| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669315
Identifier: 15669315
GI number: 15669315
Start: 1069044
End: 1069970
Strand: Reverse
Name: 15669315
Synonym: MJ1128
Alternate gene names: NA
Gene position: 1069970-1069044 (Counterclockwise)
Preceding gene: 15669316
Following gene: 15669312
Centisome position: 64.26
GC content: 31.82
Gene sequence:
>927_bases GTGATTCTTATGAAGAAATTTGAAATTATTCTTTTTTTATTTATAGCCGTTTTAATCTTTGTTTTCGGATATTTTGTTGG AGCATCTCAACCTTTATATTCTGAAAATCCAGTTATCCAATATTTCAAAAATCCAAAACCTTTTACAGTTGAAAATGTAA ATATGCCAGTTACTTACTATGGCACGATATGTGGAAAGTATATTGGTTATCAGATAACTCCCCACAATGTCAATGAAGAG GCAAGAAAATGTTTCTATAAATATTTTAAGTTAAAAGATAAAAATCCTAAAGAGGCTGAGAGATATTTAAAAAGAGGACT ATTTTTAACAGAGTATCTAATATCTCAAGCAGATAAAGAAACTGCTGAAGTAGATGAAAAGAACATCACTTTTATTGTTT GGAGGTATAATTTTGAATTCCCACTTTATAATCTATCTAAGGGTTGGAGAGGAGCATTATGCCAAGCAGGCTGCTTAAAG ACCTTATATTTAGCTTATGAAGCTACTGGAGATGAGAGGTATTTAAATTATGCAAATTTAGCCATAAATGCCTTCAAAGT TCCTGTTGAAAAAGGAGGGTTATTAAAAATCAGAATCTATAAAAATAAAAGCTACTATTGGTTTCCAGAGTATGCATCTG AAAATCCACCCTATGTGCTAAATGGGTTTATCACAGCCACTCTATGGATTGGAGACTTTGGAAACAAAACAGGGAACGCT GATGCTCTATACCTTTACAAAGAAGGTTTAAAATCAATAAAAACATTTCTTCCAATGTATGATGCTGGAGATTGGAGTTA TTACGATGCTTTAGGTCATAGATGCAATAAACATTATGAACATCTACATAGACTGCAGATGCTATGGCTTTACAATAAAA CAGGAGATGAGATATACCTAAAATACTACAAAAAATGGAGAGAATAG
Upstream 100 bases:
>100_bases CAGTTAAATCATTGGAAGGTGTTAAAAAAGTTGAGGTTACTGTAGAAGGGCATGTAATGGAGAAGGACATTAATGAGATG CTTAAAGAGAAAGAATAAAA
Downstream 100 bases:
>100_bases TTACAATTCTAAATCCATATCATAAATCCTCTCTATATTCTCCTTATGGATTTTATAAACACCCTCTTCATCCAAAACTC CCTTCTCAATCAATCTCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MILMKKFEIILFLFIAVLIFVFGYFVGASQPLYSENPVIQYFKNPKPFTVENVNMPVTYYGTICGKYIGYQITPHNVNEE ARKCFYKYFKLKDKNPKEAERYLKRGLFLTEYLISQADKETAEVDEKNITFIVWRYNFEFPLYNLSKGWRGALCQAGCLK TLYLAYEATGDERYLNYANLAINAFKVPVEKGGLLKIRIYKNKSYYWFPEYASENPPYVLNGFITATLWIGDFGNKTGNA DALYLYKEGLKSIKTFLPMYDAGDWSYYDALGHRCNKHYEHLHRLQMLWLYNKTGDEIYLKYYKKWRE
Sequences:
>Translated_308_residues MILMKKFEIILFLFIAVLIFVFGYFVGASQPLYSENPVIQYFKNPKPFTVENVNMPVTYYGTICGKYIGYQITPHNVNEE ARKCFYKYFKLKDKNPKEAERYLKRGLFLTEYLISQADKETAEVDEKNITFIVWRYNFEFPLYNLSKGWRGALCQAGCLK TLYLAYEATGDERYLNYANLAINAFKVPVEKGGLLKIRIYKNKSYYWFPEYASENPPYVLNGFITATLWIGDFGNKTGNA DALYLYKEGLKSIKTFLPMYDAGDWSYYDALGHRCNKHYEHLHRLQMLWLYNKTGDEIYLKYYKKWRE >Mature_308_residues MILMKKFEIILFLFIAVLIFVFGYFVGASQPLYSENPVIQYFKNPKPFTVENVNMPVTYYGTICGKYIGYQITPHNVNEE ARKCFYKYFKLKDKNPKEAERYLKRGLFLTEYLISQADKETAEVDEKNITFIVWRYNFEFPLYNLSKGWRGALCQAGCLK