| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669570
Identifier: 15669570
GI number: 15669570
Start: 1328814
End: 1329050
Strand: Direct
Name: 15669570
Synonym: MJ1380
Alternate gene names: NA
Gene position: 1328814-1329050 (Clockwise)
Preceding gene: 15669569
Following gene: 15669571
Centisome position: 79.81
GC content: 28.69
Gene sequence:
>237_bases ATGTCTAAGAGGGATGTTAAAGCATTCCTATATGATATTTTAGAAAGTGCTAATGATGTTATTGAATTTACTAAAGATAT TGACTATAATGAGTTTATAAATAATAAAATGATACGATATGCGGTTATTAGAGCCTTAGAAATTATTGGAGAAGCGTCAA GATACATAAATAATGATTTTAGGGAAAAGTTTCCCAACGTCCCATGGAAAGAGATGGTAGGATTAAGAAATATTTAA
Upstream 100 bases:
>100_bases GAATATTTAGAAAAGATTTTGGGATTAAAAGTTGATTTAATTACAAAAAAATCAATCCACAATCCTTATGTAAAAAAATC TATTGAGGAGGATTTAATTT
Downstream 100 bases:
>100_bases TTCATAAATATTTTGGGATTGATTATATCCTTCTTTGGAAGATAGTTAAAGAAGACGTTCCTAAAATAAAGAAAGAAGTT GAGATAGTTTTAAAAGATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MSKRDVKAFLYDILESANDVIEFTKDIDYNEFINNKMIRYAVIRALEIIGEASRYINNDFREKFPNVPWKEMVGLRNI
Sequences:
>Translated_78_residues MSKRDVKAFLYDILESANDVIEFTKDIDYNEFINNKMIRYAVIRALEIIGEASRYINNDFREKFPNVPWKEMVGLRNI >Mature_77_residues SKRDVKAFLYDILESANDVIEFTKDIDYNEFINNKMIRYAVIRALEIIGEASRYINNDFREKFPNVPWKEMVGLRNI
Specific function: Unknown
COG id: COG2361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0331 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1380_METJA (Q58775)
Other databases:
- EMBL: L77117 - PIR: C64472 - RefSeq: NP_248383.1 - GeneID: 1452283 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1380 - NMPDR: fig|243232.1.peg.1420 - TIGR: MJ1380 - HOGENOM: HBG660714 - OMA: IGEASRY - ProtClustDB: CLSK2517728 - BioCyc: MJAN243232:MJ_1380-MONOMER - InterPro: IPR008201
Pfam domain/function: PF01934 DUF86
EC number: NA
Molecular weight: Translated: 9306; Mature: 9175
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRDVKAFLYDILESANDVIEFTKDIDYNEFINNKMIRYAVIRALEIIGEASRYINNDF CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REKFPNVPWKEMVGLRNI HHHCCCCCHHHHCCCCCC >Mature Secondary Structure SKRDVKAFLYDILESANDVIEFTKDIDYNEFINNKMIRYAVIRALEIIGEASRYINNDF CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REKFPNVPWKEMVGLRNI HHHCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087