BacMap

Definition	Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession	NC_000909
Length	1,664,970

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The map label for this gene is hflB [C]

Identifier: 15669345

GI number: 15669345

Start: 1094408

End: 1097119

Strand: Reverse

Name: hflB [C]

Synonym: MJ1156

Alternate gene names: 15669345

Gene position: 1097119-1094408 (Counterclockwise)

Preceding gene: 15669346

Following gene: 15669344

Centisome position: 65.89

GC content: 36.54

Gene sequence:

>2712_bases
ATGGTTAAAGAATTAAAAGTTGCTGAAGCATATCAAGGAGATGTAGGGAGGGGTATTGCAAGAATAGACCCCTACACAAT
GGAAGAACTTGGTTTAAAACCAGGAGATGTTATTGAAATTGAAGGTCCAAAAGGAAAAGCTTATGCCATAGTTTATAGAG
GTTTCTTAGAAGATGCTGGAAAAGGAATTATAAGAATTGACGGTTATTTAAGGCAGAATGCTGGAGTAGCTATTGGAGAT
AGAGTAAAAGTTAAGAGAGTAGAGATTAAAGAAGCTAAAAAGGTTGTTTTAGCACCAACTCAACCAATTAGATTCGGCCC
AGGATTTGAGGACTTTGTTAAAAGGAAGATATTGGGACAAGTGTTAAGTAAAGGTTCAAAAGTTACTATTGGAGTTTTAG
GAACTGCTTTAACATTTGTTGTTGTTAGTACAACACCAGCTGGACCTGTTAGAGTAACTGACTTCACACACGTTGAGTTA
AAAGAAGAGCCAGTCAGTGAAATCAAAGAAACCAAAGTTCCAGATGTTACCTATGAAGATATTGGTGGTTTAAAAGAAGA
GGTTAAGAAAGTTAGAGAGATGATAGAACTTCCAATGAGACATCCAGAGTTATTTGAAAAATTAGGAATTGAGCCACCTA
AAGGAGTTTTATTAGTTGGACCACCAGGAACTGGTAAGACATTATTGGCTAAAGCAGTTGCTAACGAAGCTGGAGCAAAC
TTCTATGTAATTAACGGTCCAGAAATAATGAGTAAGTATGTTGGAGAAACAGAGGAGAATTTAAGAAAGATATTTGAAGA
AGCTGAAGAGAATGCTCCAAGTATAATATTCATTGATGAAATTGACGCTATAGCTCCAAAGAGAGACGAAGCTACAGGAG
AAGTAGAGAGAAGATTAGTTGCTCAGCTCTTAACCTTAATGGATGGATTGAAGGGAAGAGGGCAAGTTGTAGTTATTGGA
GCTACTAACAGACCAAACGCATTAGACCCAGCTTTAAGAAGACCAGGAAGATTCGATAGAGAGATTGTTATTGGCGTCCC
AGACAGAGAAGGTAGAAAAGAAATCTTACAGATACACACAAGAAACATGCCATTAGCCGAAGATGTTGATTTAGACTACT
TGGCAGATGTAACACACGGATTTGTTGGAGCTGATTTAGCAGCTTTATGTAAAGAGGCAGCAATGAGAGCTTTAAGAAGA
GTATTGCCAAGTATTGACTTAGAGGCAGAAGAAATTCCAAAAGAAGTTTTAGATAACTTAAAAGTCACAATGGATGACTT
CAAAGAGGCATTGAAAGATGTTGAGCCATCAGCAATGAGAGAAGTTTTAGTTGAAGTTCCAAATGTTAAGTGGGAAGATA
TTGGAGGATTAGAAGAGGTTAAGCAAGAATTGAGAGAAGCTGTTGAATGGCCATTAAAAGCTAAAGAAGTATTTGAGAAG
ATAGGTGTAAGACCACCAAAAGGAGTGTTGTTATTTGGACCACCAGGAACTGGTAAGACATTATTAGCTAAAGCTGTAGC
TAACGAAAGTGGAGCAAACTTCATAAGCGTTAAAGGGCCAGAAATCTTCAGCAAGTGGGTTGGGGAATCAGAGAAGGCAA
TAAGAGAGATATTCAGAAAGGCAAGACAGTCAGCACCATGTATAATATTCTTCGATGAAATCGATGCTATAGCACCAAAA
AGAGGTAGAGACTTGAGCTCAGCAGTTACTGATAAAGTTGTAAATCAGCTATTAACTGAATTGGATGGAATGGAAGAGCC
AAAGGATGTTGTTGTTATTGCAGCAACAAACAGACCAGATATCATTGACCCAGCTTTATTGAGACCGGGAAGATTAGATA
GAGTCATATTAGTTCCAGTTCCAGATGAAAAGGCAAGATTGGATATATTCAAGATACACACAAGAAGTATGAACTTAGCT
GAAGATGTTAATTTAGAAGAATTAGCTAAGAAGACTGAAGGATATACAGGAGCTGACATTGAGGCATTGTGTAGAGAGGC
AGCAATGTTGGCAGTTAGAGAGAGTATAGGAAAACCATGGGATATTGAAGTAAAACTTAGAGAGTTAATTAACTACTTGC
AGAGCATTTCAGGAACATTCAGAGCTGCTGCAGTAGAGTTAAACAGCGTTATTAAAGCTACAAAAGAGAGAGAATCTGCT
GAAGCAGGAGAGTTTAGTGAGTTAAAGAATGCTATTGGAAAGATAATTAGCGTTTTATCTCCAGCTAAGGAGAAAATTGA
AGCAGTAGAGAAAGAAATCGACAAATTCCTTGAAGTTATAAACAAAGAGGAATTAAAACCATCAGAGAAAGATGAAGCAC
AGAAGTTGGCAAAATACTTAAAGGATATATTAGGCAAGTTAAAAGAAATGATAGACAACATCTACGAATTAGAGAACAAG
TTAAATACCTTAAAAGAACAAGTTTCAGCTGAAGAGATTGATGAGATAATTAAAACAACACAAAACATTATCCAAAGATT
CACAACATCATTGGATGAACTCAAGAATATATTGAAGGACATTGAAAGTATAAGATTGAAAGTTTCAACAAAAGATGTTA
AGATTAAGAAAGAACACTTCATGAAAGCCCTTGAGAAAATTAAACCATCTGTAAGTAAGGAGGATATGAGAGTCTATGAG
AAATTAGCTCAAGAGTATGGAAGAGCTACGTCAGTTGAAAAGAAAAAGGAAGAAGGTAAAGAAGTGATTTAA

