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The map label for this gene is yjbQ [C]

Identifier: 15669269

GI number: 15669269

Start: 1021220

End: 1021636

Strand: Direct

Name: yjbQ [C]

Synonym: MJ1081

Alternate gene names: 15669269

Gene position: 1021220-1021636 (Clockwise)

Preceding gene: 15669249

Following gene: 15669270

Centisome position: 61.34

GC content: 31.89

Gene sequence:

>417_bases
TTGTTGGTGATAAAAATGCTATTTAAATATCAAATAAAAACCAACAAAAGAGAGGAATTGGTAGATATAACTCCTTATAT
AATATCAGCAATCTCCGAATCAAAAGTTAAAGATGGAATAGCAGTTATCTATGTTCCTCACACAACCGCTGGAATAACTA
TAAATGAAAATGCAGACCCATCAGTAAAGCATGATATTATAAACTTTCTCTCTCATCTTATTCCAAAAAATTGGAATTTT
ACACACTTAGAAGGGAATTCAGATGCACATATAAAAAGCTCTTTAGTTGGCTGTTCTCAGACAATTATTATTAAAGATGG
AAAGCCATTATTAGGAACTTGGCAGGGAATATTTTTTGCAGAGTTTGATGGGCCGAGAAGGAGAGAGTTTTATGTGAAGA
TAATAGGTGATAAATAA

Upstream 100 bases:

>100_bases
TATAACTATTCAAGTTTAATATTTAAAATTTAATTAAGGTCTTATCACATCAAATCAAAAACATATCAAAAATTTAATTG
GGTATTGCGGATATAAAATC

Downstream 100 bases:

>100_bases
TTATTTCATTGTGATATCATGAAAGAATTTATTATAAATAGACTAAAAAAATTTACAATTGAAGATTTAATGAGATGTAT
TTTAGGATTGCAAGAGATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MLVIKMLFKYQIKTNKREELVDITPYIISAISESKVKDGIAVIYVPHTTAGITINENADPSVKHDIINFLSHLIPKNWNF
THLEGNSDAHIKSSLVGCSQTIIIKDGKPLLGTWQGIFFAEFDGPRRREFYVKIIGDK

Sequences:

>Translated_138_residues
MLVIKMLFKYQIKTNKREELVDITPYIISAISESKVKDGIAVIYVPHTTAGITINENADPSVKHDIINFLSHLIPKNWNF
THLEGNSDAHIKSSLVGCSQTIIIKDGKPLLGTWQGIFFAEFDGPRRREFYVKIIGDK
>Mature_138_residues
MLVIKMLFKYQIKTNKREELVDITPYIISAISESKVKDGIAVIYVPHTTAGITINENADPSVKHDIINFLSHLIPKNWNF
THLEGNSDAHIKSSLVGCSQTIIIKDGKPLLGTWQGIFFAEFDGPRRREFYVKIIGDK

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family

Homologues:

Organism=Escherichia coli, GI1790491, Length=112, Percent_Identity=37.5, Blast_Score=79, Evalue=2e-16,
Organism=Drosophila melanogaster, GI221476589, Length=102, Percent_Identity=36.2745098039216, Blast_Score=70, Evalue=5e-13,
Organism=Drosophila melanogaster, GI221476594, Length=102, Percent_Identity=36.2745098039216, Blast_Score=69, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1081_METJA (Q58481)

Other databases:

- EMBL:   L77117
- PIR:   H64434
- RefSeq:   NP_248074.1
- ProteinModelPortal:   Q58481
- SMR:   Q58481
- GeneID:   1451977
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1081
- NMPDR:   fig|243232.1.peg.1111
- TIGR:   MJ1081
- HOGENOM:   HBG409904
- OMA:   DYRHAEG
- ProtClustDB:   CLSK2517685
- BioCyc:   MJAN243232:MJ_1081-MONOMER
- InterPro:   IPR001602
- Gene3D:   G3DSA:2.60.120.460
- PIRSF:   PIRSF004681
- TIGRFAMs:   TIGR00149

Pfam domain/function: PF01894 UPF0047; SSF111038 UPF0047

EC number: NA

Molecular weight: Translated: 15613; Mature: 15613

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVIKMLFKYQIKTNKREELVDITPYIISAISESKVKDGIAVIYVPHTTAGITINENADP
CEEEEEEHHHHCCCCCCHHHEEHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCC
SVKHDIINFLSHLIPKNWNFTHLEGNSDAHIKSSLVGCSQTIIIKDGKPLLGTWQGIFFA
HHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHCCCCEEEEEECCCCCEEECCEEEEE
EFDGPRRREFYVKIIGDK
ECCCCCCEEEEEEEECCC
>Mature Secondary Structure
MLVIKMLFKYQIKTNKREELVDITPYIISAISESKVKDGIAVIYVPHTTAGITINENADP
CEEEEEEHHHHCCCCCCHHHEEHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCC
SVKHDIINFLSHLIPKNWNFTHLEGNSDAHIKSSLVGCSQTIIIKDGKPLLGTWQGIFFA
HHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHCCCCEEEEEECCCCCEEECCEEEEE
EFDGPRRREFYVKIIGDK
ECCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087