| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669341
Identifier: 15669341
GI number: 15669341
Start: 1090240
End: 1091595
Strand: Reverse
Name: 15669341
Synonym: MJ1154
Alternate gene names: NA
Gene position: 1091595-1090240 (Counterclockwise)
Preceding gene: 15669342
Following gene: 15669336
Centisome position: 65.56
GC content: 31.12
Gene sequence:
>1356_bases ATGAAGGTTATTAGAGACTCTATCCACAAAGATATATATTTAGATGAAAAAGAGCTGGAGATTATTGATAGCGAAGAATT TCAGAGATTGAGAAATATAAAACAGACTGGTTTAACATACTTAGTTTATCCATCAGCAAATCATACAAGGTTTGAACATT CCTTAGGAACTATGTTTATTGCCTCAAAAATAGCAGAGAAGATTAATGCAGATGTTGAGCTTACAAGAGTCTCCGCTTTA TTGCATGATATTGGACATCCTCCATTCTCTCACACATTGGAAATTTGTGGCTACAGTCATGAAGTTTTTGGCAGAAAGAA AATCAAACATATGAATTTAGATAACTTTTCAAAGAGCGAAATAATTAAAACCTTAAATAGGAAAAATTTAGAGGGTAAGA TAATTTCTGGAGATGTTGATGCTGATAGAATGGATTATTTATTGAGGGATAGCTACCACACAGGAACAGCTTATGGGATG ATTGATTTACCAAGAATTCTGAGGAGTATAACAACCTTTGAGAGTTTTGGAAAAGTTAAGATAGGGATATTAAAGAAGGG AATTCAAGCAATTGAATCGCTATTAGTTGCGAGGCATCAGATGTATTCAGCTGTTTATATGCATCCAACAGTTAGAATAG CGGACACTATGATAAAGAGGGCAGTAATAAAAGAAATACAAGAAAAAAATTTGGATATAAAAGATTTAGCTAACATGGAT GATATTGCACTTGTTTCATTTTTGAGGATTTCTGAAAACTATTTGATGGAGAGAATAGACAGGAGAAATCTCTATAAAAA TCTCATCACCTATAGTTACTTTGATTTAAATCCAATAGAAAAATGGATTTTTGTCAATTTAGATGAAAAACAAATATTAT CATTAGAAAGTAGGTTTTATGAGGAATTCGGATGGGATATATTTATCGATATCTATCCAATTCCTAAAATGGAAGAGCAT AACGTTTATATAATCTCAGATGAAGGCGTTAAAAGATTGGATGAAGTTTCTCCATTAGCTCAGAGCTTAAAGCCCTCTGA GATGAGATTATGGAATATTTCAATCTATGCACCAAAAGAAAAAATTAAAGAGCTTAGAGAGAACAATGTAAAGGACAGGA TAAATAAAATCTTAAAAGAGTTAGATGTTAAGGTTGAAAGCAAGTTAATTGACATTTTGAAAGAATATGGGACAATTACT GGAAAGAGAAGATTTTTAGAGATTGCTAAGGAAAGAGGCATTTCACCAAAAGAGTTTTACAATGAATTGCATAAATTGAT ATTCTGCGGTTTAATAAAAGAGAGATTTAATAGGAGGACGTATGTTTATTGTTTAAATAATTTTGTTAAATTATAA
Upstream 100 bases:
>100_bases TAATCTTTATTTTCAAATATTCATGTCTCTAAAATAAATTAAGAATGTAATATGATTGAAAATCTCAAAAAAAAGATAAA ATCAAAAGCTCTGGGAGAGA
Downstream 100 bases:
>100_bases ATAGTTTATAAAGTTCTTCAGCTAAAAGTTTGTATTTAACATACTTTTTAACTTCTTTTTTTGAATTTTTCTTTATCAAC ATAGTAAGGAATTCTAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MKVIRDSIHKDIYLDEKELEIIDSEEFQRLRNIKQTGLTYLVYPSANHTRFEHSLGTMFIASKIAEKINADVELTRVSAL LHDIGHPPFSHTLEICGYSHEVFGRKKIKHMNLDNFSKSEIIKTLNRKNLEGKIISGDVDADRMDYLLRDSYHTGTAYGM IDLPRILRSITTFESFGKVKIGILKKGIQAIESLLVARHQMYSAVYMHPTVRIADTMIKRAVIKEIQEKNLDIKDLANMD DIALVSFLRISENYLMERIDRRNLYKNLITYSYFDLNPIEKWIFVNLDEKQILSLESRFYEEFGWDIFIDIYPIPKMEEH NVYIISDEGVKRLDEVSPLAQSLKPSEMRLWNISIYAPKEKIKELRENNVKDRINKILKELDVKVESKLIDILKEYGTIT GKRRFLEIAKERGISPKEFYNELHKLIFCGLIKERFNRRTYVYCLNNFVKL
Sequences:
>Translated_451_residues MKVIRDSIHKDIYLDEKELEIIDSEEFQRLRNIKQTGLTYLVYPSANHTRFEHSLGTMFIASKIAEKINADVELTRVSAL LHDIGHPPFSHTLEICGYSHEVFGRKKIKHMNLDNFSKSEIIKTLNRKNLEGKIISGDVDADRMDYLLRDSYHTGTAYGM IDLPRILRSITTFESFGKVKIGILKKGIQAIESLLVARHQMYSAVYMHPTVRIADTMIKRAVIKEIQEKNLDIKDLANMD DIALVSFLRISENYLMERIDRRNLYKNLITYSYFDLNPIEKWIFVNLDEKQILSLESRFYEEFGWDIFIDIYPIPKMEEH NVYIISDEGVKRLDEVSPLAQSLKPSEMRLWNISIYAPKEKIKELRENNVKDRINKILKELDVKVESKLIDILKEYGTIT GKRRFLEIAKERGISPKEFYNELHKLIFCGLIKERFNRRTYVYCLNNFVKL >Mature_451_residues MKVIRDSIHKDIYLDEKELEIIDSEEFQRLRNIKQTGLTYLVYPSANHTRFEHSLGTMFIASKIAEKINADVELTRVSAL LHDIGHPPFSHTLEICGYSHEVFGRKKIKHMNLDNFSKSEIIKTLNRKNLEGKIISGDVDADRMDYLLRDSYHTGTAYGM IDLPRILRSITTFESFGKVKIGILKKGIQAIESLLVARHQMYSAVYMHPTVRIADTMIKRAVIKEIQEKNLDIKDLANMD DIALVSFLRISENYLMERIDRRNLYKNLITYSYFDLNPIEKWIFVNLDEKQILSLESRFYEEFGWDIFIDIYPIPKMEEH NVYIISDEGVKRLDEVSPLAQSLKPSEMRLWNISIYAPKEKIKELRENNVKDRINKILKELDVKVESKLIDILKEYGTIT GKRRFLEIAKERGISPKEFYNELHKLIFCGLIKERFNRRTYVYCLNNFVKL