Upstream 100 bases:

>100_bases
AAATATGAACAAAACCGAAAGGTTTATATAGAACTTCAACGGTATATTATCTCCAGTGAGAAAATTATTATAAAAAGATA
AAATAAACGGAGGGATTTTT

Downstream 100 bases:

>100_bases
ATTCCCTAAAAATTTTTCTTTTTTATTTTTTATCTACTGTTATCGCTATATTTAAATGTATTTTATGTTCGTTTTACAAA
ACATCCTATCTATTAGGTTT

Product: cell division protein CDC48

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 903; Mature: 903

Protein sequence:

>903_residues
MVKELKVAEAYQGDVGRGIARIDPYTMEELGLKPGDVIEIEGPKGKAYAIVYRGFLEDAGKGIIRIDGYLRQNAGVAIGD
RVKVKRVEIKEAKKVVLAPTQPIRFGPGFEDFVKRKILGQVLSKGSKVTIGVLGTALTFVVVSTTPAGPVRVTDFTHVEL
KEEPVSEIKETKVPDVTYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEAGAN
FYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATGEVERRLVAQLLTLMDGLKGRGQVVVIG
ATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRR
VLPSIDLEAEEIPKEVLDNLKVTMDDFKEALKDVEPSAMREVLVEVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFEK
IGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPK
RGRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLA
EDVNLEELAKKTEGYTGADIEALCREAAMLAVRESIGKPWDIEVKLRELINYLQSISGTFRAAAVELNSVIKATKERESA
EAGEFSELKNAIGKIISVLSPAKEKIEAVEKEIDKFLEVINKEELKPSEKDEAQKLAKYLKDILGKLKEMIDNIYELENK
LNTLKEQVSAEEIDEIIKTTQNIIQRFTTSLDELKNILKDIESIRLKVSTKDVKIKKEHFMKALEKIKPSVSKEDMRVYE
KLAQEYGRATSVEKKKEEGKEVI

Sequences:

