLIIEEKFKKVAAAIATVTTTSITAMLIPPIFRRRSYIVDKGIFSIK DLELLSGTVYVPEGCKLGNILPGGITIIKLTDVEKDLARDLHEIYDIPLNSAKAIILGVKYGGRVFLSDKKAYDVAVEIG LEAYLF
Sequences:
>Translated_486_residues MGTMRSVYLIIIIILFFAFISLSFGEIYEYRGVVFYPNGSQTVDVSKLHIDYENPDAFSIYISYRNSSFYLPYSKNITLN LPPKKFNISITISASRISRDEWRVYYKIINNYPYSILFNISFPGGFNIKNASVLVPAKSYKIITLSKIQNSNILYFGDSN ISFEVPAKLMIRYSLPIPFSIIKSNKILSNGSIEWTAIYIIKNDKNVSLNVNASYWAVVNNTKIDFGNYSYIIEPNENVS QSFNITSDYVPIFYLKFYAWRDVYETIKIKPAIKVDNSYIIGIGKVEGLSFNIPYYNYMEREIKKKKEEKENEESSKTIN QMQRHKKEEKSQTQETKKPSKNEMNKQEKERKYPLIIEEKFKKVAAAIATVTTTSITAMLIPPIFRRRSYIVDKGIFSIK DLELLSGTVYVPEGCKLGNILPGGITIIKLTDVEKDLARDLHEIYDIPLNSAKAIILGVKYGGRVFLSDKKAYDVAVEIG LEAYLF >Mature_485_residues GTMRSVYLIIIIILFFAFISLSFGEIYEYRGVVFYPNGSQTVDVSKLHIDYENPDAFSIYISYRNSSFYLPYSKNITLNL PPKKFNISITISASRISRDEWRVYYKIINNYPYSILFNISFPGGFNIKNASVLVPAKSYKIITLSKIQNSNILYFGDSNI SFEVPAKLMIRYSLPIPFSIIKSNKILSNGSIEWTAIYIIKNDKNVSLNVNASYWAVVNNTKIDFGNYSYIIEPNENVSQ SFNITSDYVPIFYLKFYAWRDVYETIKIKPAIKVDNSYIIGIGKVEGLSFNIPYYNYMEREIKKKKEEKENEESSKTINQ MQRHKKEEKSQTQETKKPSKNEMNKQEKERKYPLIIEEKFKKVAAAIATVTTTSITAMLIPPIFRRRSYIVDKGIFSIKD LELLSGTVYVPEGCKLGNILPGGITIIKLTDVEKDLARDLHEIYDIPLNSAKAIILGVKYGGRVFLSDKKAYDVAVEIGL EAYLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1397_METJA (Q58792)
Other databases:
- EMBL: L77117 - PIR: D64474 - RefSeq: NP_248400.1 - ProteinModelPortal: Q58792 - GeneID: 1452300 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1397 - NMPDR: fig|243232.1.peg.1437 - TIGR: MJ1397 - OMA: IPLNSAK - ProtClustDB: CLSK796846 - BioCyc: MJAN243232:MJ_1397-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55817; Mature: 55686
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: PS00189 LIPOYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTMRSVYLIIIIILFFAFISLSFGEIYEYRGVVFYPNGSQTVDVSKLHIDYENPDAFSI CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEECCCCCEEEEEEEEEECCCCCEEEE YISYRNSSFYLPYSKNITLNLPPKKFNISITISASRISRDEWRVYYKIINNYPYSILFNI EEEEECCEEEEEECCCEEEECCCCEEEEEEEEEHHHCCCCHHEEEEEEECCCCEEEEEEE SFPGGFNIKNASVLVPAKSYKIITLSKIQNSNILYFGDSNISFEVPAKLMIRYSLPIPFS ECCCCCCCCCCEEEEECCCEEEEEEEEECCCCEEEECCCCCEEECCEEEEEEEECCCCEE IIKSNKILSNGSIEWTAIYIIKNDKNVSLNVNASYWAVVNNTKIDFGNYSYIIEPNENVS EEECCEEECCCCEEEEEEEEEECCCEEEEEECCEEEEEEECCEEECCCEEEEECCCCCCC QSFNITSDYVPIFYLKFYAWRDVYETIKIKPAIKVDNSYIIGIGKVEGLSFNIPYYNYME CCCCCCCCCCCEEEEHHHHHHHHHHHEEECEEEEECCEEEEEEEEECCEEEECCCHHHHH REIKKKKEEKENEESSKTINQMQRHKKEEKSQTQETKKPSKNEMNKQEKERKYPLIIEEK HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHCCCCEEEHHH FKKVAAAIATVTTTSITAMLIPPIFRRRSYIVDKGIFSIKDLELLSGTVYVPEGCKLGNI HHHHHHHHHHHHHHHEEEEECCHHHHCCCEEEECCCCEEEEEHHHCCEEECCCCCCCCCC LPGGITIIKLTDVEKDLARDLHEIYDIPLNSAKAIILGVKYGGRVFLSDKKAYDVAVEIG CCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCEEEEECCCCEEEEEEEC LEAYLF EEEEEC >Mature Secondary Structure GTMRSVYLIIIIILFFAFISLSFGEIYEYRGVVFYPNGSQTVDVSKLHIDYENPDAFSI CCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEECCCCCEEEEEEEEEECCCCCEEEE YISYRNSSFYLPYSKNITLNLPPKKFNISITISASRISRDEWRVYYKIINNYPYSILFNI EEEEECCEEEEEECCCEEEECCCCEEEEEEEEEHHHCCCCHHEEEEEEECCCCEEEEEEE SFPGGFNIKNASVLVPAKSYKIITLSKIQNSNILYFGDSNISFEVPAKLMIRYSLPIPFS ECCCCCCCCCCEEEEECCCEEEEEEEEECCCCEEEECCCCCEEECCEEEEEEEECCCCEE IIKSNKILSNGSIEWTAIYIIKNDKNVSLNVNASYWAVVNNTKIDFGNYSYIIEPNENVS EEECCEEECCCCEEEEEEEEEECCCEEEEEECCEEEEEEECCEEECCCEEEEECCCCCCC QSFNITSDYVPIFYLKFYAWRDVYETIKIKPAIKVDNSYIIGIGKVEGLSFNIPYYNYME CCCCCCCCCCCEEEEHHHHHHHHHHHEEECEEEEECCEEEEEEEEECCEEEECCCHHHHH REIKKKKEEKENEESSKTINQMQRHKKEEKSQTQETKKPSKNEMNKQEKERKYPLIIEEK HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHCCCCEEEHHH FKKVAAAIATVTTTSITAMLIPPIFRRRSYIVDKGIFSIKDLELLSGTVYVPEGCKLGNI HHHHHHHHHHHHHHHEEEEECCHHHHCCCEEEECCCCEEEEEHHHCCEEECCCCCCCCCC LPGGITIIKLTDVEKDLARDLHEIYDIPLNSAKAIILGVKYGGRVFLSDKKAYDVAVEIG CCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCEEEEECCCCEEEEEEEC LEAYLF EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087