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The map label for this gene is 15669392

Identifier: 15669392

GI number: 15669392

Start: 1148669

End: 1149943

Strand: Reverse

Name: 15669392

Synonym: MJ1206

Alternate gene names: NA

Gene position: 1149943-1148669 (Counterclockwise)

Preceding gene: 298575367

Following gene: 15669391

Centisome position: 69.07

GC content: 32.0

Gene sequence:

>1275_bases
GTGATTATTATGGATTTAGGAACTACTAAGTATATCATTTATGCAGAACTCATTGCTGATGGTTATGTTGAAAAACATGA
TGTTATTGGAGCAATATTTGGGCAGACGGAAGGGTTGTTAGGGGATGAGTTAGATTTGAGAGAACTACAAAAAACGGGAA
GAGTTGGAAGGATAGATGTAGAGCTAACCAATATTAATGGAAAGTCAATAGCCAAAATAACAGTCCCATCAAGTTTGGAT
AGGATTGAAACCTCTATATTAGCTGCCACTTTAGAAACAATTGATAGAGTAGGACCATGTGTAGCAACAGTTAAAGTAAT
AGATATTGAGGACATTAGGAAAAAGAAGAGAGAATACATAGTTGAAAGAGCTAAGGAAATATTGAAGCAGTTGATGAGCA
ACATAGATGTGAATACAATTATTGAAGAAGTCAAAGAAAGTGTAAGAATGGGAGAAATTATTGAATATGGCCCTGAGAGA
TTGCCAGCAGGTCCTGCAGTAGATAGTTCAGACGATATTATAGTTGTTGAGGGAAGGGCAGATGTTTTAAACTTATTGAG
GTGTGGCATTAAGAATGTGATAGCTGTTGAAGGAACCTCTGTCCCTAAAACTATCATAGAGCTTAGTAAGAAAAAGATAG
TAACTGTCTTTACAGATGGAGATAGAGGAGGAGAACTGATTTTAAAAGAGTTACTACAAGTTTGTGATGTTGATTTTGTG
GCAAGAGCTCCACCAGGAAAGGAAGTTGAAGAGTTATCTAAAAAAGAAATTATGAAATGTTTAAGAAGTAAAATCCCTGC
TGAGCATATATTGGCTCAAATATTAAAGGATAAACAAAAAATTGATGAAAAAGTATGTAAAGATGAAATTAGAAATATGG
GGATTCAAACAATACCAGAAATAAAACCTGAAATAAGTATAACATCTAATGATGATGTGGAAGTTTCAAGTGTTGAGTGT
AATCCATCTAATAATGAAGAACTACCACCTAAATATAACAAATACCGAAAGTTTTATGAAAAACTTATTGAATTAGAAGA
TTCTAAAGTGTTAATTATTAATGGGGATAAAGAGGAAATTGTTAGTATTGAGGAGTTAATTAATAATACAGATAACTATA
AATCTATTGACGCAATTATAATTAATGGGACAGTTACTCAAAAACTTATAGACATCTTATATGAAAAGACAAATTTAATT
TTCTGTAAAGATGCAAAAATCATAAAAAAGCCAGTTAATTTAACACTCATCACTTTCGGTGATTTAAATGCATAA

Upstream 100 bases:

>100_bases
GTCAAAATAAAAATAATTTTTTATACTTTGATTTGTTTTATTAGATTATGTTAGATATTGTGAGATTACTCTCACTCATG
AGACTGGTAGAATTTTACTG

Downstream 100 bases:

>100_bases
AGATGAGCTGATTCAATTACACCAACTCCTTATCTATTTAAGAAAATATATCGAAAAAAAATATAATTGCGACAATAACG
AATTTAAAGAGTATGATGAG

Product: DNA primase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MIIMDLGTTKYIIYAELIADGYVEKHDVIGAIFGQTEGLLGDELDLRELQKTGRVGRIDVELTNINGKSIAKITVPSSLD
RIETSILAATLETIDRVGPCVATVKVIDIEDIRKKKREYIVERAKEILKQLMSNIDVNTIIEEVKESVRMGEIIEYGPER
LPAGPAVDSSDDIIVVEGRADVLNLLRCGIKNVIAVEGTSVPKTIIELSKKKIVTVFTDGDRGGELILKELLQVCDVDFV
ARAPPGKEVEELSKKEIMKCLRSKIPAEHILAQILKDKQKIDEKVCKDEIRNMGIQTIPEIKPEISITSNDDVEVSSVEC
NPSNNEELPPKYNKYRKFYEKLIELEDSKVLIINGDKEEIVSIEELINNTDNYKSIDAIIINGTVTQKLIDILYEKTNLI
FCKDAKIIKKPVNLTLITFGDLNA

Sequences:

>Translated_424_residues
MIIMDLGTTKYIIYAELIADGYVEKHDVIGAIFGQTEGLLGDELDLRELQKTGRVGRIDVELTNINGKSIAKITVPSSLD
RIETSILAATLETIDRVGPCVATVKVIDIEDIRKKKREYIVERAKEILKQLMSNIDVNTIIEEVKESVRMGEIIEYGPER
LPAGPAVDSSDDIIVVEGRADVLNLLRCGIKNVIAVEGTSVPKTIIELSKKKIVTVFTDGDRGGELILKELLQVCDVDFV
ARAPPGKEVEELSKKEIMKCLRSKIPAEHILAQILKDKQKIDEKVCKDEIRNMGIQTIPEIKPEISITSNDDVEVSSVEC
NPSNNEELPPKYNKYRKFYEKLIELEDSKVLIINGDKEEIVSIEELINNTDNYKSIDAIIINGTVTQKLIDILYEKTNLI
FCKDAKIIKKPVNLTLITFGDLNA
>Mature_424_residues
MIIMDLGTTKYIIYAELIADGYVEKHDVIGAIFGQTEGLLGDELDLRELQKTGRVGRIDVELTNINGKSIAKITVPSSLD
RIETSILAATLETIDRVGPCVATVKVIDIEDIRKKKREYIVERAKEILKQLMSNIDVNTIIEEVKESVRMGEIIEYGPER
LPAGPAVDSSDDIIVVEGRADVLNLLRCGIKNVIAVEGTSVPKTIIELSKKKIVTVFTDGDRGGELILKELLQVCDVDFV
ARAPPGKEVEELSKKEIMKCLRSKIPAEHILAQILKDKQKIDEKVCKDEIRNMGIQTIPEIKPEISITSNDDVEVSSVEC
NPSNNEELPPKYNKYRKFYEKLIELEDSKVLIINGDKEEIVSIEELINNTDNYKSIDAIIINGTVTQKLIDILYEKTNLI
FCKDAKIIKKPVNLTLITFGDLNA

Specific function: Unknown

COG id: COG0358

COG function: function code L; DNA primase (bacterial type)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1206_METJA (Q58603)

Other databases:

- EMBL:   L77117
- PIR:   E64450
- RefSeq:   NP_248201.1
- ProteinModelPortal:   Q58603
- GeneID:   1452101
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1206
- NMPDR:   fig|243232.1.peg.1238
- TIGR:   MJ1206
- HOGENOM:   HBG541216
- OMA:   GRVGRID
- ProtClustDB:   PRK04031
- BioCyc:   MJAN243232:MJ_1206-MONOMER
- HAMAP:   MF_00007
- InterPro:   IPR006171
- InterPro:   IPR020607
- SMART:   SM00493

Pfam domain/function: PF01751 Toprim

EC number: NA

Molecular weight: Translated: 47389; Mature: 47389

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIMDLGTTKYIIYAELIADGYVEKHDVIGAIFGQTEGLLGDELDLRELQKTGRVGRIDV
CEEEECCCCEEEEEHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCEEEEE
ELTNINGKSIAKITVPSSLDRIETSILAATLETIDRVGPCVATVKVIDIEDIRKKKREYI
EEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEHHHHHHHHHHHH
VERAKEILKQLMSNIDVNTIIEEVKESVRMGEIIEYGPERLPAGPAVDSSDDIIVVEGRA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCH
DVLNLLRCGIKNVIAVEGTSVPKTIIELSKKKIVTVFTDGDRGGELILKELLQVCDVDFV
HHHHHHHHCHHCEEEECCCCCHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCE
ARAPPGKEVEELSKKEIMKCLRSKIPAEHILAQILKDKQKIDEKVCKDEIRNMGIQTIPE
ECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
IKPEISITSNDDVEVSSVECNPSNNEELPPKYNKYRKFYEKLIELEDSKVLIINGDKEEI
CCCCEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHH
VSIEELINNTDNYKSIDAIIINGTVTQKLIDILYEKTNLIFCKDAKIIKKPVNLTLITFG
HHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEECCCHHHHCCCCEEEEEEC
DLNA
CCCC
>Mature Secondary Structure
MIIMDLGTTKYIIYAELIADGYVEKHDVIGAIFGQTEGLLGDELDLRELQKTGRVGRIDV
CEEEECCCCEEEEEHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCEEEEE
ELTNINGKSIAKITVPSSLDRIETSILAATLETIDRVGPCVATVKVIDIEDIRKKKREYI
EEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEHHHHHHHHHHHH
VERAKEILKQLMSNIDVNTIIEEVKESVRMGEIIEYGPERLPAGPAVDSSDDIIVVEGRA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCH
DVLNLLRCGIKNVIAVEGTSVPKTIIELSKKKIVTVFTDGDRGGELILKELLQVCDVDFV
HHHHHHHHCHHCEEEECCCCCHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCE
ARAPPGKEVEELSKKEIMKCLRSKIPAEHILAQILKDKQKIDEKVCKDEIRNMGIQTIPE
ECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
IKPEISITSNDDVEVSSVECNPSNNEELPPKYNKYRKFYEKLIELEDSKVLIINGDKEEI
CCCCEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHH
VSIEELINNTDNYKSIDAIIINGTVTQKLIDILYEKTNLIFCKDAKIIKKPVNLTLITFG
HHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEECCCHHHHCCCCEEEEEEC
DLNA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087