| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669511
Identifier: 15669511
GI number: 15669511
Start: 1268210
End: 1270351
Strand: Reverse
Name: 15669511
Synonym: MJ1321
Alternate gene names: NA
Gene position: 1270351-1268210 (Counterclockwise)
Preceding gene: 15669512
Following gene: 15669510
Centisome position: 76.3
GC content: 25.91
Gene sequence:
>2142_bases ATGGTTTTAAATAAAGTTACATATAAAATAAATGCATACAAAATAAAAGAAGAATTTATTCCTAAAGAAGTGCATTTCTA TAGAATTAAAAGTTTTGTTAATGAAGCATTTAATTTTTATAGATTTGTTAATTTTTATGGTGGCATGATAATTAATAAAA AAGATAAAAGTTTTGTTTTACCATACAAAGTTGATAATAAAGTATTGAAATACAAAGATGGAAATAACGAAATCCCAATA GACATTGAATATATTAAATCATTAAAATTAGAATATGTAAAACCAGAAATAGCTGAAAAACTTGTTAGGGGATATCTTAA ATCTGTCCATAAAATAGAGCCAGAATTATCAAGAATTATAAAAAACATTAGAAAACACAAAGTAGTGGAAAATATAAAAG TTGAGTCATATTGTGAGTATGAAGTTAAAAAACATGATGGGGATTATTATCTTATATTAAACTTTAGACATACAGCGTCT ATTACAAAACACTTATGGGATTTTGTTAATAGAGATAAAGCACTATTAGAGGAGTATGTTGGGAAAAAGATTATCTTTAA ACCTAATCCAAAGGTAAGATATACAATTTCACTGGTTGATGCTCCAAACCCTCAAAAAATAGAGGAAATAATGAGTCACA TAATTAAATATTACAAATGGTCTGAAGATATGGTAAAATCTACTTTTGGGGAGATTGATTATAATCAACCCATTATGTAT TGTGAAGAAATCTTAGAACCATTTGCTCCACAATTTTGTAATCTTGTATTTTATATGGATGAATTAGATAGCTATATTCT TAAAGAATTGCAGAGTTATTGGAGATTATCTAATGAAAATAAGGGAAAAATTATAAATGAAATAGCAAAAAAACTTAGAT TTATAGATAATACACCTAAAGAATTAGAATTTATGAAATTTAATAATACTCCATTGCTCGTGAAGGATGTAAATAAAAAT CCTACCAAAATATATTCAACAAATACATTATTTACGTGGATTTACAATCAAAATGCAAAAATATATCTCCCATATGATGT CCCAGAAATTATAAGGAACAAAAATTTATTAACATACATACTTATTGATGAGGAAATCAAGGATGAATTAAAAGCTATTA AAGATAAAGTAAATAAAATGTTTAGAAACTATAACAAAATTGCTAATAAAACAGAATTGCCAAAATTCAATTATGCCAAT AGATGGAAATATTTTTCTACAGATGACATTAGGGGAATTATAAAAGAAATAAAATCTGAATTTAATGATGAAATATGTTT TGCGTTAATTATTGGAAAAGAAAAATACAAAGATAATGATTATTATGAAATTTTGAAAAAACAACTTTTTGATTTAAAAA TAATCTCTCAAAATATATTATGGGAAAATTGGAGGAAAGATGACAAAGGATATATGACTAATAATTTACTTATACAAATT ATGGGAAAATTGGGGATTAAATATTTTATCTTAGATTCTAAGACACCTTATGATTACATAATGGGACTTGACACTGGATT GGGAATTTTTGGTAATCATAGAGTTGGAGGTTGCACTGTGGTATATGACTCAGAAGGTAAAATAAGAAGAATACAGCCAA TAGAGACACCAGCTCCAGGAGAACGGTTACATCTGCCGTATGTAATAGAATATTTAGAAAATAAAGCAAACATTGATATG GAAAATAAAAATATTCTATTCTTAAGAGATGGTTTTATTCAGAATTCTGAAAGAAATGACCTAAAAGAAATCTCTAAAGA ACTAAATTCAAATATTGAAGTAATTAGCATTAGAAAAAACAATAAATATAAAGTTTTTACGTCTGATTATAGAATTGGAA GTGTATTTGGAAATGATGGTATCTTCTTACCTCACAAAACTCCATTTGGTTCAAATCCTGTAAAATTATCAACTTGGTTA AGGTTTAATTGTGGAAATGAAGAAGGGTTAAAAATTAATGAATCAATTATGCAATTGTTATATGATTTAACTAAAATGAA CTATTCTGCACTATATGGAGAAGGTAGATATCTTAGAATTCCAGCACCAATACATTATGCAGATAAATTTGTTAAAGCAC TTGGTAAAAATTGGAAAATAGATGAAGAACTGCTAAAGCATGGATTCTTATATTTCATATAA
