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The map label for this gene is rpl24e

Identifier: 15669387

GI number: 15669387

Start: 1146277

End: 1146489

Strand: Reverse

Name: rpl24e

Synonym: MJ1201

Alternate gene names: 15669387

Gene position: 1146489-1146277 (Counterclockwise)

Preceding gene: 15669388

Following gene: 15669386

Centisome position: 68.86

GC content: 35.21

Gene sequence:

>213_bases
ATGCCAGAATGGAGAACATGCAGCTTTTGTGGTTATGAAATTGAGCCAGGAAAAGGAAAAATGGTCGTAGAAAAAGATGG
GACTGTATTATATTTCTGCTCATCCAAATGTGAGAAAAGCTACAGAATGGGAAGAAATCCAAGAAAATTAAAATGGACTA
AAGTCTATCAAGATATGAAGGCAGAGTTAAAGAAAGCTCAAGAATCACAATAA

Upstream 100 bases:

>100_bases
AGAAACAGAGAGAGAAGCAAGACCATTAGACAGAAGAAGATAAATAATTTAATCTTAAATTATTTTAAAATCACTGAAAC
ACTATTAAAGGGGGATAGCT

Downstream 100 bases:

>100_bases
GTTATTTGGCTTTTTTGGTATTTAATTTAAATTTTTAAATTTATTTTATTTTTTAAATAACCTTTTATTTTGGTGATAAT
GTTGAAATTTATTGATTTAT

Product: 50S ribosomal protein L24e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 69

Protein sequence:

>70_residues
MPEWRTCSFCGYEIEPGKGKMVVEKDGTVLYFCSSKCEKSYRMGRNPRKLKWTKVYQDMKAELKKAQESQ

Sequences:

>Translated_70_residues
MPEWRTCSFCGYEIEPGKGKMVVEKDGTVLYFCSSKCEKSYRMGRNPRKLKWTKVYQDMKAELKKAQESQ
>Mature_69_residues
PEWRTCSFCGYEIEPGKGKMVVEKDGTVLYFCSSKCEKSYRMGRNPRKLKWTKVYQDMKAELKKAQESQ

Specific function: Binds to the 23S rRNA

COG id: COG2075

COG function: function code J; Ribosomal protein L24E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L24e family

Homologues:

Organism=Saccharomyces cerevisiae, GI6323037, Length=51, Percent_Identity=49.0196078431373, Blast_Score=60, Evalue=6e-11,
Organism=Drosophila melanogaster, GI19921254, Length=51, Percent_Identity=52.9411764705882, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL24E_METJA (P54064)

Other databases:

- EMBL:   L77117
- PIR:   H64449
- RefSeq:   NP_248196.1
- ProteinModelPortal:   P54064
- SMR:   P54064
- GeneID:   1452096
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1201
- NMPDR:   fig|243232.1.peg.1233
- TIGR:   MJ1201
- HOGENOM:   HBG499845
- OMA:   GTGKMFV
- ProtClustDB:   PRK00807
- BioCyc:   MJAN243232:MJ_1201-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00773
- InterPro:   IPR000988
- InterPro:   IPR011017
- Gene3D:   G3DSA:2.30.170.20
- PANTHER:   PTHR10792
- SMART:   SM00746

Pfam domain/function: PF01246 Ribosomal_L24e

EC number: NA

Molecular weight: Translated: 8249; Mature: 8117

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS01073 RIBOSOMAL_L24E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.7 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
11.4 %Cys+Met (Translated Protein)
5.8 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
10.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEWRTCSFCGYEIEPGKGKMVVEKDGTVLYFCSSKCEKSYRMGRNPRKLKWTKVYQDMK
CCCCCCCCCCCCEECCCCCCEEEECCCCEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHH
AELKKAQESQ
HHHHHHCCCC
>Mature Secondary Structure 
PEWRTCSFCGYEIEPGKGKMVVEKDGTVLYFCSSKCEKSYRMGRNPRKLKWTKVYQDMK
CCCCCCCCCCCEECCCCCCEEEECCCCEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHH
AELKKAQESQ
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087