>Translated_903_residues
MVKELKVAEAYQGDVGRGIARIDPYTMEELGLKPGDVIEIEGPKGKAYAIVYRGFLEDAGKGIIRIDGYLRQNAGVAIGD
RVKVKRVEIKEAKKVVLAPTQPIRFGPGFEDFVKRKILGQVLSKGSKVTIGVLGTALTFVVVSTTPAGPVRVTDFTHVEL
KEEPVSEIKETKVPDVTYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEAGAN
FYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATGEVERRLVAQLLTLMDGLKGRGQVVVIG
ATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRR
VLPSIDLEAEEIPKEVLDNLKVTMDDFKEALKDVEPSAMREVLVEVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFEK
IGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPK
RGRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLA
EDVNLEELAKKTEGYTGADIEALCREAAMLAVRESIGKPWDIEVKLRELINYLQSISGTFRAAAVELNSVIKATKERESA
EAGEFSELKNAIGKIISVLSPAKEKIEAVEKEIDKFLEVINKEELKPSEKDEAQKLAKYLKDILGKLKEMIDNIYELENK
LNTLKEQVSAEEIDEIIKTTQNIIQRFTTSLDELKNILKDIESIRLKVSTKDVKIKKEHFMKALEKIKPSVSKEDMRVYE
KLAQEYGRATSVEKKKEEGKEVI
>Mature_903_residues
MVKELKVAEAYQGDVGRGIARIDPYTMEELGLKPGDVIEIEGPKGKAYAIVYRGFLEDAGKGIIRIDGYLRQNAGVAIGD
RVKVKRVEIKEAKKVVLAPTQPIRFGPGFEDFVKRKILGQVLSKGSKVTIGVLGTALTFVVVSTTPAGPVRVTDFTHVEL
KEEPVSEIKETKVPDVTYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEAGAN
FYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATGEVERRLVAQLLTLMDGLKGRGQVVVIG
ATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRR
VLPSIDLEAEEIPKEVLDNLKVTMDDFKEALKDVEPSAMREVLVEVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFEK
IGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPK
RGRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLA
EDVNLEELAKKTEGYTGADIEALCREAAMLAVRESIGKPWDIEVKLRELINYLQSISGTFRAAAVELNSVIKATKERESA
EAGEFSELKNAIGKIISVLSPAKEKIEAVEKEIDKFLEVINKEELKPSEKDEAQKLAKYLKDILGKLKEMIDNIYELENK
LNTLKEQVSAEEIDEIIKTTQNIIQRFTTSLDELKNILKDIESIRLKVSTKDVKIKKEHFMKALEKIKPSVSKEDMRVYE
KLAQEYGRATSVEKKKEEGKEVI

Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family. CDC48 subfamily

Homologues:

