| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669480
Identifier: 15669480
GI number: 15669480
Start: 1237723
End: 1238445
Strand: Reverse
Name: 15669480
Synonym: MJ1291
Alternate gene names: NA
Gene position: 1238445-1237723 (Counterclockwise)
Preceding gene: 15669484
Following gene: 15669479
Centisome position: 74.38
GC content: 28.63
Gene sequence:
>723_bases ATGAACAAGTCGGGAATGTCCCTAATAATTACAATGTTATTATTAATAGGAACTGCAATTGTCATCGGTGCAGCTTATTA CGCTTGGAGTAACAAGGTATTTAGCGACACTACCGAAAAAATAACCCCAACAATAAAGTCATCGATAGGGAATATCATAA AACCTATTGAAATTTCTACAATTGAAACATACTATTTTACAAATCTTGATTTAAATGGAGATTCCCGGATAACAAATAAC CCAGAGGAGCGATTTATTCAAACAATAAAATTAGAATTTATAAACAATATTGATGAAGATTTAAATGTAAATACAAGAAT ATACTGCTTAACTCCAAATGTTTCCTGGGCATCAGTAAATATAGATGATAGCAGTAACAATTTATTGTTGGATAGAGATG AAAACCCTTACAATTATAGCGGACAATATGTTTATTTTAATGGAACAGTGTATTATTCCTCAATGAAATTTTATGATGAA AATGGAAAACTATTCTATGCTGCTGCTTCTAATGGAAACGCATTGAATACTTCAAATTTGCTTGATTTAATTGATTTAAA TTGTCCAACAGAGAGTTTTTTATTGAAGGGGAATTCTAAAACAGATATAAATTATTACATCCTAATAAATAATACAAAAG TTCCAAATACAATAATATTTGAAATCATTGCTTCAACGAAATATGGAGACGTAGAGAAAAAAATAACATTTGAAATTAGT TAA
Upstream 100 bases:
>100_bases ATTAATAAATTTTTTATAGTTAAGATAATCTTAAATATCATAAAATTTACTTTATTGCCCATATACATAAACACTTACAT AAACTTAATGGTGAAGTTTA
Downstream 100 bases:
>100_bases AAAGGTGATAGTATGAAAAAGGCAATTTATTTGTTAATTTTATGTATTTTTGGATTATTCTCTGTTTATTTTACTTATGC TGAGAATATTTCAGATATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MNKSGMSLIITMLLLIGTAIVIGAAYYAWSNKVFSDTTEKITPTIKSSIGNIIKPIEISTIETYYFTNLDLNGDSRITNN PEERFIQTIKLEFINNIDEDLNVNTRIYCLTPNVSWASVNIDDSSNNLLLDRDENPYNYSGQYVYFNGTVYYSSMKFYDE NGKLFYAAASNGNALNTSNLLDLIDLNCPTESFLLKGNSKTDINYYILINNTKVPNTIIFEIIASTKYGDVEKKITFEIS
Sequences:
>Translated_240_residues MNKSGMSLIITMLLLIGTAIVIGAAYYAWSNKVFSDTTEKITPTIKSSIGNIIKPIEISTIETYYFTNLDLNGDSRITNN PEERFIQTIKLEFINNIDEDLNVNTRIYCLTPNVSWASVNIDDSSNNLLLDRDENPYNYSGQYVYFNGTVYYSSMKFYDE NGKLFYAAASNGNALNTSNLLDLIDLNCPTESFLLKGNSKTDINYYILINNTKVPNTIIFEIIASTKYGDVEKKITFEIS >Mature_240_residues MNKSGMSLIITMLLLIGTAIVIGAAYYAWSNKVFSDTTEKITPTIKSSIGNIIKPIEISTIETYYFTNLDLNGDSRITNN PEERFIQTIKLEFINNIDEDLNVNTRIYCLTPNVSWASVNIDDSSNNLLLDRDENPYNYSGQYVYFNGTVYYSSMKFYDE NGKLFYAAASNGNALNTSNLLDLIDLNCPTESFLLKGNSKTDINYYILINNTKVPNTIIFEIIASTKYGDVEKKITFEIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1291_METJA (Q58687)
Other databases:
- EMBL: L77117 - PIR: B64461 - RefSeq: NP_248290.1 - ProteinModelPortal: Q58687 - GeneID: 1452192 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1291 - NMPDR: fig|243232.1.peg.1327 - TIGR: MJ1291 - OMA: WASVNID - ProtClustDB: CLSK2517717 - BioCyc: MJAN243232:MJ_1291-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27112; Mature: 27112
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSGMSLIITMLLLIGTAIVIGAAYYAWSNKVFSDTTEKITPTIKSSIGNIIKPIEIST CCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCEECCCHHHCCHHHHHHHCHHCCCEEEEE IETYYFTNLDLNGDSRITNNPEERFIQTIKLEFINNIDEDLNVNTRIYCLTPNVSWASVN EEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEE IDDSSNNLLLDRDENPYNYSGQYVYFNGTVYYSSMKFYDENGKLFYAAASNGNALNTSNL ECCCCCCEEEECCCCCCCCCCEEEEECCEEEEEEEEEECCCCCEEEEECCCCCEECCCCC LDLIDLNCPTESFLLKGNSKTDINYYILINNTKVPNTIIFEIIASTKYGDVEKKITFEIS EEEEECCCCCHHEEEECCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEEEC >Mature Secondary Structure MNKSGMSLIITMLLLIGTAIVIGAAYYAWSNKVFSDTTEKITPTIKSSIGNIIKPIEIST CCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCEECCCHHHCCHHHHHHHCHHCCCEEEEE IETYYFTNLDLNGDSRITNNPEERFIQTIKLEFINNIDEDLNVNTRIYCLTPNVSWASVN EEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEE IDDSSNNLLLDRDENPYNYSGQYVYFNGTVYYSSMKFYDENGKLFYAAASNGNALNTSNL ECCCCCCEEEECCCCCCCCCCEEEEECCEEEEEEEEEECCCCCEEEEECCCCCEECCCCC LDLIDLNCPTESFLLKGNSKTDINYYILINNTKVPNTIIFEIIASTKYGDVEKKITFEIS EEEEECCCCCHHEEEECCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087