| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is wtpA
Identifier: 15669375
GI number: 15669375
Start: 1125191
End: 1126231
Strand: Direct
Name: wtpA
Synonym: MJ1186
Alternate gene names: 15669375
Gene position: 1125191-1126231 (Clockwise)
Preceding gene: 15669373
Following gene: 15669377
Centisome position: 67.58
GC content: 33.24
Gene sequence:
>1041_bases ATGATAAAAAGATTAATAGTCATCTCAATATTGCTAATAGTTGGAACAGTCCTATGTGGTTGTATGGAACAGGAAAATGT CGGACAGCAAAACTCTGAAGCCCAGGAAAAGATTGTTTTAAAGATATTCCACGCTGGAAGTTTATCTGTGCCTTTTGAAG AGTATGAAAAGATGTTTGAAAAAGAACATCCAAATGTTGATGTTGAAAGAGAACCAGCTGGAAGTGTTGCATGTGTAAGA AAGATAATTGACTTAGGAAAAAAGGCAGATATCTTAGCTTCAGCTGATTATTCTTTAATCCCTCAAATGATGATGCCTAA GTATGCAGATTGGTATGTTATGTTTGCAAGAAATGAGATTGTTTTGGCTTATACAGATAAAAGTAAATATAAAGACGAAA TAAACTCAACCAATTGGTATAAGATTTTACAGAGACCAGATGTTAAAATTGGATTCTCAAACCCTAACGATGACCCGTGT GGTTACAGAACCCAAATGGTCCTGCAGTTAGCAGAACTCTATTATAAAGACCCAACAATCTATGACAACTTAGTTTTAAA GCATTCAAACATAAAAGTTGAAGAAAATAACGGAACATACTTGATATTAGTCCCTAAAGAGTTAGATGTAGATACTAACA AATTGTTTGTTAGAAGTAAGGAGACAGATTTATTAGCTCCATTAGAAGCTGGAGCGTTTGATTACCTCTTTATCTACAAG AGTGTTGCAAACCAACACCACTTAAAATATATAGAACTTCCAAAGGAAATTAATTTAGGATATTACGAATATGCAGACAC TTACAAAAAAGTGGCTTTAAAAATAATTGCAAAGAATAAAACAATAAATGCAAAACCAATTGTTTATGGTATGACAGTTC CAACAAATGCACCACATAAAAAAGAAGCCATAGAGTTTGTTAAATTTGTGTTAGGGCATCCAGAAGTTTTAGAGAACAAT GGACAGCCAGCAATAATTCCAGCAGTTGCTTATGGAAATGTTCCAGAAGAGTTAAAGGATTTGGTTAAAATAGAGAAATA A
Upstream 100 bases:
>100_bases ATTTTATAGATTTTGTTAATCACTATTGATGAATATAATATTTAAATATGAAATCAATTATCTTTACTTTTTGAAAATCT ATTAAAAAAGGTGAATATAG
Downstream 100 bases:
>100_bases TTAAATAATACTCTCTAAAAATTCAATATCCTTTATTACCTCTTCTATTTTTTCCTCTTTTGTTACCGGATTTTTTTCTA ATCTTCTATCATCAAGCTCT
Product: molybdate ABC transporter periplasmic substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MIKRLIVISILLIVGTVLCGCMEQENVGQQNSEAQEKIVLKIFHAGSLSVPFEEYEKMFEKEHPNVDVEREPAGSVACVR KIIDLGKKADILASADYSLIPQMMMPKYADWYVMFARNEIVLAYTDKSKYKDEINSTNWYKILQRPDVKIGFSNPNDDPC GYRTQMVLQLAELYYKDPTIYDNLVLKHSNIKVEENNGTYLILVPKELDVDTNKLFVRSKETDLLAPLEAGAFDYLFIYK SVANQHHLKYIELPKEINLGYYEYADTYKKVALKIIAKNKTINAKPIVYGMTVPTNAPHKKEAIEFVKFVLGHPEVLENN GQPAIIPAVAYGNVPEELKDLVKIEK
Sequences:
>Translated_346_residues MIKRLIVISILLIVGTVLCGCMEQENVGQQNSEAQEKIVLKIFHAGSLSVPFEEYEKMFEKEHPNVDVEREPAGSVACVR KIIDLGKKADILASADYSLIPQMMMPKYADWYVMFARNEIVLAYTDKSKYKDEINSTNWYKILQRPDVKIGFSNPNDDPC GYRTQMVLQLAELYYKDPTIYDNLVLKHSNIKVEENNGTYLILVPKELDVDTNKLFVRSKETDLLAPLEAGAFDYLFIYK SVANQHHLKYIELPKEINLGYYEYADTYKKVALKIIAKNKTINAKPIVYGMTVPTNAPHKKEAIEFVKFVLGHPEVLENN GQPAIIPAVAYGNVPEELKDLVKIEK >Mature_346_residues MIKRLIVISILLIVGTVLCGCMEQENVGQQNSEAQEKIVLKIFHAGSLSVPFEEYEKMFEKEHPNVDVEREPAGSVACVR KIIDLGKKADILASADYSLIPQMMMPKYADWYVMFARNEIVLAYTDKSKYKDEINSTNWYKILQRPDVKIGFSNPNDDPC GYRTQMVLQLAELYYKDPTIYDNLVLKHSNIKVEENNGTYLILVPKELDVDTNKLFVRSKETDLLAPLEAGAFDYLFIYK SVANQHHLKYIELPKEINLGYYEYADTYKKVALKIIAKNKTINAKPIVYGMTVPTNAPHKKEAIEFVKFVLGHPEVLENN GQPAIIPAVAYGNVPEELKDLVKIEK
