| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669274
Identifier: 15669274
GI number: 15669274
Start: 1025157
End: 1026179
Strand: Direct
Name: 15669274
Synonym: MJ1086
Alternate gene names: NA
Gene position: 1025157-1026179 (Clockwise)
Preceding gene: 15669273
Following gene: 15669275
Centisome position: 61.57
GC content: 28.35
Gene sequence:
>1023_bases ATGAAGGTTAGAATTAGGGACTTTATAGAAACGACTGAAGGTTTATATTTTGCAGTAAATACCTATGCCCATCCAAAAAA TAAATTTTTTGCATTTTTAAGATATGTCCCATATGAGTTTGTAGATTTTAAAATAGAAGATAATAACATTAGAGAGATTA ATGGAAGAAAGTATATAAAGATGGCTGAAAGCAAAATTGCCTATAAGTTTTTAGAGGAAAAATTTAGCAAATACTTATAT TATGATGAAACAATCAATGTTTTAATGCATGCTATTCCAAAAGAAGATGTTAAAAGAATTTTAAGACCAAAAGAAAGATT AAATGAAATTATTAACGAAGAAAATAATTTAAATGAATTAGAAGAAAAATGTAGGAAATTAGCTCTAATATTGGAAGATT ATGGAGTTCCAATTAAAAGCATGGGAGTTAGCGGATCTTTATTGTTAAAATTAAACAACAAAAATTCAGATATTGACTTT GTAATTTATGGAAAAGATATGCACAAAAAAGCAAGAGAAGCATTAAAGCAGGCATTTGAAGATAATAAGTTAAAACCACT ATCTGATGATTTTTGGAAAATTGCCTATAAAAAAAGGATTAAAGATAAAACTTTAACCTACGAAGAATTTGTATTCTATG AAAAAAGGAAATATAACAGAGGAATTGTGGATAACACAATGTTTGACTTATTATTTACAAGGGAATGGGATGAGATAACT GAAAAATATGGAGATAAGAGATATAAAAACTTAGGATTTGCAAAAATAGAGGGAAGAGTTTTAAATGATGATTTTGCCTT TGATAATCCAGCAGTTTATAAAATAGAGTGCTACAATGATGAAGATATAAAGGAAGTTGTTTCTTTCACTCACACCTATG CTGGGCAGTGCTTTAATGGAGAGGAGATTGTAGCAAGAGGAAAGTTGGAGGAGGTTATTGATAAAAGTGGAGAAAGATAT AAGAGGATTGTTGTAGGAACTACAAGAGAGGCGTTTAATGAATACATAAAAATAAAAAGATAA
Upstream 100 bases:
>100_bases TTGAAAATGGAGAGATTAATTTAGATATTGAGTTATTGAGAAAGCTATATACTGAAGTTGTTACAAAAAGAATTGAAAAG ATAAAATCAAATGTGGTATC
Downstream 100 bases:
>100_bases AATAGGGCTTGTTATGATAATTGAAACACCATCAAAAGTTATACTATTCGGAGAGCATGCAGTTGTTTATGGTTATAGAG CTATATCTATGGCTATTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MKVRIRDFIETTEGLYFAVNTYAHPKNKFFAFLRYVPYEFVDFKIEDNNIREINGRKYIKMAESKIAYKFLEEKFSKYLY YDETINVLMHAIPKEDVKRILRPKERLNEIINEENNLNELEEKCRKLALILEDYGVPIKSMGVSGSLLLKLNNKNSDIDF VIYGKDMHKKAREALKQAFEDNKLKPLSDDFWKIAYKKRIKDKTLTYEEFVFYEKRKYNRGIVDNTMFDLLFTREWDEIT EKYGDKRYKNLGFAKIEGRVLNDDFAFDNPAVYKIECYNDEDIKEVVSFTHTYAGQCFNGEEIVARGKLEEVIDKSGERY KRIVVGTTREAFNEYIKIKR
Sequences:
>Translated_340_residues MKVRIRDFIETTEGLYFAVNTYAHPKNKFFAFLRYVPYEFVDFKIEDNNIREINGRKYIKMAESKIAYKFLEEKFSKYLY YDETINVLMHAIPKEDVKRILRPKERLNEIINEENNLNELEEKCRKLALILEDYGVPIKSMGVSGSLLLKLNNKNSDIDF VIYGKDMHKKAREALKQAFEDNKLKPLSDDFWKIAYKKRIKDKTLTYEEFVFYEKRKYNRGIVDNTMFDLLFTREWDEIT EKYGDKRYKNLGFAKIEGRVLNDDFAFDNPAVYKIECYNDEDIKEVVSFTHTYAGQCFNGEEIVARGKLEEVIDKSGERY KRIVVGTTREAFNEYIKIKR >Mature_340_residues MKVRIRDFIETTEGLYFAVNTYAHPKNKFFAFLRYVPYEFVDFKIEDNNIREINGRKYIKMAESKIAYKFLEEKFSKYLY YDETINVLMHAIPKEDVKRILRPKERLNEIINEENNLNELEEKCRKLALILEDYGVPIKSMGVSGSLLLKLNNKNSDIDF VIYGKDMHKKAREALKQAFEDNKLKPLSDDFWKIAYKKRIKDKTLTYEEFVFYEKRKYNRGIVDNTMFDLLFTREWDEIT EKYGDKRYKNLGFAKIEGRVLNDDFAFDNPAVYKIECYNDEDIKEVVSFTHTYAGQCFNGEEIVARGKLEEVIDKSGERY KRIVVGTTREAFNEYIKIKR
