| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669464
Identifier: 15669464
GI number: 15669464
Start: 1223178
End: 1223717
Strand: Reverse
Name: 15669464
Synonym: MJ1278
Alternate gene names: NA
Gene position: 1223717-1223178 (Counterclockwise)
Preceding gene: 15669465
Following gene: 15669463
Centisome position: 73.5
GC content: 28.15
Gene sequence:
>540_bases ATGGGAATTTTTGATTTAGCTAAAAAAATAACTCATTCAAGAGAATACACTAAGAGCATTGACGAGATATTCGTTGGTGA GTTAATAAATTTTATGTATAAAAATGGAGCTGTTTTAACAGAAATTAACTCACCAACAGAAAGCTCTCACAGCTTAACCT TCAAATTTGTAAATCATCCGGTCTTACACATACTTAGGATTACGGTAGATAGAAAAATTGAGGGGATGGCGTCAAAAATT CTTGGTTCTCAGTCAGTTTTAACATTTGAAGCAGTAATTAAAAATGACTTGGTTGAACCAAATGATGTTTTAGTTATGTA TCAAACTGATTTTAAAAATATGTTTAAAATTCCAATATTTGGAAAAGTTAAAATAAATCATGATTTGAACTACATAATAG CAACAACAACATATATTGAAGATTTAGGAAAATATATAAAATCAGATAGAATAGAAAAAGAAGCCCTTAGGGAAGAATTG GAGAAGATATTAAATACATTAGTTAAACATTTAGAGCCATTAAAAAAGAAGTTTGACTAA
Upstream 100 bases:
>100_bases TGACACGCTAACGATTGATTGGGAAAAACTAAATAATGATATAAATGCAATAATATCCTCTCTTGCTAAATATTTAGAAA TTCATAAAAAGGTGGAATAA
Downstream 100 bases:
>100_bases TGTTATTTCTATTTTCTTATATTTAGATTTTCATATTAAACAATACAGAAAACAAAACTTATTTATTCACTTACTTTTTA TTTTAGTTATAATCTACATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MGIFDLAKKITHSREYTKSIDEIFVGELINFMYKNGAVLTEINSPTESSHSLTFKFVNHPVLHILRITVDRKIEGMASKI LGSQSVLTFEAVIKNDLVEPNDVLVMYQTDFKNMFKIPIFGKVKINHDLNYIIATTTYIEDLGKYIKSDRIEKEALREEL EKILNTLVKHLEPLKKKFD
Sequences:
>Translated_179_residues MGIFDLAKKITHSREYTKSIDEIFVGELINFMYKNGAVLTEINSPTESSHSLTFKFVNHPVLHILRITVDRKIEGMASKI LGSQSVLTFEAVIKNDLVEPNDVLVMYQTDFKNMFKIPIFGKVKINHDLNYIIATTTYIEDLGKYIKSDRIEKEALREEL EKILNTLVKHLEPLKKKFD >Mature_178_residues GIFDLAKKITHSREYTKSIDEIFVGELINFMYKNGAVLTEINSPTESSHSLTFKFVNHPVLHILRITVDRKIEGMASKIL GSQSVLTFEAVIKNDLVEPNDVLVMYQTDFKNMFKIPIFGKVKINHDLNYIIATTTYIEDLGKYIKSDRIEKEALREELE KILNTLVKHLEPLKKKFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1278_METJA (Q58674)
Other databases:
- EMBL: L77117 - PIR: E64459 - RefSeq: NP_248274.1 - ProteinModelPortal: Q58674 - GeneID: 1452176 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1278 - NMPDR: fig|243232.1.peg.1311 - TIGR: MJ1278 - ProtClustDB: CLSK2749972 - BioCyc: MJAN243232:MJ_1278-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20662; Mature: 20531
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIFDLAKKITHSREYTKSIDEIFVGELINFMYKNGAVLTEINSPTESSHSLTFKFVNHP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEECCCH VLHILRITVDRKIEGMASKILGSQSVLTFEAVIKNDLVEPNDVLVMYQTDFKNMFKIPIF HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEECCCE GKVKINHDLNYIIATTTYIEDLGKYIKSDRIEKEALREELEKILNTLVKHLEPLKKKFD EEEEECCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GIFDLAKKITHSREYTKSIDEIFVGELINFMYKNGAVLTEINSPTESSHSLTFKFVNHP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEECCCH VLHILRITVDRKIEGMASKILGSQSVLTFEAVIKNDLVEPNDVLVMYQTDFKNMFKIPIF HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEECCCE GKVKINHDLNYIIATTTYIEDLGKYIKSDRIEKEALREELEKILNTLVKHLEPLKKKFD EEEEECCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087