Specific function: Part of the ABC transporter complex wtpABC involved in molybdate/tungstate import. Binds tungstate and molybdate
COG id: COG0725
COG function: function code P; ABC-type molybdate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family. WtpA subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): WTPA_METJA (Q58586)
Other databases:
- EMBL: L77117 - PIR: A64448 - RefSeq: NP_248180.1 - PDB: 3CFZ - PDBsum: 3CFZ - ProteinModelPortal: Q58586 - SMR: Q58586 - GeneID: 1452084 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1186 - NMPDR: fig|243232.1.peg.1217 - TIGR: MJ1186 - HOGENOM: HBG457285 - OMA: IYKSVAN - ProtClustDB: PRK04168 - BioCyc: MJAN243232:MJ_1186-MONOMER - InterPro: IPR022498 - InterPro: IPR006059 - TIGRFAMs: TIGR03730
Pfam domain/function: PF01547 SBP_bac_1
EC number: NA
Molecular weight: Translated: 39445; Mature: 39445
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKRLIVISILLIVGTVLCGCMEQENVGQQNSEAQEKIVLKIFHAGSLSVPFEEYEKMFE CCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHEEEEEEEECCCCCCCHHHHHHHHH KEHPNVDVEREPAGSVACVRKIIDLGKKADILASADYSLIPQMMMPKYADWYVMFARNEI HCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHCCCCCCEEEEEECCEE VLAYTDKSKYKDEINSTNWYKILQRPDVKIGFSNPNDDPCGYRTQMVLQLAELYYKDPTI EEEEECCHHHHHHCCCCCEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCC YDNLVLKHSNIKVEENNGTYLILVPKELDVDTNKLFVRSKETDLLAPLEAGAFDYLFIYK CCCEEEEECCEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCEECCCCCCCHHHHHHHH SVANQHHLKYIELPKEINLGYYEYADTYKKVALKIIAKNKTINAKPIVYGMTVPTNAPHK HHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEECCCCCCCH KEAIEFVKFVLGHPEVLENNGQPAIIPAVAYGNVPEELKDLVKIEK HHHHHHHHHHHCCCHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCC >Mature Secondary Structure MIKRLIVISILLIVGTVLCGCMEQENVGQQNSEAQEKIVLKIFHAGSLSVPFEEYEKMFE CCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHEEEEEEEECCCCCCCHHHHHHHHH KEHPNVDVEREPAGSVACVRKIIDLGKKADILASADYSLIPQMMMPKYADWYVMFARNEI HCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHCCCCCCEEEEEECCEE VLAYTDKSKYKDEINSTNWYKILQRPDVKIGFSNPNDDPCGYRTQMVLQLAELYYKDPTI EEEEECCHHHHHHCCCCCEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCC YDNLVLKHSNIKVEENNGTYLILVPKELDVDTNKLFVRSKETDLLAPLEAGAFDYLFIYK CCCEEEEECCEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCEECCCCCCCHHHHHHHH SVANQHHLKYIELPKEINLGYYEYADTYKKVALKIIAKNKTINAKPIVYGMTVPTNAPHK HHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEECCCCCCCH KEAIEFVKFVLGHPEVLENNGQPAIIPAVAYGNVPEELKDLVKIEK HHHHHHHHHHHCCCHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087