Organism=Homo sapiens, GI6005942, Length=655, Percent_Identity=53.4351145038168, Blast_Score=684, Evalue=0.0,
Organism=Homo sapiens, GI157671927, Length=581, Percent_Identity=53.7005163511188, Blast_Score=605, Evalue=1e-173,
Organism=Homo sapiens, GI45643123, Length=558, Percent_Identity=49.1039426523297, Blast_Score=525, Evalue=1e-149,
Organism=Homo sapiens, GI45643125, Length=558, Percent_Identity=49.1039426523297, Blast_Score=524, Evalue=1e-148,
Organism=Homo sapiens, GI229577436, Length=711, Percent_Identity=41.9127988748242, Blast_Score=482, Evalue=1e-136,
Organism=Homo sapiens, GI4505725, Length=479, Percent_Identity=39.6659707724426, Blast_Score=317, Evalue=3e-86,
Organism=Homo sapiens, GI194018488, Length=471, Percent_Identity=37.791932059448, Blast_Score=278, Evalue=1e-74,
Organism=Homo sapiens, GI153792536, Length=274, Percent_Identity=45.985401459854, Blast_Score=263, Evalue=5e-70,
Organism=Homo sapiens, GI24497618, Length=273, Percent_Identity=45.7875457875458, Blast_Score=263, Evalue=7e-70,
Organism=Homo sapiens, GI5729991, Length=284, Percent_Identity=45.7746478873239, Blast_Score=243, Evalue=5e-64,
Organism=Homo sapiens, GI24430151, Length=273, Percent_Identity=47.6190476190476, Blast_Score=243, Evalue=6e-64,
Organism=Homo sapiens, GI24430155, Length=284, Percent_Identity=45.7746478873239, Blast_Score=242, Evalue=9e-64,
Organism=Homo sapiens, GI89064750, Length=284, Percent_Identity=45.7746478873239, Blast_Score=242, Evalue=1e-63,
Organism=Homo sapiens, GI24497435, Length=243, Percent_Identity=48.1481481481481, Blast_Score=238, Evalue=3e-62,
Organism=Homo sapiens, GI195539395, Length=228, Percent_Identity=49.1228070175439, Blast_Score=236, Evalue=9e-62,
Organism=Homo sapiens, GI4506209, Length=276, Percent_Identity=43.8405797101449, Blast_Score=234, Evalue=2e-61,
Organism=Homo sapiens, GI21361144, Length=233, Percent_Identity=49.7854077253219, Blast_Score=233, Evalue=7e-61,
Organism=Homo sapiens, GI300192933, Length=240, Percent_Identity=46.25, Blast_Score=215, Evalue=1e-55,
Organism=Homo sapiens, GI156564401, Length=415, Percent_Identity=36.3855421686747, Blast_Score=206, Evalue=8e-53,
Organism=Homo sapiens, GI4507173, Length=232, Percent_Identity=44.3965517241379, Blast_Score=204, Evalue=4e-52,
Organism=Homo sapiens, GI14149767, Length=252, Percent_Identity=44.8412698412698, Blast_Score=203, Evalue=6e-52,
Organism=Homo sapiens, GI62177112, Length=252, Percent_Identity=44.8412698412698, Blast_Score=203, Evalue=6e-52,
Organism=Homo sapiens, GI5901990, Length=252, Percent_Identity=44.4444444444444, Blast_Score=201, Evalue=3e-51,
Organism=Homo sapiens, GI21327685, Length=297, Percent_Identity=40.0673400673401, Blast_Score=197, Evalue=4e-50,
Organism=Homo sapiens, GI7657689, Length=297, Percent_Identity=40.0673400673401, Blast_Score=197, Evalue=4e-50,
Organism=Homo sapiens, GI7019569, Length=248, Percent_Identity=42.741935483871, Blast_Score=195, Evalue=2e-49,
Organism=Homo sapiens, GI310125280, Length=265, Percent_Identity=43.3962264150943, Blast_Score=187, Evalue=3e-47,
Organism=Homo sapiens, GI31742536, Length=253, Percent_Identity=39.1304347826087, Blast_Score=186, Evalue=6e-47,
Organism=Homo sapiens, GI112789543, Length=253, Percent_Identity=39.1304347826087, Blast_Score=186, Evalue=6e-47,
Organism=Homo sapiens, GI17865802, Length=237, Percent_Identity=41.7721518987342, Blast_Score=186, Evalue=8e-47,
Organism=Homo sapiens, GI310125282, Length=275, Percent_Identity=42.5454545454545, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI226371754, Length=245, Percent_Identity=41.2244897959184, Blast_Score=184, Evalue=3e-46,
Organism=Homo sapiens, GI31377644, Length=274, Percent_Identity=36.8613138686131, Blast_Score=173, Evalue=6e-43,
Organism=Homo sapiens, GI11875211, Length=285, Percent_Identity=37.8947368421053, Blast_Score=170, Evalue=7e-42,
Organism=Homo sapiens, GI40806170, Length=285, Percent_Identity=37.8947368421053, Blast_Score=170, Evalue=7e-42,
Organism=Homo sapiens, GI64084766, Length=234, Percent_Identity=35.4700854700855, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI40806173, Length=139, Percent_Identity=44.6043165467626, Blast_Score=121, Evalue=3e-27,
Organism=Homo sapiens, GI116292174, Length=303, Percent_Identity=28.7128712871287, Blast_Score=112, Evalue=2e-24,
Organism=Homo sapiens, GI40255052, Length=235, Percent_Identity=27.6595744680851, Blast_Score=80, Evalue=9e-15,
