Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669473

Identifier: 15669473

GI number: 15669473

Start: 1232023

End: 1232577

Strand: Reverse

Name: 15669473

Synonym: MJ1285

Alternate gene names: NA

Gene position: 1232577-1232023 (Counterclockwise)

Preceding gene: 15669474

Following gene: 15669472

Centisome position: 74.03

GC content: 26.49

Gene sequence:

>555_bases
ATGGAATTGGACTATTTACTTGCAACAGCCATGTTTTTAATTGTATGTGTCTATGTTATATCTGAAACCGTTAATTTACA
TAGTGTTTATGATATTGAAGAAGCTAAAAAAGAGTTTTTAATGTATTATAATGATTTAAAATATAATTATTCAATTTCAA
AGGGAGATTTAATTTTTAATTTTAAAGTTAATAAAATAGGATATGTTATTGAGGGATTTGTATTCAAAGACACATCTGAA
AGTAGAGAGTTAATAAAGTATCTTGAAAACTTGAATGGCTCATACATTATTGCATACTCCCCTTCTAAGGATGAATTCAT
TATAACAAAAAATCATGAGTTTTTAAGAATTATAGGGCATTATAATATTTCTGCAAAATACAAAAAAGGAGAGTATGGGG
ATATTGAGATAATATATCCAAAAAACTATTCTATCAACTATAGGGAATTCCAAGGTATTAGTTGTAATAAGTTGTTTGAA
GTTCCGTTCTATATAGTTGATAAAAATGAAAACATAACTCTCAAATACTACGGCATTTTAGAAGTGGGAAGATGA

Upstream 100 bases:

>100_bases
AATACTTACTGAGAGGTCGATTATTGCTGGAATAAAGCATATATTACTAATGTTGATTGTTGGATATATGCTGTTTAAAT
TTTACATTGGGGGATAATAA

Downstream 100 bases:

>100_bases
TACTTAACAATAAAGGGTTTATTAGAATCTTAGAAGCTACAATTGCAGGTATTATGGTTATATTAGTTTTTTCTTATTTG
GTAATGTCCCAGAATTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MELDYLLATAMFLIVCVYVISETVNLHSVYDIEEAKKEFLMYYNDLKYNYSISKGDLIFNFKVNKIGYVIEGFVFKDTSE
SRELIKYLENLNGSYIIAYSPSKDEFIITKNHEFLRIIGHYNISAKYKKGEYGDIEIIYPKNYSINYREFQGISCNKLFE
VPFYIVDKNENITLKYYGILEVGR

Sequences:

>Translated_184_residues
MELDYLLATAMFLIVCVYVISETVNLHSVYDIEEAKKEFLMYYNDLKYNYSISKGDLIFNFKVNKIGYVIEGFVFKDTSE
SRELIKYLENLNGSYIIAYSPSKDEFIITKNHEFLRIIGHYNISAKYKKGEYGDIEIIYPKNYSINYREFQGISCNKLFE
VPFYIVDKNENITLKYYGILEVGR
>Mature_184_residues
MELDYLLATAMFLIVCVYVISETVNLHSVYDIEEAKKEFLMYYNDLKYNYSISKGDLIFNFKVNKIGYVIEGFVFKDTSE
SRELIKYLENLNGSYIIAYSPSKDEFIITKNHEFLRIIGHYNISAKYKKGEYGDIEIIYPKNYSINYREFQGISCNKLFE
VPFYIVDKNENITLKYYGILEVGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1285_METJA (Q58681)

Other databases:

- EMBL:   L77117
- PIR:   D64460
- RefSeq:   NP_248283.1
- GeneID:   1452185
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1285
- NMPDR:   fig|243232.1.peg.1320
- TIGR:   MJ1285
- OMA:   SYIIAYS
- ProtClustDB:   CLSK2517712
- BioCyc:   MJAN243232:MJ_1285-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21715; Mature: 21715

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe2c352c)-;

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELDYLLATAMFLIVCVYVISETVNLHSVYDIEEAKKEFLMYYNDLKYNYSISKGDLIFN
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHEEEEECEEEEEEECCCCEEEE
FKVNKIGYVIEGFVFKDTSESRELIKYLENLNGSYIIAYSPSKDEFIITKNHEFLRIIGH
EEECCCCEEEEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCEEEEEEE
YNISAKYKKGEYGDIEIIYPKNYSINYREFQGISCNKLFEVPFYIVDKNENITLKYYGIL
CCEEEEECCCCCCCEEEEECCCCCCCHHEECCCCCCEEEECCEEEEECCCCEEEEEEEEE
EVGR
EECH
>Mature Secondary Structure
MELDYLLATAMFLIVCVYVISETVNLHSVYDIEEAKKEFLMYYNDLKYNYSISKGDLIFN
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHEEEEECEEEEEEECCCCEEEE
FKVNKIGYVIEGFVFKDTSESRELIKYLENLNGSYIIAYSPSKDEFIITKNHEFLRIIGH
EEECCCCEEEEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCEEEEEEE
YNISAKYKKGEYGDIEIIYPKNYSINYREFQGISCNKLFEVPFYIVDKNENITLKYYGIL
CCEEEEECCCCCCCEEEEECCCCCCCHHEECCCCCCEEEECCEEEEECCCCEEEEEEEEE
EVGR
EECH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087