| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669386
Identifier: 15669386
GI number: 15669386
Start: 1145107
End: 1146207
Strand: Reverse
Name: 15669386
Synonym: MJ1200
Alternate gene names: NA
Gene position: 1146207-1145107 (Counterclockwise)
Preceding gene: 15669387
Following gene: 15669385
Centisome position: 68.84
GC content: 33.79
Gene sequence:
>1101_bases TTGGTGATAATGTTGAAATTTATTGATTTATTTTGTGGATGTGGGGGATTTTCAAGAGGGTTCGTGGAAGAGGGTTTTGA GCCATTGGTAGCTATAGAGTTAAATGAAGATGCCGCTTTTTCTTATGCATTAAATTTTAATGGTCAAATATATGAAAAAA TAAGACCTGGAGAATTCAAATTGAAAGAATTAAAGGGCTATGTTGGAATCTACCCATTCAAATTTCCTTTTGAAGAGGAA GATATAAAGTGGCTAAAAAGACTGGGAACACTAAATGAAAAAACCAAAAAATTAAGTCCTGTTGTTATTAATGATGATAT TAGAGAAATTCATGCAATTGAGATAGAAAAGTTCATCAAAAATAAAAAAGTAGATGTTATTATTGGCGGTCCTCCCTGTG AAGGTTATACAGGAGCTAATCCAAAGAGAGAGAAAAATCCTTATGATAGATTGTATAAAGACGAAACTGGAAGATTAGTT TTAGAATATATAAGGATTGTTGGAGATTTACAACCAAAAATATTTGTTATGGAAAATGTTCCTGGTATTAAAGAAGTTAG AGGGGCAATAATAAAAGAGTTTAGAGAAATTGGTTATGAGGACGTTTATTTCAACACTTTAAGAGCTGAAGATTACGGAA ATCCATCTGTTAGAAGAAGAGTTTTTGTTTCAAACATAGAAATTAACCCAGAAAAAACTCAGCCAAAAACTGTTATTGAG GCAATAGGAGATTTAATGTATAAAGGTAGAGATGTCCCAAATCATGAATTCGCCGCTCTACCTGCAAGGTTTAGGAAGAG AGTCCATAAATTAGGTTGGGGAGATGCATTTATCTATTTCAAAGGAGCCAATAGAAGGTTGGGGAATTATATAAGGTTGC ATCCACTTAAATTAGCTGAGACAGTTATGGGTAAGAGGTTCTTTATCCACCCTTATGAAGATAGATTATTGACACCAAGA GAACAGGCAAGGTTGATGAGTTATCCTGATTACCATCTATTCGCTGGAGGTATAAGAAGCTGTTATAATCAGATTGGGGA AAGTGTTCCTGTGGCTTTAAGTAGAGCTATAGCCAGGGTGATTAAAGAAAACTTAAAATAA
Upstream 100 bases:
>100_bases AGAGTTAAAGAAAGCTCAAGAATCACAATAAGTTATTTGGCTTTTTTGGTATTTAATTTAAATTTTTAAATTTATTTTAT TTTTTAAATAACCTTTTATT
Downstream 100 bases:
>100_bases AAAAATGAAAAATAAATAAAAAAATACAAAAAACTAAAAAGGTGAGAAAAATGTTTATTTGTTTGCATAACACATACAGT GCTAAGCAAGTAGAAGAGTT
Product: type II R/M system modification methyltransferase
Products: NA
Alternate protein names: Cytosine-specific methyltransferase MJ1200; M.MjaVIIP
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MVIMLKFIDLFCGCGGFSRGFVEEGFEPLVAIELNEDAAFSYALNFNGQIYEKIRPGEFKLKELKGYVGIYPFKFPFEEE DIKWLKRLGTLNEKTKKLSPVVINDDIREIHAIEIEKFIKNKKVDVIIGGPPCEGYTGANPKREKNPYDRLYKDETGRLV LEYIRIVGDLQPKIFVMENVPGIKEVRGAIIKEFREIGYEDVYFNTLRAEDYGNPSVRRRVFVSNIEINPEKTQPKTVIE AIGDLMYKGRDVPNHEFAALPARFRKRVHKLGWGDAFIYFKGANRRLGNYIRLHPLKLAETVMGKRFFIHPYEDRLLTPR EQARLMSYPDYHLFAGGIRSCYNQIGESVPVALSRAIARVIKENLK
Sequences:
>Translated_366_residues MVIMLKFIDLFCGCGGFSRGFVEEGFEPLVAIELNEDAAFSYALNFNGQIYEKIRPGEFKLKELKGYVGIYPFKFPFEEE DIKWLKRLGTLNEKTKKLSPVVINDDIREIHAIEIEKFIKNKKVDVIIGGPPCEGYTGANPKREKNPYDRLYKDETGRLV LEYIRIVGDLQPKIFVMENVPGIKEVRGAIIKEFREIGYEDVYFNTLRAEDYGNPSVRRRVFVSNIEINPEKTQPKTVIE AIGDLMYKGRDVPNHEFAALPARFRKRVHKLGWGDAFIYFKGANRRLGNYIRLHPLKLAETVMGKRFFIHPYEDRLLTPR EQARLMSYPDYHLFAGGIRSCYNQIGESVPVALSRAIARVIKENLK >Mature_366_residues MVIMLKFIDLFCGCGGFSRGFVEEGFEPLVAIELNEDAAFSYALNFNGQIYEKIRPGEFKLKELKGYVGIYPFKFPFEEE DIKWLKRLGTLNEKTKKLSPVVINDDIREIHAIEIEKFIKNKKVDVIIGGPPCEGYTGANPKREKNPYDRLYKDETGRLV LEYIRIVGDLQPKIFVMENVPGIKEVRGAIIKEFREIGYEDVYFNTLRAEDYGNPSVRRRVFVSNIEINPEKTQPKTVIE AIGDLMYKGRDVPNHEFAALPARFRKRVHKLGWGDAFIYFKGANRRLGNYIRLHPLKLAETVMGKRFFIHPYEDRLLTPR EQARLMSYPDYHLFAGGIRSCYNQIGESVPVALSRAIARVIKENLK
