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The map label for this gene is rfaE [C]

Identifier: 15669368

GI number: 15669368

Start: 1118836

End: 1119285

Strand: Direct

Name: rfaE [C]

Synonym: MJ1179

Alternate gene names: 15669368

Gene position: 1118836-1119285 (Clockwise)

Preceding gene: 15669367

Following gene: 15669369

Centisome position: 67.2

GC content: 31.33

Gene sequence:

>450_bases
ATGAAAAAGAGGGTAGTTACCGCTGGAACGTTTGATATTCTTCACCCTGGACATTATGAGATATTAAAATTTGCTAAAAG
TTTAGGAGATGAGCTAATAGTTATTGTTGCGAGGGATGAAACTGTAAAGAAATTAAAAGGTAGAAAACCTATAATTCCGG
AAGAACAAAGGAGGGAGATGGTTGAAGCATTAAAGCCTGTTGATAAAGCAATATTGGGAAGTTTGAAAAATAAATTAGAG
CCAATATTAGAGTTAAAACCAGATATTATTGTTCTTGGTCCTGACCAGACAACTTTTGATGAGGAAACACTAAAAAAAGA
ACTTGCTAAATATAATTTATATCCAGAGATTGTTAGATTTAGAGGTTATAAAAAATGTCCATTTCACAGCTCTTTTGATA
TTGTAAAAGAGATAATTAGGAGATTCTGCAATAAAGAGATTAAAATCTAA

Upstream 100 bases:

>100_bases
CTATAAGTGCCATATTAATTTAAAACTTTGATAATTGGTTATAAGTTGCCCTTTTCAAGGGCAATTAATGTCCTATTAAA
AAGAAATGGTGTGAATAGTT

Downstream 100 bases:

>100_bases
TGCTTTTTTATTAAAATTTTTATAATTTATTTTCTTATCCTATTATTATTTTCTTATAAGATAAATTATCTATAAAAAAA
TAAAAAATTTTATATATTGC

Product: glycerol-3-phosphate cytidyltransferase TaqD

Products: diphosphate; CDPglycerol

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MKKRVVTAGTFDILHPGHYEILKFAKSLGDELIVIVARDETVKKLKGRKPIIPEEQRREMVEALKPVDKAILGSLKNKLE
PILELKPDIIVLGPDQTTFDEETLKKELAKYNLYPEIVRFRGYKKCPFHSSFDIVKEIIRRFCNKEIKI

Sequences:

>Translated_149_residues
MKKRVVTAGTFDILHPGHYEILKFAKSLGDELIVIVARDETVKKLKGRKPIIPEEQRREMVEALKPVDKAILGSLKNKLE
PILELKPDIIVLGPDQTTFDEETLKKELAKYNLYPEIVRFRGYKKCPFHSSFDIVKEIIRRFCNKEIKI
>Mature_149_residues
MKKRVVTAGTFDILHPGHYEILKFAKSLGDELIVIVARDETVKKLKGRKPIIPEEQRREMVEALKPVDKAILGSLKNKLE
PILELKPDIIVLGPDQTTFDEETLKKELAKYNLYPEIVRFRGYKKCPFHSSFDIVKEIIRRFCNKEIKI

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0615

COG function: function code MI; Cytidylyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789432, Length=95, Percent_Identity=42.1052631578947, Blast_Score=67, Evalue=5e-13,
Organism=Drosophila melanogaster, GI45550974, Length=121, Percent_Identity=37.1900826446281, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI45550975, Length=121, Percent_Identity=37.1900826446281, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI45550973, Length=121, Percent_Identity=37.1900826446281, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1179_METJA (Q58579)

Other databases:

- EMBL:   L77117
- PIR:   B64447
- RefSeq:   NP_248173.1
- ProteinModelPortal:   Q58579
- SMR:   Q58579
- GeneID:   1452077
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1179
- NMPDR:   fig|243232.1.peg.1210
- TIGR:   MJ1179
- HOGENOM:   HBG545535
- OMA:   TVKKIKG
- ProtClustDB:   CLSK876487
- BioCyc:   MJAN243232:MJ_1179-MONOMER
- InterPro:   IPR004821
- InterPro:   IPR004820
- InterPro:   IPR014729
- Gene3D:   G3DSA:3.40.50.620
- TIGRFAMs:   TIGR00125

Pfam domain/function: PF01467 CTP_transf_2

EC number: 2.7.7.39

Molecular weight: Translated: 17289; Mature: 17289

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRVVTAGTFDILHPGHYEILKFAKSLGDELIVIVARDETVKKLKGRKPIIPEEQRREM
CCCCEEECCCHHCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCCCCCHHHHHHH
VEALKPVDKAILGSLKNKLEPILELKPDIIVLGPDQTTFDEETLKKELAKYNLYPEIVRF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHH
RGYKKCPFHSSFDIVKEIIRRFCNKEIKI
CCCCCCCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKRVVTAGTFDILHPGHYEILKFAKSLGDELIVIVARDETVKKLKGRKPIIPEEQRREM
CCCCEEECCCHHCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCCCCCHHHHHHH
VEALKPVDKAILGSLKNKLEPILELKPDIIVLGPDQTTFDEETLKKELAKYNLYPEIVRF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHH
RGYKKCPFHSSFDIVKEIIRRFCNKEIKI
CCCCCCCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: CTP; sn-glycerol 3-phosphate

Specific reaction: CTP + sn-glycerol 3-phosphate = diphosphate + CDP-glycerol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087