Specific function: Unknown
COG id: COG1078
COG function: function code R; HD superfamily phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain
Homologues:
Organism=Homo sapiens, GI38016914, Length=279, Percent_Identity=28.3154121863799, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17537827, Length=102, Percent_Identity=43.1372549019608, Blast_Score=91, Evalue=8e-19, Organism=Caenorhabditis elegans, GI17537829, Length=102, Percent_Identity=43.1372549019608, Blast_Score=91, Evalue=8e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1154_METJA (Q58554)
Other databases:
- EMBL: L77117 - PIR: A64444 - RefSeq: NP_248146.1 - ProteinModelPortal: Q58554 - GeneID: 1452050 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1154 - NMPDR: fig|243232.1.peg.1183 - TIGR: MJ1154 - HOGENOM: HBG335288 - OMA: RNIKQTG - ProtClustDB: CLSK876474 - BioCyc: MJAN243232:MJ_1154-MONOMER - InterPro: IPR003607 - InterPro: IPR006675 - InterPro: IPR011991 - Gene3D: G3DSA:1.10.10.10 - SMART: SM00471 - TIGRFAMs: TIGR00277
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53001; Mature: 53001
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVIRDSIHKDIYLDEKELEIIDSEEFQRLRNIKQTGLTYLVYPSANHTRFEHSLGTMFI CCCHHHHHHHCCEECCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHH ASKIAEKINADVELTRVSALLHDIGHPPFSHTLEICGYSHEVFGRKKIKHMNLDNFSKSE HHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHH IIKTLNRKNLEGKIISGDVDADRMDYLLRDSYHTGTAYGMIDLPRILRSITTFESFGKVK HHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHCCEE IGILKKGIQAIESLLVARHQMYSAVYMHPTVRIADTMIKRAVIKEIQEKNLDIKDLANMD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC DIALVSFLRISENYLMERIDRRNLYKNLITYSYFDLNPIEKWIFVNLDEKQILSLESRFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHH EEFGWDIFIDIYPIPKMEEHNVYIISDEGVKRLDEVSPLAQSLKPSEMRLWNISIYAPKE HHCCCEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCHH KIKELRENNVKDRINKILKELDVKVESKLIDILKEYGTITGKRRFLEIAKERGISPKEFY HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHH NELHKLIFCGLIKERFNRRTYVYCLNNFVKL HHHHHHHHHHHHHHHHCCCEEEEEHHHHHCC >Mature Secondary Structure MKVIRDSIHKDIYLDEKELEIIDSEEFQRLRNIKQTGLTYLVYPSANHTRFEHSLGTMFI CCCHHHHHHHCCEECCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHH ASKIAEKINADVELTRVSALLHDIGHPPFSHTLEICGYSHEVFGRKKIKHMNLDNFSKSE HHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHH IIKTLNRKNLEGKIISGDVDADRMDYLLRDSYHTGTAYGMIDLPRILRSITTFESFGKVK HHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHCCEE IGILKKGIQAIESLLVARHQMYSAVYMHPTVRIADTMIKRAVIKEIQEKNLDIKDLANMD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC DIALVSFLRISENYLMERIDRRNLYKNLITYSYFDLNPIEKWIFVNLDEKQILSLESRFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHH EEFGWDIFIDIYPIPKMEEHNVYIISDEGVKRLDEVSPLAQSLKPSEMRLWNISIYAPKE HHCCCEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCHH KIKELRENNVKDRINKILKELDVKVESKLIDILKEYGTITGKRRFLEIAKERGISPKEFY HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHH NELHKLIFCGLIKERFNRRTYVYCLNNFVKL HHHHHHHHHHHHHHHHCCCEEEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087