Specific function: Unknown
COG id: COG0270
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the C5-methyltransferase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MT52_METJA (Q58600)
Other databases:
- EMBL: L77117 - PIR: G64449 - RefSeq: NP_248195.1 - ProteinModelPortal: Q58600 - REBASE: 3906 - GeneID: 1452095 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1200 - NMPDR: fig|243232.1.peg.1232 - TIGR: MJ1200 - HOGENOM: HBG682358 - OMA: HAEDYGV - ProtClustDB: CLSK2749965 - BioCyc: MJAN243232:MJ_1200-MONOMER - BRENDA: 2.1.1.37 - InterPro: IPR001525 - PANTHER: PTHR10629 - PRINTS: PR00105 - TIGRFAMs: TIGR00675
Pfam domain/function: PF00145 DNA_methylase
EC number: =2.1.1.37
Molecular weight: Translated: 42270; Mature: 42270
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: PS00094 C5_MTASE_1; PS00095 C5_MTASE_2
Important sites: ACT_SITE 133-133
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIMLKFIDLFCGCGGFSRGFVEEGFEPLVAIELNEDAAFSYALNFNGQIYEKIRPGEFK CEEEEEHHHHHHCCCCCCCCHHHCCCCCEEEEEECCCCEEEEEEECCCEEEECCCCCCCH LKELKGYVGIYPFKFPFEEEDIKWLKRLGTLNEKTKKLSPVVINDDIREIHAIEIEKFIK HHHHCCCEEECCCCCCCCHHHHHHHHHHCCCCHHHHHCCCEEECCCHHHHHHHHHHHHHC NKKVDVIIGGPPCEGYTGANPKREKNPYDRLYKDETGRLVLEYIRIVGDLQPKIFVMENV CCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECC PGIKEVRGAIIKEFREIGYEDVYFNTLRAEDYGNPSVRRRVFVSNIEINPEKTQPKTVIE CCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHEEEEEEEEECCCCCCHHHHHH AIGDLMYKGRDVPNHEFAALPARFRKRVHKLGWGDAFIYFKGANRRLGNYIRLHPLKLAE HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECHHHHHH TVMGKRFFIHPYEDRLLTPREQARLMSYPDYHLFAGGIRSCYNQIGESVPVALSRAIARV HHHCCEEEECCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IKENLK HHHHCC >Mature Secondary Structure MVIMLKFIDLFCGCGGFSRGFVEEGFEPLVAIELNEDAAFSYALNFNGQIYEKIRPGEFK CEEEEEHHHHHHCCCCCCCCHHHCCCCCEEEEEECCCCEEEEEEECCCEEEECCCCCCCH LKELKGYVGIYPFKFPFEEEDIKWLKRLGTLNEKTKKLSPVVINDDIREIHAIEIEKFIK HHHHCCCEEECCCCCCCCHHHHHHHHHHCCCCHHHHHCCCEEECCCHHHHHHHHHHHHHC NKKVDVIIGGPPCEGYTGANPKREKNPYDRLYKDETGRLVLEYIRIVGDLQPKIFVMENV CCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECC PGIKEVRGAIIKEFREIGYEDVYFNTLRAEDYGNPSVRRRVFVSNIEINPEKTQPKTVIE CCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHEEEEEEEEECCCCCCHHHHHH AIGDLMYKGRDVPNHEFAALPARFRKRVHKLGWGDAFIYFKGANRRLGNYIRLHPLKLAE HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECHHHHHH TVMGKRFFIHPYEDRLLTPREQARLMSYPDYHLFAGGIRSCYNQIGESVPVALSRAIARV HHHCCEEEECCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IKENLK HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087