| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669465
Identifier: 15669465
GI number: 15669465
Start: 1223718
End: 1224275
Strand: Reverse
Name: 15669465
Synonym: MJ1279
Alternate gene names: NA
Gene position: 1224275-1223718 (Counterclockwise)
Preceding gene: 15669469
Following gene: 15669464
Centisome position: 73.53
GC content: 29.21
Gene sequence:
>558_bases TTGGTGATTTTAATGGATAAGAGGTTTATAGAATTAATAAAAAAAGGTTGGAAATTAAAAAATGAAGAAAATAAAGCAAC ATATATTGATGAAGTTTTTTTAGGGGCAATAATAACAACATTAACTGACAATGGATATGTTTTAATGGACATCGCTTCAA ATGGAAACTTCCATTACTTTATGTTTGAACATTTAGAAAGCTGGGATAGAATAAAAATAGTTGCTGAAGTGCTTCCCCAC TCATTAACAGATGTCAAAGTTATAGGGGCGAGGATGTTTATTGAATTTTCTTATGGGGTTATGATTAAAGGAATCCCACC ATCCTTATTTGGTTTAGGATTAAAAGGATACCTATCTCAAATGCTATCAAACATTGGAAGTATTAGATATGAGTATGATG GTTATTATACTTTTGTAAATTGTGCAACTTATTTGCTAATAAACGATTACATTGACTTTGACACGCTAACGATTGATTGG GAAAAACTAAATAATGATATAAATGCAATAATATCCTCTCTTGCTAAATATTTAGAAATTCATAAAAAGGTGGAATAA
Upstream 100 bases:
>100_bases AATACAGTAGAAATTTTTATATAGTTGAATGGATACCTAATAAATACTTTAAAATTATTTCTATAAATAGTTTAAAGTAT TAAAAATTTTATTATGGCAA
Downstream 100 bases:
>100_bases ATGGGAATTTTTGATTTAGCTAAAAAAATAACTCATTCAAGAGAATACACTAAGAGCATTGACGAGATATTCGTTGGTGA GTTAATAAATTTTATGTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MVILMDKRFIELIKKGWKLKNEENKATYIDEVFLGAIITTLTDNGYVLMDIASNGNFHYFMFEHLESWDRIKIVAEVLPH SLTDVKVIGARMFIEFSYGVMIKGIPPSLFGLGLKGYLSQMLSNIGSIRYEYDGYYTFVNCATYLLINDYIDFDTLTIDW EKLNNDINAIISSLAKYLEIHKKVE
Sequences:
>Translated_185_residues MVILMDKRFIELIKKGWKLKNEENKATYIDEVFLGAIITTLTDNGYVLMDIASNGNFHYFMFEHLESWDRIKIVAEVLPH SLTDVKVIGARMFIEFSYGVMIKGIPPSLFGLGLKGYLSQMLSNIGSIRYEYDGYYTFVNCATYLLINDYIDFDTLTIDW EKLNNDINAIISSLAKYLEIHKKVE >Mature_185_residues MVILMDKRFIELIKKGWKLKNEENKATYIDEVFLGAIITTLTDNGYVLMDIASNGNFHYFMFEHLESWDRIKIVAEVLPH SLTDVKVIGARMFIEFSYGVMIKGIPPSLFGLGLKGYLSQMLSNIGSIRYEYDGYYTFVNCATYLLINDYIDFDTLTIDW EKLNNDINAIISSLAKYLEIHKKVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1279_METJA (Q58675)
Other databases:
- EMBL: L77117 - PIR: F64459 - RefSeq: NP_248275.1 - ProteinModelPortal: Q58675 - GeneID: 1452177 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1279 - NMPDR: fig|243232.1.peg.1312 - TIGR: MJ1279 - ProtClustDB: CLSK2749973 - BioCyc: MJAN243232:MJ_1279-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21379; Mature: 21379
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVILMDKRFIELIKKGWKLKNEENKATYIDEVFLGAIITTLTDNGYVLMDIASNGNFHYF CEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEE MFEHLESWDRIKIVAEVLPHSLTDVKVIGARMFIEFSYGVMIKGIPPSLFGLGLKGYLSQ EEHHCCCHHHHHHHHHHCCCCCCHHHEEHHEEEEEEECCEEEECCCHHHHHCCHHHHHHH MLSNIGSIRYEYDGYYTFVNCATYLLINDYIDFDTLTIDWEKLNNDINAIISSLAKYLEI HHHHHCCEEEEECCEEEHHHHHHHHHHHCCCCCCEEEEEHHHHCCHHHHHHHHHHHHHHH HKKVE HHCCC >Mature Secondary Structure MVILMDKRFIELIKKGWKLKNEENKATYIDEVFLGAIITTLTDNGYVLMDIASNGNFHYF CEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEE MFEHLESWDRIKIVAEVLPHSLTDVKVIGARMFIEFSYGVMIKGIPPSLFGLGLKGYLSQ EEHHCCCHHHHHHHHHHCCCCCCHHHEEHHEEEEEEECCEEEECCCHHHHHCCHHHHHHH MLSNIGSIRYEYDGYYTFVNCATYLLINDYIDFDTLTIDWEKLNNDINAIISSLAKYLEI HHHHHCCEEEEECCEEEHHHHHHHHHHHCCCCCCEEEEEHHHHCCHHHHHHHHHHHHHHH HKKVE HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087