| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669473
Identifier: 15669473
GI number: 15669473
Start: 1232023
End: 1232577
Strand: Reverse
Name: 15669473
Synonym: MJ1285
Alternate gene names: NA
Gene position: 1232577-1232023 (Counterclockwise)
Preceding gene: 15669474
Following gene: 15669472
Centisome position: 74.03
GC content: 26.49
Gene sequence:
>555_bases ATGGAATTGGACTATTTACTTGCAACAGCCATGTTTTTAATTGTATGTGTCTATGTTATATCTGAAACCGTTAATTTACA TAGTGTTTATGATATTGAAGAAGCTAAAAAAGAGTTTTTAATGTATTATAATGATTTAAAATATAATTATTCAATTTCAA AGGGAGATTTAATTTTTAATTTTAAAGTTAATAAAATAGGATATGTTATTGAGGGATTTGTATTCAAAGACACATCTGAA AGTAGAGAGTTAATAAAGTATCTTGAAAACTTGAATGGCTCATACATTATTGCATACTCCCCTTCTAAGGATGAATTCAT TATAACAAAAAATCATGAGTTTTTAAGAATTATAGGGCATTATAATATTTCTGCAAAATACAAAAAAGGAGAGTATGGGG ATATTGAGATAATATATCCAAAAAACTATTCTATCAACTATAGGGAATTCCAAGGTATTAGTTGTAATAAGTTGTTTGAA GTTCCGTTCTATATAGTTGATAAAAATGAAAACATAACTCTCAAATACTACGGCATTTTAGAAGTGGGAAGATGA
Upstream 100 bases:
>100_bases AATACTTACTGAGAGGTCGATTATTGCTGGAATAAAGCATATATTACTAATGTTGATTGTTGGATATATGCTGTTTAAAT TTTACATTGGGGGATAATAA
Downstream 100 bases:
>100_bases TACTTAACAATAAAGGGTTTATTAGAATCTTAGAAGCTACAATTGCAGGTATTATGGTTATATTAGTTTTTTCTTATTTG GTAATGTCCCAGAATTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MELDYLLATAMFLIVCVYVISETVNLHSVYDIEEAKKEFLMYYNDLKYNYSISKGDLIFNFKVNKIGYVIEGFVFKDTSE SRELIKYLENLNGSYIIAYSPSKDEFIITKNHEFLRIIGHYNISAKYKKGEYGDIEIIYPKNYSINYREFQGISCNKLFE VPFYIVDKNENITLKYYGILEVGR
Sequences:
>Translated_184_residues MELDYLLATAMFLIVCVYVISETVNLHSVYDIEEAKKEFLMYYNDLKYNYSISKGDLIFNFKVNKIGYVIEGFVFKDTSE SRELIKYLENLNGSYIIAYSPSKDEFIITKNHEFLRIIGHYNISAKYKKGEYGDIEIIYPKNYSINYREFQGISCNKLFE VPFYIVDKNENITLKYYGILEVGR >Mature_184_residues MELDYLLATAMFLIVCVYVISETVNLHSVYDIEEAKKEFLMYYNDLKYNYSISKGDLIFNFKVNKIGYVIEGFVFKDTSE SRELIKYLENLNGSYIIAYSPSKDEFIITKNHEFLRIIGHYNISAKYKKGEYGDIEIIYPKNYSINYREFQGISCNKLFE VPFYIVDKNENITLKYYGILEVGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1285_METJA (Q58681)
Other databases:
- EMBL: L77117 - PIR: D64460 - RefSeq: NP_248283.1 - GeneID: 1452185 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1285 - NMPDR: fig|243232.1.peg.1320 - TIGR: MJ1285 - OMA: SYIIAYS - ProtClustDB: CLSK2517712 - BioCyc: MJAN243232:MJ_1285-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21715; Mature: 21715
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xe2c352c)-;
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELDYLLATAMFLIVCVYVISETVNLHSVYDIEEAKKEFLMYYNDLKYNYSISKGDLIFN CCHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHEEEEECEEEEEEECCCCEEEE FKVNKIGYVIEGFVFKDTSESRELIKYLENLNGSYIIAYSPSKDEFIITKNHEFLRIIGH EEECCCCEEEEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCEEEEEEE YNISAKYKKGEYGDIEIIYPKNYSINYREFQGISCNKLFEVPFYIVDKNENITLKYYGIL CCEEEEECCCCCCCEEEEECCCCCCCHHEECCCCCCEEEECCEEEEECCCCEEEEEEEEE EVGR EECH >Mature Secondary Structure MELDYLLATAMFLIVCVYVISETVNLHSVYDIEEAKKEFLMYYNDLKYNYSISKGDLIFN CCHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHEEEEECEEEEEEECCCCEEEE FKVNKIGYVIEGFVFKDTSESRELIKYLENLNGSYIIAYSPSKDEFIITKNHEFLRIIGH EEECCCCEEEEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCEEEEEEE YNISAKYKKGEYGDIEIIYPKNYSINYREFQGISCNKLFEVPFYIVDKNENITLKYYGIL CCEEEEECCCCCCCEEEEECCCCCCCHHEECCCCCCEEEECCEEEEECCCCEEEEEEEEE EVGR EECH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087