Upstream 100 bases:
>100_bases CAGAGAGCTTGAAGATGTAGCAGATGTGATAATCAATGTTAAAAAAGATGGGAATGTTTCAAAAGTTAAGATTAATGGAT AGTTATGAGGAGGATATAAT
Downstream 100 bases:
>100_bases AAAAGAGGTGAATCTAAGATATGTATAAAATAGTTCCAGATACCAACTTTTTAATTTACGTTTTTAAGCATAAGATAAAC TTTGATTATGAGATAGAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 713; Mature: 713
Protein sequence:
>713_residues MVLNKVTYKINAYKIKEEFIPKEVHFYRIKSFVNEAFNFYRFVNFYGGMIINKKDKSFVLPYKVDNKVLKYKDGNNEIPI DIEYIKSLKLEYVKPEIAEKLVRGYLKSVHKIEPELSRIIKNIRKHKVVENIKVESYCEYEVKKHDGDYYLILNFRHTAS ITKHLWDFVNRDKALLEEYVGKKIIFKPNPKVRYTISLVDAPNPQKIEEIMSHIIKYYKWSEDMVKSTFGEIDYNQPIMY CEEILEPFAPQFCNLVFYMDELDSYILKELQSYWRLSNENKGKIINEIAKKLRFIDNTPKELEFMKFNNTPLLVKDVNKN PTKIYSTNTLFTWIYNQNAKIYLPYDVPEIIRNKNLLTYILIDEEIKDELKAIKDKVNKMFRNYNKIANKTELPKFNYAN RWKYFSTDDIRGIIKEIKSEFNDEICFALIIGKEKYKDNDYYEILKKQLFDLKIISQNILWENWRKDDKGYMTNNLLIQI MGKLGIKYFILDSKTPYDYIMGLDTGLGIFGNHRVGGCTVVYDSEGKIRRIQPIETPAPGERLHLPYVIEYLENKANIDM ENKNILFLRDGFIQNSERNDLKEISKELNSNIEVISIRKNNKYKVFTSDYRIGSVFGNDGIFLPHKTPFGSNPVKLSTWL RFNCGNEEGLKINESIMQLLYDLTKMNYSALYGEGRYLRIPAPIHYADKFVKALGKNWKIDEELLKHGFLYFI
Sequences:
>Translated_713_residues MVLNKVTYKINAYKIKEEFIPKEVHFYRIKSFVNEAFNFYRFVNFYGGMIINKKDKSFVLPYKVDNKVLKYKDGNNEIPI DIEYIKSLKLEYVKPEIAEKLVRGYLKSVHKIEPELSRIIKNIRKHKVVENIKVESYCEYEVKKHDGDYYLILNFRHTAS ITKHLWDFVNRDKALLEEYVGKKIIFKPNPKVRYTISLVDAPNPQKIEEIMSHIIKYYKWSEDMVKSTFGEIDYNQPIMY CEEILEPFAPQFCNLVFYMDELDSYILKELQSYWRLSNENKGKIINEIAKKLRFIDNTPKELEFMKFNNTPLLVKDVNKN PTKIYSTNTLFTWIYNQNAKIYLPYDVPEIIRNKNLLTYILIDEEIKDELKAIKDKVNKMFRNYNKIANKTELPKFNYAN RWKYFSTDDIRGIIKEIKSEFNDEICFALIIGKEKYKDNDYYEILKKQLFDLKIISQNILWENWRKDDKGYMTNNLLIQI MGKLGIKYFILDSKTPYDYIMGLDTGLGIFGNHRVGGCTVVYDSEGKIRRIQPIETPAPGERLHLPYVIEYLENKANIDM ENKNILFLRDGFIQNSERNDLKEISKELNSNIEVISIRKNNKYKVFTSDYRIGSVFGNDGIFLPHKTPFGSNPVKLSTWL RFNCGNEEGLKINESIMQLLYDLTKMNYSALYGEGRYLRIPAPIHYADKFVKALGKNWKIDEELLKHGFLYFI >Mature_713_residues MVLNKVTYKINAYKIKEEFIPKEVHFYRIKSFVNEAFNFYRFVNFYGGMIINKKDKSFVLPYKVDNKVLKYKDGNNEIPI DIEYIKSLKLEYVKPEIAEKLVRGYLKSVHKIEPELSRIIKNIRKHKVVENIKVESYCEYEVKKHDGDYYLILNFRHTAS