| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669325
Identifier: 15669325
GI number: 15669325
Start: 1078691
End: 1079215
Strand: Direct
Name: 15669325
Synonym: MJ1138
Alternate gene names: NA
Gene position: 1078691-1079215 (Clockwise)
Preceding gene: 15669323
Following gene: 15669328
Centisome position: 64.79
GC content: 31.05
Gene sequence:
>525_bases ATGAAGAGTGTCAAAAAACTCCTCCTATTAGCTTTTGCCGTATGTTTGGCAGTGGGTTTTTCTGGATGTTTGGAGCAGCC AAAGATTGAAGTAGTTGGGCAGAAAATTCAAAAAGTAGATGCAGATAACACAAAGATAGAAATTCAAGTGTTGGTTGATA ATCCAAATCCTATTGGTATTAGCATAGATAAAATTTCATTTGATATTTATGCTTTAGTTGGTGGAGATAAGATATATTTA GGACACGGAGAGCAGAGTAACATTAAAATAACCTCTGGAAATACTACTTTCACTTTGCCAGTAACAATATCTAATAAAAA ACTTGTTGAAGTAGCTTTAAAAGAAAAAAGCACAAAAATCCCTATTGAGATTAAGGGAGATATAGCAGTTAATTTATTCA TAACAAAAGTAAATATTCCAATAGATATTCAGCAAGAGATAGATGTTTCTGCAATAGCAAAAGAAGAGGTGTTAAATCAA TTAAATAATTTAAATCCTAACCAAATACAATCAATAGCACAGTAA
Upstream 100 bases:
>100_bases TAAATCTCTCTCAAAGTTTCAACCTTTTTAGTTTATATTTAATATTGTTGTGAAAAGATATTAATATGTTTTATAACAAA AATGAATATTTGGTGATATT
Downstream 100 bases:
>100_bases TTTTATAACTTTTTGCAGATATTTAGATATATAATGCACTGATGAACGCCTTTAGGGCGTTCAAATATCATTTTTAATTT TTAATAATCGTAAAAAACTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MKSVKKLLLLAFAVCLAVGFSGCLEQPKIEVVGQKIQKVDADNTKIEIQVLVDNPNPIGISIDKISFDIYALVGGDKIYL GHGEQSNIKITSGNTTFTLPVTISNKKLVEVALKEKSTKIPIEIKGDIAVNLFITKVNIPIDIQQEIDVSAIAKEEVLNQ LNNLNPNQIQSIAQ
Sequences:
>Translated_174_residues MKSVKKLLLLAFAVCLAVGFSGCLEQPKIEVVGQKIQKVDADNTKIEIQVLVDNPNPIGISIDKISFDIYALVGGDKIYL GHGEQSNIKITSGNTTFTLPVTISNKKLVEVALKEKSTKIPIEIKGDIAVNLFITKVNIPIDIQQEIDVSAIAKEEVLNQ LNNLNPNQIQSIAQ >Mature_174_residues MKSVKKLLLLAFAVCLAVGFSGCLEQPKIEVVGQKIQKVDADNTKIEIQVLVDNPNPIGISIDKISFDIYALVGGDKIYL GHGEQSNIKITSGNTTFTLPVTISNKKLVEVALKEKSTKIPIEIKGDIAVNLFITKVNIPIDIQQEIDVSAIAKEEVLNQ LNNLNPNQIQSIAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1138_METJA (Q58538)
Other databases:
- EMBL: L77117 - PIR: A64442 - RefSeq: NP_248130.1 - ProteinModelPortal: Q58538 - GeneID: 1452034 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1138 - NMPDR: fig|243232.1.peg.1167 - TIGR: MJ1138 - OMA: IKITSGN - ProtClustDB: CLSK2517690 - BioCyc: MJAN243232:MJ_1138-MONOMER - InterPro: IPR013783 - InterPro: IPR004864 - Gene3D: G3DSA:2.60.40.10
Pfam domain/function: PF03168 LEA_2
EC number: NA
Molecular weight: Translated: 18948; Mature: 18948
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xd566684)-;
Cys/Met content:
1.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSVKKLLLLAFAVCLAVGFSGCLEQPKIEVVGQKIQKVDADNTKIEIQVLVDNPNPIGI CCHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEE SIDKISFDIYALVGGDKIYLGHGEQSNIKITSGNTTFTLPVTISNKKLVEVALKEKSTKI EEEEEEEEEEEEECCCEEEEECCCCCCEEEECCCEEEEEEEEECCCEEEEEEECCCCCCC PIEIKGDIAVNLFITKVNIPIDIQQEIDVSAIAKEEVLNQLNNLNPNQIQSIAQ CEEEECCEEEEEEEEEEECCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHCH >Mature Secondary Structure MKSVKKLLLLAFAVCLAVGFSGCLEQPKIEVVGQKIQKVDADNTKIEIQVLVDNPNPIGI CCHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEE SIDKISFDIYALVGGDKIYLGHGEQSNIKITSGNTTFTLPVTISNKKLVEVALKEKSTKI EEEEEEEEEEEEECCCEEEEECCCCCCEEEECCCEEEEEEEEECCCEEEEEEECCCCCCC PIEIKGDIAVNLFITKVNIPIDIQQEIDVSAIAKEEVLNQLNNLNPNQIQSIAQ CEEEECCEEEEEEEEEEECCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087