Organism=Homo sapiens, GI75677353, Length=347, Percent_Identity=24.7838616714697, Blast_Score=72, Evalue=3e-12,
Organism=Homo sapiens, GI11321607, Length=168, Percent_Identity=29.7619047619048, Blast_Score=71, Evalue=4e-12,
Organism=Escherichia coli, GI1789568, Length=239, Percent_Identity=48.1171548117155, Blast_Score=222, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI17532375, Length=659, Percent_Identity=50.9863429438543, Blast_Score=671, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17531535, Length=668, Percent_Identity=50.2994011976048, Blast_Score=664, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17537217, Length=576, Percent_Identity=42.0138888888889, Blast_Score=433, Evalue=1e-121,
Organism=Caenorhabditis elegans, GI17508053, Length=539, Percent_Identity=39.1465677179963, Blast_Score=336, Evalue=4e-92,
Organism=Caenorhabditis elegans, GI133931034, Length=278, Percent_Identity=46.4028776978417, Blast_Score=256, Evalue=5e-68,
Organism=Caenorhabditis elegans, GI193206116, Length=278, Percent_Identity=46.4028776978417, Blast_Score=256, Evalue=5e-68,
Organism=Caenorhabditis elegans, GI193206114, Length=278, Percent_Identity=46.4028776978417, Blast_Score=256, Evalue=6e-68,
Organism=Caenorhabditis elegans, GI17554786, Length=243, Percent_Identity=48.1481481481481, Blast_Score=244, Evalue=2e-64,
Organism=Caenorhabditis elegans, GI17563250, Length=244, Percent_Identity=47.9508196721311, Blast_Score=238, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI71987372, Length=254, Percent_Identity=44.8818897637795, Blast_Score=235, Evalue=6e-62,
Organism=Caenorhabditis elegans, GI71987364, Length=254, Percent_Identity=44.8818897637795, Blast_Score=235, Evalue=7e-62,
Organism=Caenorhabditis elegans, GI25153574, Length=477, Percent_Identity=33.3333333333333, Blast_Score=234, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI25144278, Length=243, Percent_Identity=46.5020576131687, Blast_Score=234, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI25144281, Length=243, Percent_Identity=46.5020576131687, Blast_Score=233, Evalue=3e-61,
Organism=Caenorhabditis elegans, GI17562804, Length=473, Percent_Identity=33.1923890063425, Blast_Score=229, Evalue=6e-60,
Organism=Caenorhabditis elegans, GI17508701, Length=233, Percent_Identity=47.6394849785408, Blast_Score=226, Evalue=4e-59,
Organism=Caenorhabditis elegans, GI17563248, Length=230, Percent_Identity=48.2608695652174, Blast_Score=224, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI17554784, Length=263, Percent_Identity=45.2471482889734, Blast_Score=224, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI17505546, Length=243, Percent_Identity=47.3251028806584, Blast_Score=224, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI193209502, Length=224, Percent_Identity=49.5535714285714, Blast_Score=224, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI71994521, Length=233, Percent_Identity=45.9227467811159, Blast_Score=197, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17554264, Length=219, Percent_Identity=43.8356164383562, Blast_Score=189, Evalue=5e-48,
Organism=Caenorhabditis elegans, GI25146157, Length=280, Percent_Identity=38.5714285714286, Blast_Score=184, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI115534323, Length=233, Percent_Identity=45.4935622317597, Blast_Score=182, Evalue=5e-46,
Organism=Caenorhabditis elegans, GI133901662, Length=417, Percent_Identity=34.5323741007194, Blast_Score=182, Evalue=8e-46,
Organism=Caenorhabditis elegans, GI133901658, Length=419, Percent_Identity=34.3675417661098, Blast_Score=181, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI86561515, Length=236, Percent_Identity=41.9491525423729, Blast_Score=180, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI17508421, Length=291, Percent_Identity=37.1134020618557, Blast_Score=164, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI32563584, Length=294, Percent_Identity=36.734693877551, Blast_Score=164, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI17541224, Length=230, Percent_Identity=37.8260869565217, Blast_Score=161, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17541226, Length=230, Percent_Identity=37.8260869565217, Blast_Score=161, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17560432, Length=269, Percent_Identity=39.4052044609665, Blast_Score=159, Evalue=5e-39,