ITKHLWDFVNRDKALLEEYVGKKIIFKPNPKVRYTISLVDAPNPQKIEEIMSHIIKYYKWSEDMVKSTFGEIDYNQPIMY CEEILEPFAPQFCNLVFYMDELDSYILKELQSYWRLSNENKGKIINEIAKKLRFIDNTPKELEFMKFNNTPLLVKDVNKN PTKIYSTNTLFTWIYNQNAKIYLPYDVPEIIRNKNLLTYILIDEEIKDELKAIKDKVNKMFRNYNKIANKTELPKFNYAN RWKYFSTDDIRGIIKEIKSEFNDEICFALIIGKEKYKDNDYYEILKKQLFDLKIISQNILWENWRKDDKGYMTNNLLIQI MGKLGIKYFILDSKTPYDYIMGLDTGLGIFGNHRVGGCTVVYDSEGKIRRIQPIETPAPGERLHLPYVIEYLENKANIDM ENKNILFLRDGFIQNSERNDLKEISKELNSNIEVISIRKNNKYKVFTSDYRIGSVFGNDGIFLPHKTPFGSNPVKLSTWL RFNCGNEEGLKINESIMQLLYDLTKMNYSALYGEGRYLRIPAPIHYADKFVKALGKNWKIDEELLKHGFLYFI
Specific function: Unknown
COG id: COG1431
COG function: function code J; Uncharacterized protein containing piwi/argonaute domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Piwi domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1321_METJA (Q58717)
Other databases:
- EMBL: L77117 - PIR: H64464 - RefSeq: NP_248321.1 - ProteinModelPortal: Q58717 - SMR: Q58717 - GeneID: 1452223 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1321 - NMPDR: fig|243232.1.peg.1358 - TIGR: MJ1321 - OMA: KINESIM - ProtClustDB: CLSK214007 - BioCyc: MJAN243232:MJ_1321-MONOMER - InterPro: IPR003100 - InterPro: IPR003165 - InterPro: IPR012337 - SMART: SM00950
Pfam domain/function: PF02171 Piwi; SSF53098 RNaseH_fold; SSF101690 SSF101690
EC number: NA
Molecular weight: Translated: 84584; Mature: 84584
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: PS50822 PIWI
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLNKVTYKINAYKIKEEFIPKEVHFYRIKSFVNEAFNFYRFVNFYGGMIINKKDKSFVL CCCCEEEEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEE PYKVDNKVLKYKDGNNEIPIDIEYIKSLKLEYVKPEIAEKLVRGYLKSVHKIEPELSRII EEEECCCEEEEECCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHH KNIRKHKVVENIKVESYCEYEVKKHDGDYYLILNFRHTASITKHLWDFVNRDKALLEEYV HHHHHHHHHHHCCCCHHEEEEEEECCCCEEEEEEECHHHHHHHHHHHHHCCCHHHHHHHC GKKIIFKPNPKVRYTISLVDAPNPQKIEEIMSHIIKYYKWSEDMVKSTFGEIDYNQPIMY CCEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHH CEEILEPFAPQFCNLVFYMDELDSYILKELQSYWRLSNENKGKIINEIAKKLRFIDNTPK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC ELEFMKFNNTPLLVKDVNKNPTKIYSTNTLFTWIYNQNAKIYLPYDVPEIIRNKNLLTYI CEEEEEECCCEEEEEECCCCCCEEEECCEEEEEEEECCCEEEECCCCHHHHCCCCEEEEE