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The map label for this gene is trkA

Identifier: 15669293

GI number: 15669293

Start: 1045139

End: 1045795

Strand: Reverse

Name: trkA

Synonym: MJ1105

Alternate gene names: 15669293

Gene position: 1045795-1045139 (Counterclockwise)

Preceding gene: 15669294

Following gene: 15669292

Centisome position: 62.81

GC content: 33.18

Gene sequence:

>657_bases
ATGTATATAATAATAGCTGGGATTGGTAGAGTTGGTTATACATTAGCTAAATCTCTATCTGAAAAAGGACACGACATTGT
TTTAATTGACATAGATAAAGATATCTGCAAAAAAGCATCTGCAGAGATTGATGCTTTAGTGATTAATGGAGACTGCACAA
AGATAAAAACATTGGAGGATGCTGGAATAGAGGATGCAGATATGTATATAGCAGTTACTGGAAAGGAGGAAGTTAATTTA
ATGAGTTCATTATTAGCAAAGAGTTATGGGATTAATAAAACCATTGCAAGGATTTCAGAAATTGAGTATAAGGATGTTTT
TGAACGGTTAGGAGTTGATGTAGTTGTGTCTCCTGAGCTTATAGCTGCCAATTATATAGAAAAGCTTATAGAAAGACCTG
GAATCTTAGATTTGGCTATTGTAGGTAGAGGAGAAGCAGAGATTTTAGAATTCATAATTCCTGAAAAAGCTAAGGTAGTT
AATAAAAAGATTAAAGAACTTGGAAGACCTCAAGATTATTTGATAATAGCCATATATGATGGGGATGAGCTGAAAATTCC
TAGTGGAGATACTGAACTAAAATCTGGAGATAGGGTTTTAGTTTTAGTTAAGAAAGATGCCGCTGATGCTATAAGAAAGA
TGTTTTTAGAGGAATAA

Upstream 100 bases:

>100_bases
TTATAAAACTGTGAAAGTCCTGTGCCAATAGGGCGAAGCCCTATGGTGATGAATATTATGAAAAAATAATCCTATAATTA
AAGTTTTTTGGTGTCAAACT

Downstream 100 bases:

>100_bases
AATTAAAAATGAGGGAAATCATGAAAGTTAGAGTGAAAGCTCCCTGCACATCAGCAAATTTAGGAGTTGGTTTTGATGTG
TTTGGTTTATGTTTAAAAGA

Product: TRK system potassium uptake protein TrkA

Products: NA

Alternate protein names: K(+)-uptake protein trkA homolog

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVNL
MSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVSPELIAANYIEKLIERPGILDLAIVGRGEAEILEFIIPEKAKVV
NKKIKELGRPQDYLIIAIYDGDELKIPSGDTELKSGDRVLVLVKKDAADAIRKMFLEE

Sequences:

>Translated_218_residues
MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVNL
MSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVSPELIAANYIEKLIERPGILDLAIVGRGEAEILEFIIPEKAKVV
NKKIKELGRPQDYLIIAIYDGDELKIPSGDTELKSGDRVLVLVKKDAADAIRKMFLEE
>Mature_218_residues
MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVNL
MSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVSPELIAANYIEKLIERPGILDLAIVGRGEAEILEFIIPEKAKVV
NKKIKELGRPQDYLIIAIYDGDELKIPSGDTELKSGDRVLVLVKKDAADAIRKMFLEE

Specific function: Part of a potassium transport system

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain

Homologues:

Organism=Escherichia coli, GI1789685, Length=227, Percent_Identity=28.1938325991189, Blast_Score=84, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TRKA_METJA (Q58505)

Other databases:

- EMBL:   L77117
- PIR:   H64437
- RefSeq:   NP_248098.1
- PDB:   1LSS
- PDBsum:   1LSS
- ProteinModelPortal:   Q58505
- SMR:   Q58505
- GeneID:   1452002
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1105
- NMPDR:   fig|243232.1.peg.1135
- TIGR:   MJ1105
- HOGENOM:   HBG312741
- OMA:   LLATEYE
- ProtClustDB:   CLSK876452
- BioCyc:   MJAN243232:MJ_1105-MONOMER
- GO:   GO:0005488
- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148
- Gene3D:   G3DSA:3.40.50.720
- PRINTS:   PR00335

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N

EC number: NA

Molecular weight: Translated: 23996; Mature: 23996

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS51202 RCK_C; PS51201 RCK_N

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLED
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCCEEEEEECCCCCEEEEHHH
AGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVSPEL
CCCCCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHCCCCEEECCHH
IAANYIEKLIERPGILDLAIVGRGEAEILEFIIPEKAKVVNKKIKELGRPQDYLIIAIYD
HHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEEC
GDELKIPSGDTELKSGDRVLVLVKKDAADAIRKMFLEE
CCEEECCCCCCCCCCCCEEEEEEECCHHHHHHHHHCCC
>Mature Secondary Structure
MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLED
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCCEEEEEECCCCCEEEEHHH
AGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVSPEL
CCCCCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHCCCCEEECCHH
IAANYIEKLIERPGILDLAIVGRGEAEILEFIIPEKAKVVNKKIKELGRPQDYLIIAIYD
HHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEEC
GDELKIPSGDTELKSGDRVLVLVKKDAADAIRKMFLEE
CCEEECCCCCCCCCCCCEEEEEEECCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087