Specific function: Unknown
COG id: COG1665
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1086_METJA (Q58486)
Other databases:
- EMBL: L77117 - PIR: E64435 - RefSeq: NP_248079.1 - ProteinModelPortal: Q58486 - GeneID: 1451982 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1086 - NMPDR: fig|243232.1.peg.1116 - TIGR: MJ1086 - HOGENOM: HBG541710 - OMA: VSFTHTY - ProtClustDB: CLSK862749 - BioCyc: MJAN243232:MJ_1086-MONOMER - InterPro: IPR002934
Pfam domain/function: PF01909 NTP_transf_2
EC number: NA
Molecular weight: Translated: 40555; Mature: 40555
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVRIRDFIETTEGLYFAVNTYAHPKNKFFAFLRYVPYEFVDFKIEDNNIREINGRKYIK CCEEHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCEEECCCCCHHH MAESKIAYKFLEEKFSKYLYYDETINVLMHAIPKEDVKRILRPKERLNEIINEENNLNEL HHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHCCCCCHHHH EEKCRKLALILEDYGVPIKSMGVSGSLLLKLNNKNSDIDFVIYGKDMHKKAREALKQAFE HHHHHHHHHHHHHCCCCHHHCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHH DNKLKPLSDDFWKIAYKKRIKDKTLTYEEFVFYEKRKYNRGIVDNTMFDLLFTREWDEIT CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHH EKYGDKRYKNLGFAKIEGRVLNDDFAFDNPAVYKIECYNDEDIKEVVSFTHTYAGQCFNG HHHCCHHHHCCCEEEECCEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCC EEIVARGKLEEVIDKSGERYKRIVVGTTREAFNEYIKIKR CHHHHCCCHHHHHHCCCCCEEEEEEECCHHHHHHHHCCCC >Mature Secondary Structure MKVRIRDFIETTEGLYFAVNTYAHPKNKFFAFLRYVPYEFVDFKIEDNNIREINGRKYIK CCEEHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCEEECCCCCHHH MAESKIAYKFLEEKFSKYLYYDETINVLMHAIPKEDVKRILRPKERLNEIINEENNLNEL HHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHCCCCCHHHH EEKCRKLALILEDYGVPIKSMGVSGSLLLKLNNKNSDIDFVIYGKDMHKKAREALKQAFE HHHHHHHHHHHHHCCCCHHHCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHH DNKLKPLSDDFWKIAYKKRIKDKTLTYEEFVFYEKRKYNRGIVDNTMFDLLFTREWDEIT CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHH EKYGDKRYKNLGFAKIEGRVLNDDFAFDNPAVYKIECYNDEDIKEVVSFTHTYAGQCFNG HHHCCHHHHCCCEEEECCEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCC EEIVARGKLEEVIDKSGERYKRIVVGTTREAFNEYIKIKR CHHHHCCCHHHHHHCCCCCEEEEEEECCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087