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The map label for this gene is 15669540

Identifier: 15669540

GI number: 15669540

Start: 1296131

End: 1297213

Strand: Reverse

Name: 15669540

Synonym: MJ1349

Alternate gene names: NA

Gene position: 1297213-1296131 (Counterclockwise)

Preceding gene: 15669541

Following gene: 15669535

Centisome position: 77.91

GC content: 35.55

Gene sequence:

>1083_bases
GTGAGATTAATGAAATCTTACAAAAACCTAAAAGAGGAAGTTTGGGATACTAATAGATGTAGTGGTTGTGGAGCTTGTGT
TGCAGTTTGTCCAGTAAATAACCTATATTTTAGAGAAGAAAGCCCAGTAAAGTTTGAGTGCGATGAATGTTCCTGTATAA
TAGTCCCAGCAGATATCGTTGAGCATCCAATTTCAGCAGAGTTCTGTAAGACAGTAGTTTATGACGTCCCTTGTGGAGCT
TGTTACGATGCCTGCCCAAGGATAAAAAAATCTGCTATTCCAAAACCAAAGGGATTGGGGAATATATTAAAGGCAGTTAG
AGCTAAAGCATCAATAGAGATAAAGAATGCCCAAAATGGTGGAGTTGTAACAGCCATATTGGCAAATGCGTTTGATGAAG
GATTAATAGATGGAGCCATTGTAATGATGGATGACAAATGGACTTTAGAGCCAGAATCATATTTGGCGTTATCAAAAGAA
GATGTTTTAAAGTCTGCTGGTAGCAAATACCTATGGAAAGGTCCAATATTAAAGGCGTTAAAAACAGCAGTTATGGAAAA
GAAACTTAAAAAATTAGCTGTTGTTGGGACTCCTTGTGTTATAAACGCTATCTATCAGATACTATCATCAGATAACGACT
TATTAAAGCCATTCAGAGAAGCTATAAGATTAAAAATTGCCCTGTTCTGTTTTGAGACTTATGATTACAGCAAGATGATT
AAAAAGCTTAATGAAGATGGCATAGAGCCATGGGAAGTTAAAAAGATGGATATCGAATCTGGTAAGTTAAAGATAACCTT
AATCAATGGAAACACTGTTGAATATAAGCTTAAAGATGTTGAGTCTGCAATGAGGAATGGTTGCAAGGTTTGCGGAGATT
TCACTGGCTTAACATCAGATATTTCAGTTGGTAATGTGGGAACTGAGAAAGGCTATTCAACAGTCTTAATAAGAAACAAG
TGGGGAGAAGGATTCTTTAAGAGAGCAGTTTATAATGGTTATATAACCTATGATGAGAACGTTGATTTAGAAGCAGTTGA
AAAACTTGTTGAATTAAAGAAAAAGAGAGTTAAAAAGGATTAA

Upstream 100 bases:

>100_bases
ATGGTTGCGGAAGCTCTATACTCCCCGACTTAATGTAATTTAATAGAAATTTTTATCAATTTTTAAAACTATTTAGAAGA
AACACCAAAATGAGCCTTAG

Downstream 100 bases:

>100_bases
ATTCAACTATAACTTTTTTTCAATAAACTCTTTCAAAACATAATAATCCAAGATTTCATTTAATAAATCATCATTATGGG
CATCTTTATAGGTATTTGGT

Product: coenzyme F420-reducing hydrogenase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MRLMKSYKNLKEEVWDTNRCSGCGACVAVCPVNNLYFREESPVKFECDECSCIIVPADIVEHPISAEFCKTVVYDVPCGA
CYDACPRIKKSAIPKPKGLGNILKAVRAKASIEIKNAQNGGVVTAILANAFDEGLIDGAIVMMDDKWTLEPESYLALSKE
DVLKSAGSKYLWKGPILKALKTAVMEKKLKKLAVVGTPCVINAIYQILSSDNDLLKPFREAIRLKIALFCFETYDYSKMI
KKLNEDGIEPWEVKKMDIESGKLKITLINGNTVEYKLKDVESAMRNGCKVCGDFTGLTSDISVGNVGTEKGYSTVLIRNK
WGEGFFKRAVYNGYITYDENVDLEAVEKLVELKKKRVKKD

Sequences:

>Translated_360_residues
MRLMKSYKNLKEEVWDTNRCSGCGACVAVCPVNNLYFREESPVKFECDECSCIIVPADIVEHPISAEFCKTVVYDVPCGA
CYDACPRIKKSAIPKPKGLGNILKAVRAKASIEIKNAQNGGVVTAILANAFDEGLIDGAIVMMDDKWTLEPESYLALSKE
DVLKSAGSKYLWKGPILKALKTAVMEKKLKKLAVVGTPCVINAIYQILSSDNDLLKPFREAIRLKIALFCFETYDYSKMI
KKLNEDGIEPWEVKKMDIESGKLKITLINGNTVEYKLKDVESAMRNGCKVCGDFTGLTSDISVGNVGTEKGYSTVLIRNK
WGEGFFKRAVYNGYITYDENVDLEAVEKLVELKKKRVKKD
>Mature_360_residues
MRLMKSYKNLKEEVWDTNRCSGCGACVAVCPVNNLYFREESPVKFECDECSCIIVPADIVEHPISAEFCKTVVYDVPCGA
CYDACPRIKKSAIPKPKGLGNILKAVRAKASIEIKNAQNGGVVTAILANAFDEGLIDGAIVMMDDKWTLEPESYLALSKE
DVLKSAGSKYLWKGPILKALKTAVMEKKLKKLAVVGTPCVINAIYQILSSDNDLLKPFREAIRLKIALFCFETYDYSKMI
KKLNEDGIEPWEVKKMDIESGKLKITLINGNTVEYKLKDVESAMRNGCKVCGDFTGLTSDISVGNVGTEKGYSTVLIRNK
WGEGFFKRAVYNGYITYDENVDLEAVEKLVELKKKRVKKD

Specific function: Unknown

COG id: COG1035

COG function: function code C; Coenzyme F420-reducing hydrogenase, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1349_METJA (Q58744)

Other databases:

- EMBL:   L77117
- PIR:   D64468
- RefSeq:   NP_248351.1
- ProteinModelPortal:   Q58744
- SMR:   Q58744
- GeneID:   1452252
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1349
- NMPDR:   fig|243232.1.peg.1388
- TIGR:   MJ1349
- HOGENOM:   HBG538970
- OMA:   VGTPCVI
- ProtClustDB:   CLSK876542
- BioCyc:   MJAN243232:MJ_1349-MONOMER
- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR007516
- InterPro:   IPR007525

Pfam domain/function: PF00037 Fer4; PF04432 FrhB_FdhB_C; PF04422 FrhB_FdhB_N

EC number: NA

Molecular weight: Translated: 40099; Mature: 40099

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLMKSYKNLKEEVWDTNRCSGCGACVAVCPVNNLYFREESPVKFECDECSCIIVPADIV
CCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEECCCCCCEEECCCCCEEEEEHHHH
EHPISAEFCKTVVYDVPCGACYDACPRIKKSAIPKPKGLGNILKAVRAKASIEIKNAQNG
CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEECCCCC
GVVTAILANAFDEGLIDGAIVMMDDKWTLEPESYLALSKEDVLKSAGSKYLWKGPILKAL
CEEHHHHHHHHHCCCCCCEEEEECCCEEECCHHHHCCCHHHHHHHCCCCEEECCHHHHHH
KTAVMEKKLKKLAVVGTPCVINAIYQILSSDNDLLKPFREAIRLKIALFCFETYDYSKMI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEECCCHHHHH
KKLNEDGIEPWEVKKMDIESGKLKITLINGNTVEYKLKDVESAMRNGCKVCGDFTGLTSD
HHHHHCCCCCCEEEEEEECCCEEEEEEEECCEEEEEHHHHHHHHHCCCEECCCCCCCCCC
ISVGNVGTEKGYSTVLIRNKWGEGFFKRAVYNGYITYDENVDLEAVEKLVELKKKRVKKD
CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRLMKSYKNLKEEVWDTNRCSGCGACVAVCPVNNLYFREESPVKFECDECSCIIVPADIV
CCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEECCCCCCEEECCCCCEEEEEHHHH
EHPISAEFCKTVVYDVPCGACYDACPRIKKSAIPKPKGLGNILKAVRAKASIEIKNAQNG
CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEECCCCC
GVVTAILANAFDEGLIDGAIVMMDDKWTLEPESYLALSKEDVLKSAGSKYLWKGPILKAL
CEEHHHHHHHHHCCCCCCEEEEECCCEEECCHHHHCCCHHHHHHHCCCCEEECCHHHHHH
KTAVMEKKLKKLAVVGTPCVINAIYQILSSDNDLLKPFREAIRLKIALFCFETYDYSKMI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEECCCHHHHH
KKLNEDGIEPWEVKKMDIESGKLKITLINGNTVEYKLKDVESAMRNGCKVCGDFTGLTSD
HHHHHCCCCCCEEEEEEECCCEEEEEEEECCEEEEEHHHHHHHHHCCCEECCCCCCCCCC
ISVGNVGTEKGYSTVLIRNKWGEGFFKRAVYNGYITYDENVDLEAVEKLVELKKKRVKKD
CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087