TLYLAYEATGDERYLNYANLAINAFKVPVEKGGLLKIRIYKNKSYYWFPEYASENPPYVLNGFITATLWIGDFGNKTGNA DALYLYKEGLKSIKTFLPMYDAGDWSYYDALGHRCNKHYEHLHRLQMLWLYNKTGDEIYLKYYKKWRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI51317380, Length=178, Percent_Identity=29.2134831460674, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71980724, Length=181, Percent_Identity=29.2817679558011, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI281360211, Length=175, Percent_Identity=32, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI21687054, Length=175, Percent_Identity=32, Blast_Score=76, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1128_METJA (Q58528)
Other databases:
- EMBL: L77117 - PIR: G64440 - RefSeq: NP_248120.1 - ProteinModelPortal: Q58528 - GeneID: 1452024 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1128 - NMPDR: fig|243232.1.peg.1157 - TIGR: MJ1128 - OMA: FPEYASE - ProtClustDB: CLSK2517689 - BioCyc: MJAN243232:MJ_1128-MONOMER - InterPro: IPR010598
Pfam domain/function: PF06662 C5-epim_C
EC number: NA
Molecular weight: Translated: 36443; Mature: 36443
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILMKKFEIILFLFIAVLIFVFGYFVGASQPLYSENPVIQYFKNPKPFTVENVNMPVTYY CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEEEECCCCCEEEH GTICGKYIGYQITPHNVNEEARKCFYKYFKLKDKNPKEAERYLKRGLFLTEYLISQADKE HHHHHHHHCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHCCCH TAEVDEKNITFIVWRYNFEFPLYNLSKGWRGALCQAGCLKTLYLAYEATGDERYLNYANL HHHCCCCCEEEEEEEEEECCCCEECCCCCCCHHHHHHHHHHHEEEEECCCCHHEEEHHHE AINAFKVPVEKGGLLKIRIYKNKSYYWFPEYASENPPYVLNGFITATLWIGDFGNKTGNA EEEEEEEEECCCCEEEEEEEECCCEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCC DALYLYKEGLKSIKTFLPMYDAGDWSYYDALGHRCNKHYEHLHRLQMLWLYNKTGDEIYL CEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHH KYYKKWRE HHHHHHCC >Mature Secondary Structure MILMKKFEIILFLFIAVLIFVFGYFVGASQPLYSENPVIQYFKNPKPFTVENVNMPVTYY CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCEEEECCCCCEEEH GTICGKYIGYQITPHNVNEEARKCFYKYFKLKDKNPKEAERYLKRGLFLTEYLISQADKE HHHHHHHHCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHCCCH TAEVDEKNITFIVWRYNFEFPLYNLSKGWRGALCQAGCLKTLYLAYEATGDERYLNYANL HHHCCCCCEEEEEEEEEECCCCEECCCCCCCHHHHHHHHHHHEEEEECCCCHHEEEHHHE AINAFKVPVEKGGLLKIRIYKNKSYYWFPEYASENPPYVLNGFITATLWIGDFGNKTGNA EEEEEEEEECCCCEEEEEEEECCCEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCC DALYLYKEGLKSIKTFLPMYDAGDWSYYDALGHRCNKHYEHLHRLQMLWLYNKTGDEIYL CEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHH KYYKKWRE HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087