Organism=Caenorhabditis elegans, GI71990294, Length=197, Percent_Identity=30.9644670050761, Blast_Score=80, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17570397, Length=103, Percent_Identity=43.6893203883495, Blast_Score=79, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI32566590, Length=103, Percent_Identity=43.6893203883495, Blast_Score=79, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17533043, Length=222, Percent_Identity=28.3783783783784, Blast_Score=67, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6320077, Length=666, Percent_Identity=52.7027027027027, Blast_Score=674, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6323429, Length=560, Percent_Identity=51.4285714285714, Blast_Score=560, Evalue=1e-160,
Organism=Saccharomyces cerevisiae, GI6322994, Length=577, Percent_Identity=44.0207972270364, Blast_Score=476, Evalue=1e-134,
Organism=Saccharomyces cerevisiae, GI6322651, Length=494, Percent_Identity=35.0202429149798, Blast_Score=273, Evalue=9e-74,
Organism=Saccharomyces cerevisiae, GI6321709, Length=277, Percent_Identity=46.9314079422383, Blast_Score=259, Evalue=1e-69,
Organism=Saccharomyces cerevisiae, GI6324000, Length=448, Percent_Identity=35.7142857142857, Blast_Score=259, Evalue=2e-69,
Organism=Saccharomyces cerevisiae, GI6320197, Length=269, Percent_Identity=47.9553903345725, Blast_Score=241, Evalue=5e-64,
Organism=Saccharomyces cerevisiae, GI6321390, Length=232, Percent_Identity=47.4137931034483, Blast_Score=234, Evalue=3e-62,
Organism=Saccharomyces cerevisiae, GI6324833, Length=245, Percent_Identity=46.530612244898, Blast_Score=234, Evalue=4e-62,
Organism=Saccharomyces cerevisiae, GI6322704, Length=229, Percent_Identity=48.0349344978166, Blast_Score=224, Evalue=7e-59,
Organism=Saccharomyces cerevisiae, GI6320602, Length=298, Percent_Identity=42.2818791946309, Blast_Score=223, Evalue=9e-59,
Organism=Saccharomyces cerevisiae, GI6324691, Length=231, Percent_Identity=44.1558441558442, Blast_Score=211, Evalue=3e-55,
Organism=Saccharomyces cerevisiae, GI6319554, Length=416, Percent_Identity=36.0576923076923, Blast_Score=205, Evalue=2e-53,
Organism=Saccharomyces cerevisiae, GI6325281, Length=241, Percent_Identity=41.9087136929461, Blast_Score=197, Evalue=6e-51,
Organism=Saccharomyces cerevisiae, GI6320854, Length=237, Percent_Identity=44.3037974683544, Blast_Score=196, Evalue=1e-50,
Organism=Saccharomyces cerevisiae, GI6323736, Length=230, Percent_Identity=45.2173913043478, Blast_Score=196, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6325431, Length=236, Percent_Identity=42.7966101694915, Blast_Score=184, Evalue=8e-47,
Organism=Saccharomyces cerevisiae, GI6321465, Length=225, Percent_Identity=42.2222222222222, Blast_Score=181, Evalue=6e-46,
Organism=Saccharomyces cerevisiae, GI6325183, Length=282, Percent_Identity=36.5248226950355, Blast_Score=174, Evalue=6e-44,
Organism=Saccharomyces cerevisiae, GI6320887, Length=293, Percent_Identity=36.1774744027304, Blast_Score=171, Evalue=5e-43,
Organism=Saccharomyces cerevisiae, GI9755327, Length=281, Percent_Identity=29.5373665480427, Blast_Score=80, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6320583, Length=149, Percent_Identity=30.8724832214765, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI161076486, Length=684, Percent_Identity=49.8538011695906, Blast_Score=659, Evalue=0.0,
Organism=Drosophila melanogaster, GI17137560, Length=684, Percent_Identity=49.8538011695906, Blast_Score=659, Evalue=0.0,
Organism=Drosophila melanogaster, GI161076488, Length=662, Percent_Identity=50.7552870090634, Blast_Score=658, Evalue=0.0,
Organism=Drosophila melanogaster, GI19921202, Length=600, Percent_Identity=38.1666666666667, Blast_Score=419, Evalue=1e-117,
Organism=Drosophila melanogaster, GI281365776, Length=272, Percent_Identity=53.3088235294118, Blast_Score=300, Evalue=4e-81,
Organism=Drosophila melanogaster, GI24660075, Length=272, Percent_Identity=53.3088235294118, Blast_Score=300, Evalue=4e-81,
Organism=Drosophila melanogaster, GI45552965, Length=272, Percent_Identity=53.3088235294118, Blast_Score=299, Evalue=5e-81,
Organism=Drosophila melanogaster, GI21355121, Length=672, Percent_Identity=30.6547619047619, Blast_Score=294, Evalue=2e-79,
Organism=Drosophila melanogaster, GI24656825, Length=495, Percent_Identity=34.5454545454545, Blast_Score=283, Evalue=4e-76,
Organism=Drosophila melanogaster, GI24656820, Length=514, Percent_Identity=33.2684824902724, Blast_Score=276, Evalue=4e-74,
Organism=Drosophila melanogaster, GI281363136, Length=539, Percent_Identity=33.3951762523191, Blast_Score=253, Evalue=3e-67,
