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The map label for this gene is yigC [C]

Identifier: 15669320

GI number: 15669320

Start: 1073587

End: 1074852

Strand: Direct

Name: yigC [C]

Synonym: MJ1133

Alternate gene names: 15669320

Gene position: 1073587-1074852 (Clockwise)

Preceding gene: 15669314

Following gene: 15669323

Centisome position: 64.48

GC content: 33.81

Gene sequence:

>1266_bases
ATGAGAGAAATCATTAATAAACTTAATCCCATTATAATAGACAAAGCCGATAAAAAGTTTGGAGTTTCAAGAATATTAAA
AAAATATGATGGAAAACCAGTTTATATAAAAGATGTAAATGGATTTGAAGTTGTTGGAAATCTTTGCAGTAGGGAAACCC
TTTCAAAGATTTTTAATGTTAAAAAGGAGGATTTTATATTCTTTATGCTTGATGCAATGGAAAAGGAAAAAGAAGGAAAA
TTAAAGATAAACAATAAATTGAAAGAGAAATATATTGTTGAAATCCCAGAGAATATTAAAAACTGGCCAATTCCAATATA
CTACGAGAAGGATGCGGGAGCTTATATAACAAGTGGGGTTGTTGTTGTCTATGATAAAGATTACGGCTATAACTTATCAA
TTCATAGAATTTTGGTTAAAGATGATTATTTAGTTATAAGAATGGTTGAACAAAGGCATTTACACTTTTTATATAATAAA
GCTCTAAAGGAAAAGGGATATTTGGATGTTGCTATAGTTATAGGAGTTCATCCAGCTGTTTTGTTGGCTGGCTCTACCTC
TGCTGATATAACATTTGATGAGCTAAAATTTGCAGCTGCTTTGTTGGGAGGAGAGATAGGGGTTTTTGAGTTGGATAATG
GCTTGTTAGTTCCAGAGGCAGAGTTTATCATTGAGGGTAAGATATTGCCAGAGGTTGATGATGAGGGGCCTTTTGTAGAT
ATAACTGGAACTTATGATATTGTTAGAAAGCAGCCAATAATTAAGATTGAGAAACTTTATAGGAAGGAAAAACCTATATT
CCACGCTTTATTACCGGGAGGGATTGAACATAAAACATTGATGGGAATGCCTCAAGAGCCAAGAATTTTGAAGGGAGTTA
GAAATACCGTTCCGACAGTAAAAAATATTGTTTTAACTGAGGGAGGTTGTTGCTGGCTTCATGCTGTTGTTCAGATAGAG
AAGAGGACAGAAGGAGATGGGAAAAATGCTATATTGGCAGCATTTGCTTCCCATCCAAGTTTGAAGCATGTGATTGTAGT
TGATGATGACATAAATATATTTGATATAAATGATGTTGAGTATGCAATAGCCACAAGGGTTCAAGGAGATAAAGATATAG
TTATTATTTCTGGAGCCAAAGGTTCTTCTTTAGATCCTTCGAGTGATTTAAAAAATAAACTAACAGCAAAAGTGGGGGTA
GATGCAACTATGAGTTTGATTAAAGGTAGAGAGCATTTTGAGAGAGCCAAGATTCCTGATAAATGA

Upstream 100 bases:

>100_bases
TAAAAAGGTATTTATGAACGCCTTCCTTTTGGAAGGCGTTTAAACTTTCCTTAATAAATTTTATTACTTTGCAAAAAACT
ATAAAAACTTTGGTGGTATC

Downstream 100 bases:

>100_bases
GTTGAAGGTAAAAAGGAATGATTTAAAAAGATTTAAGTTTAATTATCAACTCTCCAAACAATTTTTCTTGAATCAACTCT
GCCTTTCCATCATTAGCTAA

Product: hypothetical protein

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MREIINKLNPIIIDKADKKFGVSRILKKYDGKPVYIKDVNGFEVVGNLCSRETLSKIFNVKKEDFIFFMLDAMEKEKEGK
LKINNKLKEKYIVEIPENIKNWPIPIYYEKDAGAYITSGVVVVYDKDYGYNLSIHRILVKDDYLVIRMVEQRHLHFLYNK
ALKEKGYLDVAIVIGVHPAVLLAGSTSADITFDELKFAAALLGGEIGVFELDNGLLVPEAEFIIEGKILPEVDDEGPFVD
ITGTYDIVRKQPIIKIEKLYRKEKPIFHALLPGGIEHKTLMGMPQEPRILKGVRNTVPTVKNIVLTEGGCCWLHAVVQIE
KRTEGDGKNAILAAFASHPSLKHVIVVDDDINIFDINDVEYAIATRVQGDKDIVIISGAKGSSLDPSSDLKNKLTAKVGV
DATMSLIKGREHFERAKIPDK

Sequences:

>Translated_421_residues
MREIINKLNPIIIDKADKKFGVSRILKKYDGKPVYIKDVNGFEVVGNLCSRETLSKIFNVKKEDFIFFMLDAMEKEKEGK
LKINNKLKEKYIVEIPENIKNWPIPIYYEKDAGAYITSGVVVVYDKDYGYNLSIHRILVKDDYLVIRMVEQRHLHFLYNK
ALKEKGYLDVAIVIGVHPAVLLAGSTSADITFDELKFAAALLGGEIGVFELDNGLLVPEAEFIIEGKILPEVDDEGPFVD
ITGTYDIVRKQPIIKIEKLYRKEKPIFHALLPGGIEHKTLMGMPQEPRILKGVRNTVPTVKNIVLTEGGCCWLHAVVQIE
KRTEGDGKNAILAAFASHPSLKHVIVVDDDINIFDINDVEYAIATRVQGDKDIVIISGAKGSSLDPSSDLKNKLTAKVGV
DATMSLIKGREHFERAKIPDK
>Mature_421_residues
MREIINKLNPIIIDKADKKFGVSRILKKYDGKPVYIKDVNGFEVVGNLCSRETLSKIFNVKKEDFIFFMLDAMEKEKEGK
LKINNKLKEKYIVEIPENIKNWPIPIYYEKDAGAYITSGVVVVYDKDYGYNLSIHRILVKDDYLVIRMVEQRHLHFLYNK
ALKEKGYLDVAIVIGVHPAVLLAGSTSADITFDELKFAAALLGGEIGVFELDNGLLVPEAEFIIEGKILPEVDDEGPFVD
ITGTYDIVRKQPIIKIEKLYRKEKPIFHALLPGGIEHKTLMGMPQEPRILKGVRNTVPTVKNIVLTEGGCCWLHAVVQIE
KRTEGDGKNAILAAFASHPSLKHVIVVDDDINIFDINDVEYAIATRVQGDKDIVIISGAKGSSLDPSSDLKNKLTAKVGV
DATMSLIKGREHFERAKIPDK

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family

Homologues:

Organism=Escherichia coli, GI1790277, Length=320, Percent_Identity=30.625, Blast_Score=114, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1133_METJA (Q58533)

Other databases:

- EMBL:   L77117
- PIR:   D64441
- RefSeq:   NP_248125.1
- ProteinModelPortal:   Q58533
- GeneID:   1452029
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1133
- NMPDR:   fig|243232.1.peg.1162
- TIGR:   MJ1133
- HOGENOM:   HBG564733
- OMA:   PFVDITG
- ProtClustDB:   CLSK876465
- BioCyc:   MJAN243232:MJ_1133-MONOMER
- InterPro:   IPR002830
- InterPro:   IPR009002
- TIGRFAMs:   TIGR00148

Pfam domain/function: PF01977 UbiD; SSF50475 FMN_binding

EC number: NA

Molecular weight: Translated: 47216; Mature: 47216

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREIINKLNPIIIDKADKKFGVSRILKKYDGKPVYIKDVNGFEVVGNLCSRETLSKIFNV
CHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCC
KKEDFIFFMLDAMEKEKEGKLKINNKLKEKYIVEIPENIKNWPIPIYYEKDAGAYITSGV
CCCCEEEEEEEHHCCCCCCCEEECCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEECCE
VVVYDKDYGYNLSIHRILVKDDYLVIRMVEQRHLHFLYNKALKEKGYLDVAIVIGVHPAV
EEEEECCCCCCEEEEEEEEECCEEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEE
LLAGSTSADITFDELKFAAALLGGEIGVFELDNGLLVPEAEFIIEGKILPEVDDEGPFVD
EEECCCCCCEEHHHHHHHHHHHCCCEEEEECCCCEECCCCCEEEECCCCCCCCCCCCEEE
ITGTYDIVRKQPIIKIEKLYRKEKPIFHALLPGGIEHKTLMGMPQEPRILKGVRNTVPTV
EECCHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHCCCCCCCCHHHHHHHHCCCCH
KNIVLTEGGCCWLHAVVQIEKRTEGDGKNAILAAFASHPSLKHVIVVDDDINIFDINDVE
HEEEEECCCCEEEEEEHHHECCCCCCCCCEEEEEECCCCCEEEEEEEECCCCEEECCCCE
YAIATRVQGDKDIVIISGAKGSSLDPSSDLKNKLTAKVGVDATMSLIKGREHFERAKIPD
EEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHEEECCCHHHHHHHHCHHHHHHCCCCC
K
C
>Mature Secondary Structure
MREIINKLNPIIIDKADKKFGVSRILKKYDGKPVYIKDVNGFEVVGNLCSRETLSKIFNV
CHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCC
KKEDFIFFMLDAMEKEKEGKLKINNKLKEKYIVEIPENIKNWPIPIYYEKDAGAYITSGV
CCCCEEEEEEEHHCCCCCCCEEECCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEECCE
VVVYDKDYGYNLSIHRILVKDDYLVIRMVEQRHLHFLYNKALKEKGYLDVAIVIGVHPAV
EEEEECCCCCCEEEEEEEEECCEEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEE
LLAGSTSADITFDELKFAAALLGGEIGVFELDNGLLVPEAEFIIEGKILPEVDDEGPFVD
EEECCCCCCEEHHHHHHHHHHHCCCEEEEECCCCEECCCCCEEEECCCCCCCCCCCCEEE
ITGTYDIVRKQPIIKIEKLYRKEKPIFHALLPGGIEHKTLMGMPQEPRILKGVRNTVPTV
EECCHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHCCCCCCCCHHHHHHHHCCCCH
KNIVLTEGGCCWLHAVVQIEKRTEGDGKNAILAAFASHPSLKHVIVVDDDINIFDINDVE
HEEEEECCCCEEEEEEHHHECCCCCCCCCEEEEEECCCCCEEEEEEEECCCCEEECCCCE
YAIATRVQGDKDIVIISGAKGSSLDPSSDLKNKLTAKVGVDATMSLIKGREHFERAKIPD
EEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHEEECCCHHHHHHHHCHHHHHHCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087