Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669570

Identifier: 15669570

GI number: 15669570

Start: 1328814

End: 1329050

Strand: Direct

Name: 15669570

Synonym: MJ1380

Alternate gene names: NA

Gene position: 1328814-1329050 (Clockwise)

Preceding gene: 15669569

Following gene: 15669571

Centisome position: 79.81

GC content: 28.69

Gene sequence:

>237_bases
ATGTCTAAGAGGGATGTTAAAGCATTCCTATATGATATTTTAGAAAGTGCTAATGATGTTATTGAATTTACTAAAGATAT
TGACTATAATGAGTTTATAAATAATAAAATGATACGATATGCGGTTATTAGAGCCTTAGAAATTATTGGAGAAGCGTCAA
GATACATAAATAATGATTTTAGGGAAAAGTTTCCCAACGTCCCATGGAAAGAGATGGTAGGATTAAGAAATATTTAA

Upstream 100 bases:

>100_bases
GAATATTTAGAAAAGATTTTGGGATTAAAAGTTGATTTAATTACAAAAAAATCAATCCACAATCCTTATGTAAAAAAATC
TATTGAGGAGGATTTAATTT

Downstream 100 bases:

>100_bases
TTCATAAATATTTTGGGATTGATTATATCCTTCTTTGGAAGATAGTTAAAGAAGACGTTCCTAAAATAAAGAAAGAAGTT
GAGATAGTTTTAAAAGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 77

Protein sequence:

>78_residues
MSKRDVKAFLYDILESANDVIEFTKDIDYNEFINNKMIRYAVIRALEIIGEASRYINNDFREKFPNVPWKEMVGLRNI

Sequences:

>Translated_78_residues
MSKRDVKAFLYDILESANDVIEFTKDIDYNEFINNKMIRYAVIRALEIIGEASRYINNDFREKFPNVPWKEMVGLRNI
>Mature_77_residues
SKRDVKAFLYDILESANDVIEFTKDIDYNEFINNKMIRYAVIRALEIIGEASRYINNDFREKFPNVPWKEMVGLRNI

Specific function: Unknown

COG id: COG2361

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0331 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1380_METJA (Q58775)

Other databases:

- EMBL:   L77117
- PIR:   C64472
- RefSeq:   NP_248383.1
- GeneID:   1452283
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1380
- NMPDR:   fig|243232.1.peg.1420
- TIGR:   MJ1380
- HOGENOM:   HBG660714
- OMA:   IGEASRY
- ProtClustDB:   CLSK2517728
- BioCyc:   MJAN243232:MJ_1380-MONOMER
- InterPro:   IPR008201

Pfam domain/function: PF01934 DUF86

EC number: NA

Molecular weight: Translated: 9306; Mature: 9175

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRDVKAFLYDILESANDVIEFTKDIDYNEFINNKMIRYAVIRALEIIGEASRYINNDF
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REKFPNVPWKEMVGLRNI
HHHCCCCCHHHHCCCCCC
>Mature Secondary Structure 
SKRDVKAFLYDILESANDVIEFTKDIDYNEFINNKMIRYAVIRALEIIGEASRYINNDF
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REKFPNVPWKEMVGLRNI
HHHCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087