Organism=Drosophila melanogaster, GI78707192, Length=539, Percent_Identity=33.3951762523191, Blast_Score=253, Evalue=3e-67,
Organism=Drosophila melanogaster, GI18860063, Length=284, Percent_Identity=45.7746478873239, Blast_Score=246, Evalue=5e-65,
Organism=Drosophila melanogaster, GI24649446, Length=244, Percent_Identity=49.5901639344262, Blast_Score=243, Evalue=3e-64,
Organism=Drosophila melanogaster, GI24652279, Length=196, Percent_Identity=56.1224489795918, Blast_Score=243, Evalue=5e-64,
Organism=Drosophila melanogaster, GI281361487, Length=233, Percent_Identity=49.7854077253219, Blast_Score=242, Evalue=7e-64,
Organism=Drosophila melanogaster, GI19920408, Length=277, Percent_Identity=44.4043321299639, Blast_Score=239, Evalue=9e-63,
Organism=Drosophila melanogaster, GI24651451, Length=245, Percent_Identity=47.7551020408163, Blast_Score=237, Evalue=2e-62,
Organism=Drosophila melanogaster, GI17137738, Length=229, Percent_Identity=50.2183406113537, Blast_Score=235, Evalue=1e-61,
Organism=Drosophila melanogaster, GI17738151, Length=235, Percent_Identity=49.3617021276596, Blast_Score=234, Evalue=2e-61,
Organism=Drosophila melanogaster, GI24663015, Length=244, Percent_Identity=45.0819672131148, Blast_Score=227, Evalue=2e-59,
Organism=Drosophila melanogaster, GI24640100, Length=228, Percent_Identity=47.8070175438597, Blast_Score=227, Evalue=3e-59,
Organism=Drosophila melanogaster, GI24665814, Length=233, Percent_Identity=47.6394849785408, Blast_Score=210, Evalue=5e-54,
Organism=Drosophila melanogaster, GI28574878, Length=233, Percent_Identity=47.6394849785408, Blast_Score=209, Evalue=5e-54,
Organism=Drosophila melanogaster, GI24658770, Length=224, Percent_Identity=45.0892857142857, Blast_Score=207, Evalue=2e-53,
Organism=Drosophila melanogaster, GI17864540, Length=408, Percent_Identity=35.2941176470588, Blast_Score=198, Evalue=2e-50,
Organism=Drosophila melanogaster, GI28573010, Length=408, Percent_Identity=35.7843137254902, Blast_Score=196, Evalue=5e-50,
Organism=Drosophila melanogaster, GI24639391, Length=234, Percent_Identity=43.5897435897436, Blast_Score=196, Evalue=7e-50,
Organism=Drosophila melanogaster, GI24644145, Length=279, Percent_Identity=41.5770609318996, Blast_Score=194, Evalue=3e-49,
Organism=Drosophila melanogaster, GI24581396, Length=292, Percent_Identity=39.041095890411, Blast_Score=192, Evalue=1e-48,
Organism=Drosophila melanogaster, GI281360142, Length=242, Percent_Identity=41.7355371900826, Blast_Score=189, Evalue=8e-48,
Organism=Drosophila melanogaster, GI21357333, Length=242, Percent_Identity=41.7355371900826, Blast_Score=189, Evalue=8e-48,
Organism=Drosophila melanogaster, GI281360146, Length=242, Percent_Identity=41.7355371900826, Blast_Score=189, Evalue=9e-48,
Organism=Drosophila melanogaster, GI281360138, Length=242, Percent_Identity=41.7355371900826, Blast_Score=189, Evalue=9e-48,
Organism=Drosophila melanogaster, GI281360144, Length=242, Percent_Identity=41.7355371900826, Blast_Score=188, Evalue=1e-47,
Organism=Drosophila melanogaster, GI281360140, Length=242, Percent_Identity=41.7355371900826, Blast_Score=188, Evalue=1e-47,
Organism=Drosophila melanogaster, GI281360136, Length=242, Percent_Identity=41.7355371900826, Blast_Score=188, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24644411, Length=242, Percent_Identity=41.7355371900826, Blast_Score=188, Evalue=1e-47,
Organism=Drosophila melanogaster, GI18859657, Length=237, Percent_Identity=43.0379746835443, Blast_Score=188, Evalue=2e-47,
Organism=Drosophila melanogaster, GI20129423, Length=270, Percent_Identity=37.037037037037, Blast_Score=182, Evalue=8e-46,
Organism=Drosophila melanogaster, GI20129529, Length=254, Percent_Identity=39.3700787401575, Blast_Score=176, Evalue=7e-44,
Organism=Drosophila melanogaster, GI28571849, Length=287, Percent_Identity=37.9790940766551, Blast_Score=162, Evalue=8e-40,
Organism=Drosophila melanogaster, GI28571847, Length=287, Percent_Identity=37.9790940766551, Blast_Score=162, Evalue=8e-40,
Organism=Drosophila melanogaster, GI24639486, Length=236, Percent_Identity=37.7118644067797, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI45554047, Length=167, Percent_Identity=42.5149700598802, Blast_Score=140, Evalue=3e-33,
Organism=Drosophila melanogaster, GI28573181, Length=160, Percent_Identity=31.875, Blast_Score=76, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1156_METJA (Q58556)

