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The map label for this gene is rpoI

Identifier: 15669580

GI number: 15669580

Start: 1338003

End: 1338332

Strand: Reverse

Name: rpoI

Synonym: MJ1390

Alternate gene names: 15669580

Gene position: 1338332-1338003 (Counterclockwise)

Preceding gene: 15669581

Following gene: 15669579

Centisome position: 80.38

GC content: 25.45

Gene sequence:

>330_bases
GTGAAAGGTATGGATGAGTATGAAAAAATCATCAATGACTTAAATACCATAAACTCAAAAGCAAAATTTATTGGTATTAA
GATTATTATGGTAAGAAGAATTATCGATATGCATAAAGATAATGATAAATTAATAAAAAAGGTATTAGAGGGTATAAAAA
ATACTGATCTTTATGATTTAGTTTTAAATGCATGTCCTGAATTGAAAGGAGAAAGGATTAAAGATGTTTATTTTAAGAAG
AATGATTATTTTAATGTCATTAAAAAGACAATGAGCAGTGAAAATACTGTATTGAAAAATGTGTTGATTAATGATGAATC
TCCGCCCTAA

Upstream 100 bases:

>100_bases
TGTTCTAAAATTTATTTATACTAAAATCTCCACTATATACAATCAAATAGAAAAAAAGAGGATGTAAAATTTTTCAAATT
TTTGAAAGAAATGAAAAAAG

Downstream 100 bases:

>100_bases
AGATGGGAATTTTAGGAGATTATGGGTTAAACTTTCATCCTCTCCTGCTCCATCAAAGCCATATTTCTGAATGCTTATGT
CATAATAATAAACATCTTAG

Product: DNA-directed RNA polymerase subunit I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MKGMDEYEKIINDLNTINSKAKFIGIKIIMVRRIIDMHKDNDKLIKKVLEGIKNTDLYDLVLNACPELKGERIKDVYFKK
NDYFNVIKKTMSSENTVLKNVLINDESPP

Sequences:

>Translated_109_residues
MKGMDEYEKIINDLNTINSKAKFIGIKIIMVRRIIDMHKDNDKLIKKVLEGIKNTDLYDLVLNACPELKGERIKDVYFKK
NDYFNVIKKTMSSENTVLKNVLINDESPP
>Mature_109_residues
MKGMDEYEKIINDLNTINSKAKFIGIKIIMVRRIIDMHKDNDKLIKKVLEGIKNTDLYDLVLNACPELKGERIKDVYFKK
NDYFNVIKKTMSSENTVLKNVLINDESPP

Specific function: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RPOI_METJA (Q58785)

Other databases:

- EMBL:   L77117
- PIR:   E64473
- RefSeq:   NP_248393.1
- GeneID:   1452293
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1390
- NMPDR:   fig|243232.1.peg.1430
- TIGR:   MJ1390
- ProtClustDB:   CLSK214664
- BioCyc:   MJAN243232:MJ_1390-MONOMER
- BRENDA:   2.7.7.6

Pfam domain/function: NA

EC number: =2.7.7.6

Molecular weight: Translated: 12677; Mature: 12677

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGMDEYEKIINDLNTINSKAKFIGIKIIMVRRIIDMHKDNDKLIKKVLEGIKNTDLYDL
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHH
VLNACPELKGERIKDVYFKKNDYFNVIKKTMSSENTVLKNVLINDESPP
HHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKGMDEYEKIINDLNTINSKAKFIGIKIIMVRRIIDMHKDNDKLIKKVLEGIKNTDLYDL
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHH
VLNACPELKGERIKDVYFKKNDYFNVIKKTMSSENTVLKNVLINDESPP
HHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087