LIDEEIKDELKAIKDKVNKMFRNYNKIANKTELPKFNYANRWKYFSTDDIRGIIKEIKSE EECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH FNDEICFALIIGKEKYKDNDYYEILKKQLFDLKIISQNILWENWRKDDKGYMTNNLLIQI CCCCEEEEEEEECHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH MGKLGIKYFILDSKTPYDYIMGLDTGLGIFGNHRVGGCTVVYDSEGKIRRIQPIETPAPG HHHCCEEEEEECCCCCHHHEEECCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCC ERLHLPYVIEYLENKANIDMENKNILFLRDGFIQNSERNDLKEISKELNSNIEVISIRKN CEEECHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEEEC NKYKVFTSDYRIGSVFGNDGIFLPHKTPFGSNPVKLSTWLRFNCGNEEGLKINESIMQLL CEEEEEECCEEEEEEECCCCEECCCCCCCCCCCEEEEEEEEEECCCCCCCEEHHHHHHHH YDLTKMNYSALYGEGRYLRIPAPIHYADKFVKALGKNWKIDEELLKHGFLYFI HHHHHCCCCEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHCCCEEEC >Mature Secondary Structure MVLNKVTYKINAYKIKEEFIPKEVHFYRIKSFVNEAFNFYRFVNFYGGMIINKKDKSFVL CCCCEEEEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEE PYKVDNKVLKYKDGNNEIPIDIEYIKSLKLEYVKPEIAEKLVRGYLKSVHKIEPELSRII EEEECCCEEEEECCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHH KNIRKHKVVENIKVESYCEYEVKKHDGDYYLILNFRHTASITKHLWDFVNRDKALLEEYV HHHHHHHHHHHCCCCHHEEEEEEECCCCEEEEEEECHHHHHHHHHHHHHCCCHHHHHHHC GKKIIFKPNPKVRYTISLVDAPNPQKIEEIMSHIIKYYKWSEDMVKSTFGEIDYNQPIMY CCEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHH CEEILEPFAPQFCNLVFYMDELDSYILKELQSYWRLSNENKGKIINEIAKKLRFIDNTPK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC ELEFMKFNNTPLLVKDVNKNPTKIYSTNTLFTWIYNQNAKIYLPYDVPEIIRNKNLLTYI CEEEEEECCCEEEEEECCCCCCEEEECCEEEEEEEECCCEEEECCCCHHHHCCCCEEEEE LIDEEIKDELKAIKDKVNKMFRNYNKIANKTELPKFNYANRWKYFSTDDIRGIIKEIKSE EECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH FNDEICFALIIGKEKYKDNDYYEILKKQLFDLKIISQNILWENWRKDDKGYMTNNLLIQI CCCCEEEEEEEECHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH MGKLGIKYFILDSKTPYDYIMGLDTGLGIFGNHRVGGCTVVYDSEGKIRRIQPIETPAPG HHHCCEEEEEECCCCCHHHEEECCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCC ERLHLPYVIEYLENKANIDMENKNILFLRDGFIQNSERNDLKEISKELNSNIEVISIRKN CEEECHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEEEC NKYKVFTSDYRIGSVFGNDGIFLPHKTPFGSNPVKLSTWLRFNCGNEEGLKINESIMQLL CEEEEEECCEEEEEEECCCCEECCCCCCCCCCCEEEEEEEEEECCCCCCCEEHHHHHHHH YDLTKMNYSALYGEGRYLRIPAPIHYADKFVKALGKNWKIDEELLKHGFLYFI HHHHHCCCCEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087