| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15669418
Identifier: 15669418
GI number: 15669418
Start: 1176445
End: 1177311
Strand: Direct
Name: 15669418
Synonym: MJ1233
Alternate gene names: NA
Gene position: 1176445-1177311 (Clockwise)
Preceding gene: 15669412
Following gene: 15669424
Centisome position: 70.66
GC content: 32.18
Gene sequence:
>867_bases TTGAGTAAAATTACTTTGGTGCTAACTATGAATTACATAACCTCAAAAATAGCTAAGGAAATTTTAAATTCACAATCTGA GGAGATTTTTTTAAATTTGGATTTAAATAAGACAGAAAAGAAAGAAAAGATTTTGATAGATAGGGAAAAAAAGATTGCCA AATTTCCTGAAGGAGATGTTAGCTTTGACATTTTAAAGAAGATTGCCAAGGATGAGGGGCATATATACTTTATAAAAGAT GGAGAAGTTTTTAAAGCTGCAATATCAAATAACGGCTATTATAAGTTAGTTCCAACAATTCCACCAACAATTGAGATAAA TGGAATAAGAATGCATAGAACTAAAGAAGTTAATCCTTATGAAGATACACTAAATAAGATAAATGCCGTAAAAGTAAAGA AGGGAGAAAAAGTTTTAGATACCTGCATGGGTTTGGGTTATACAGCTATAGAGGCGTATAGAAGAGGAGCTGAAGTTATA ACTATAGAAAAAAATCCAAATGTTTTAGAATTAGCTAAAATAAACCCTTATAGTGAAGAGCTGTTTAAAGGAGGCATTAA AATTATTTTAGGAGATGCTTATGATGTCATAAAGAGATTTAAAGATGAGGAGTTTGATGTTGTTATCCACGACCCTCCAA GGTTCAGCTTAGCTGGACATCTATACAGCGAAGAATTCTATAAAGAAATTTTTAGAGTTTTAAAGCCGGGAGGAAGATTG TTTCATTATGTTGGTAATCCAGGAAAGAAGTATAGAGGAAAGGATTTACAGAAGGGAGTTATGGAGAGGTTGAGGAAAGT TGGATTTGTAAATGTTAAAAGGGTTGAAGAAGCGTTGGGAGTTGTTGCTGTAAAACCAAGAGATTAA
Upstream 100 bases:
>100_bases TTAAAAATACTAATGATTATAAATTATAATAGATTATTGACATCCATGATAAATATTTATGGCAATAAAATAAATATATA CTTATCGATTTAATTCAGAA
Downstream 100 bases:
>100_bases GCTTTCTATTTTTTTAATTTAAACAATCAAAAGAGAAATATTATTTTGCTTTTTTTAATAAATTTAAAAAATTAAGTTTA ATGTTTTATTTTTATACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MSKITLVLTMNYITSKIAKEILNSQSEEIFLNLDLNKTEKKEKILIDREKKIAKFPEGDVSFDILKKIAKDEGHIYFIKD GEVFKAAISNNGYYKLVPTIPPTIEINGIRMHRTKEVNPYEDTLNKINAVKVKKGEKVLDTCMGLGYTAIEAYRRGAEVI TIEKNPNVLELAKINPYSEELFKGGIKIILGDAYDVIKRFKDEEFDVVIHDPPRFSLAGHLYSEEFYKEIFRVLKPGGRL FHYVGNPGKKYRGKDLQKGVMERLRKVGFVNVKRVEEALGVVAVKPRD
Sequences:
>Translated_288_residues MSKITLVLTMNYITSKIAKEILNSQSEEIFLNLDLNKTEKKEKILIDREKKIAKFPEGDVSFDILKKIAKDEGHIYFIKD GEVFKAAISNNGYYKLVPTIPPTIEINGIRMHRTKEVNPYEDTLNKINAVKVKKGEKVLDTCMGLGYTAIEAYRRGAEVI TIEKNPNVLELAKINPYSEELFKGGIKIILGDAYDVIKRFKDEEFDVVIHDPPRFSLAGHLYSEEFYKEIFRVLKPGGRL FHYVGNPGKKYRGKDLQKGVMERLRKVGFVNVKRVEEALGVVAVKPRD >Mature_287_residues SKITLVLTMNYITSKIAKEILNSQSEEIFLNLDLNKTEKKEKILIDREKKIAKFPEGDVSFDILKKIAKDEGHIYFIKDG EVFKAAISNNGYYKLVPTIPPTIEINGIRMHRTKEVNPYEDTLNKINAVKVKKGEKVLDTCMGLGYTAIEAYRRGAEVIT IEKNPNVLELAKINPYSEELFKGGIKIILGDAYDVIKRFKDEEFDVVIHDPPRFSLAGHLYSEEFYKEIFRVLKPGGRLF HYVGNPGKKYRGKDLQKGVMERLRKVGFVNVKRVEEALGVVAVKPRD
Specific function: Unknown
COG id: COG2521
COG function: function code R; Predicted archaeal methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1233_METJA (Q58630)
Other databases:
- EMBL: L77117 - PIR: H64453 - RefSeq: NP_248228.1 - ProteinModelPortal: Q58630 - SMR: Q58630 - GeneID: 1452129 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1233 - NMPDR: fig|243232.1.peg.1265 - TIGR: MJ1233 - HOGENOM: HBG701274 - OMA: GIRMHRT - ProtClustDB: CLSK2299138 - BioCyc: MJAN243232:MJ_1233-MONOMER - InterPro: IPR013216
Pfam domain/function: PF08241 Methyltransf_11
EC number: NA
Molecular weight: Translated: 32913; Mature: 32782
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKITLVLTMNYITSKIAKEILNSQSEEIFLNLDLNKTEKKEKILIDREKKIAKFPEGDV CCEEEEEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHEEEECCHHHHCCCCCCC SFDILKKIAKDEGHIYFIKDGEVFKAAISNNGYYKLVPTIPPTIEINGIRMHRTKEVNPY CHHHHHHHHCCCCCEEEEECCCEEEEEECCCCEEEEECCCCCEEEECCEEEECCCCCCCH EDTLNKINAVKVKKGEKVLDTCMGLGYTAIEAYRRGAEVITIEKNPNVLELAKINPYSEE HHHHHHCEEEEECCCHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCCEEEEEECCCCHHH LFKGGIKIILGDAYDVIKRFKDEEFDVVIHDPPRFSLAGHLYSEEFYKEIFRVLKPGGRL HHCCCEEEEECCHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEE FHYVGNPGKKYRGKDLQKGVMERLRKVGFVNVKRVEEALGVVAVKPRD EEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEEECCCC >Mature Secondary Structure SKITLVLTMNYITSKIAKEILNSQSEEIFLNLDLNKTEKKEKILIDREKKIAKFPEGDV CEEEEEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHEEEECCHHHHCCCCCCC SFDILKKIAKDEGHIYFIKDGEVFKAAISNNGYYKLVPTIPPTIEINGIRMHRTKEVNPY CHHHHHHHHCCCCCEEEEECCCEEEEEECCCCEEEEECCCCCEEEECCEEEECCCCCCCH EDTLNKINAVKVKKGEKVLDTCMGLGYTAIEAYRRGAEVITIEKNPNVLELAKINPYSEE HHHHHHCEEEEECCCHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCCEEEEEECCCCHHH LFKGGIKIILGDAYDVIKRFKDEEFDVVIHDPPRFSLAGHLYSEEFYKEIFRVLKPGGRL HHCCCEEEEECCHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEE FHYVGNPGKKYRGKDLQKGVMERLRKVGFVNVKRVEEALGVVAVKPRD EEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087