Other databases:

- EMBL:   L77117
- PIR:   C64444
- RefSeq:   NP_248150.1
- ProteinModelPortal:   Q58556
- GeneID:   1452054
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1156
- NMPDR:   fig|243232.1.peg.1187
- TIGR:   MJ1156
- HOGENOM:   HBG597299
- OMA:   YLADVTH
- ProtClustDB:   CLSK2517695
- BioCyc:   MJAN243232:MJ_1156-MONOMER
- GO:   GO:0006508
- InterPro:   IPR009010
- InterPro:   IPR003593
- InterPro:   IPR005938
- InterPro:   IPR003959
- InterPro:   IPR003960
- InterPro:   IPR003338
- InterPro:   IPR004201
- InterPro:   IPR001984
- InterPro:   IPR015415
- Gene3D:   G3DSA:2.40.40.20
- PRINTS:   PR00830
- SMART:   SM00382
- TIGRFAMs:   TIGR01243

Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N; PF09336 Vps4_C; SSF50692 Asp_decarb_fold

EC number: 3.4.24.- [C]

Molecular weight: Translated: 100404; Mature: 100404

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS00674 AAA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKELKVAEAYQGDVGRGIARIDPYTMEELGLKPGDVIEIEGPKGKAYAIVYRGFLEDAG
CCCCHHHHHHHCCCHHCCHHHCCCCCHHHHCCCCCCEEEEECCCCCEEEEEEHHHHHHHC
KGIIRIDGYLRQNAGVAIGDRVKVKRVEIKEAKKVVLAPTQPIRFGPGFEDFVKRKILGQ
CCEEEECCCCCCCCCEEECCCEEEEEEEHHHHCEEEECCCCCCCCCCCHHHHHHHHHHHH
VLSKGSKVTIGVLGTALTFVVVSTTPAGPVRVTDFTHVELKEEPVSEIKETKVPDVTYED
HHCCCCEEEEHHHHHHHHHHEEECCCCCCEEECCCEEEEECCCHHHHHHHCCCCCCCHHH
IGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEAGAN
HCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCC
FYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATGEVERRLV
EEEECCHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
AQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHT
HHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCCEEEEECCCCCHHHHHHHHHH
RNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSIDLEAEEIPKEVLDNL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
KVTMDDFKEALKDVEPSAMREVLVEVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFEK
CCCHHHHHHHHHCCCHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHCCCHHHHHHHH
IGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRK
HCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCHHHHHHHHHHH
ARQSAPCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIAATNRPD
HHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC
IIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGADI
CCCHHHCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCHHCCCHHHHHHHHCCCCCCCH
EALCREAAMLAVRESIGKPWDIEVKLRELINYLQSISGTFRAAAVELNSVIKATKERESA
HHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
EAGEFSELKNAIGKIISVLSPAKEKIEAVEKEIDKFLEVINKEELKPSEKDEAQKLAKYL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
KDILGKLKEMIDNIYELENKLNTLKEQVSAEEIDEIIKTTQNIIQRFTTSLDELKNILKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IESIRLKVSTKDVKIKKEHFMKALEKIKPSVSKEDMRVYEKLAQEYGRATSVEKKKEEGK
HHHHEEEEECCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCC
EVI
CCC
>Mature Secondary Structure
MVKELKVAEAYQGDVGRGIARIDPYTMEELGLKPGDVIEIEGPKGKAYAIVYRGFLEDAG
CCCCHHHHHHHCCCHHCCHHHCCCCCHHHHCCCCCCEEEEECCCCCEEEEEEHHHHHHHC
KGIIRIDGYLRQNAGVAIGDRVKVKRVEIKEAKKVVLAPTQPIRFGPGFEDFVKRKILGQ
CCEEEECCCCCCCCCEEECCCEEEEEEEHHHHCEEEECCCCCCCCCCCHHHHHHHHHHHH
VLSKGSKVTIGVLGTALTFVVVSTTPAGPVRVTDFTHVELKEEPVSEIKETKVPDVTYED
HHCCCCEEEEHHHHHHHHHHEEECCCCCCEEECCCEEEEECCCHHHHHHHCCCCCCCHHH
IGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEAGAN
HCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCC
FYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATGEVERRLV
EEEECCHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
AQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHT
HHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCCEEEEECCCCCHHHHHHHHHH
RNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSIDLEAEEIPKEVLDNL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
KVTMDDFKEALKDVEPSAMREVLVEVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFEK
CCCHHHHHHHHHCCCHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHCCCHHHHHHHH
IGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRK
HCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCHHHHHHHHHHH
ARQSAPCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIAATNRPD
HHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC
IIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGADI
CCCHHHCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCHHCCCHHHHHHHHCCCCCCCH
EALCREAAMLAVRESIGKPWDIEVKLRELINYLQSISGTFRAAAVELNSVIKATKERESA
HHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
EAGEFSELKNAIGKIISVLSPAKEKIEAVEKEIDKFLEVINKEELKPSEKDEAQKLAKYL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
KDILGKLKEMIDNIYELENKLNTLKEQVSAEEIDEIIKTTQNIIQRFTTSLDELKNILKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IESIRLKVSTKDVKIKKEHFMKALEKIKPSVSKEDMRVYEKLAQEYGRATSVEKKKEEGK
HHHHEEEEECCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCC
EVI
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087