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The map label for this gene is 15669266

Identifier: 15669266

GI number: 15669266

Start: 1018333

End: 1019037

Strand: Reverse

Name: 15669266

Synonym: MJ1078

Alternate gene names: NA

Gene position: 1019037-1018333 (Counterclockwise)

Preceding gene: 15669267

Following gene: 15669265

Centisome position: 61.2

GC content: 25.53

Gene sequence:

>705_bases
ATGTTTATAAATTCATTAGTTCCTGCTAAGTTAGGGGATGTTTATAGAGGATATCTATTAAAAAAGAAAACAAATGAATC
AATATCTTTAGGAGTTGGAACTGTTTTCATTGAAAGAGTTTTTGATTTAGTAGCTATGATTTCTCTTCTATTTATCTCTG
CCTATTTATCATTTAAATCAGATATTCCAAAGGAAATTCTTTATTCAATAAAATGGGGGGTTATTATAATCTTATTCTTG
ATTATTTTGATTTTTGGTTTTTTAATAGTTAATAGTAAGATAAATTTAAAAAATAAAAAATTAGAGGCAATATTGATGAA
CTTTGAAAAGGGCTTAAAAGCGGTGAAACTAAATACCCTTCCTTTATTAATAACTTTATCATTTACTGGGTGGTTTATTG
AGGGACTAACTGTCTATTTTATATTTCTATCATTAAATCTAAATTTAGAAATCTTATTTGGAGTATTTTCTGATTTAGCA
TCTTCGTTATTAACTGCTATCCCTTTAACACCTTCTGGATTAGGGGTCGTTGAATATGCATTAATTTATATATTAAAACT
AAAAAATATAGATTATAGTGGAGCTTTTGCAGTCCTTATTTTATATCGTTTAATATCATATTTCTCAATTGTTTTGTTTG
GTGCGATAATGTTTTATATCGTTGAAAGAAATATTCTAAAAGAACCTAAAAATGAGAAATATTAA

Upstream 100 bases:

>100_bases
CTAATTAAAAGTTATCGTTGGAAAATCTTTTTAAAAATACCAACATTGATTTAGAATTAAAAGATGCATTTTTAATATAT
TTTTAATATATTATCTTTCA

Downstream 100 bases:

>100_bases
ATTAAACTGTATTTCTAAAAACACAATAAAAAACATAAATACCTAATTATCAATTCAATAAAAACAATAAGAGTGTTATT
GGTGATAAAATGAAACTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MFINSLVPAKLGDVYRGYLLKKKTNESISLGVGTVFIERVFDLVAMISLLFISAYLSFKSDIPKEILYSIKWGVIIILFL
IILIFGFLIVNSKINLKNKKLEAILMNFEKGLKAVKLNTLPLLITLSFTGWFIEGLTVYFIFLSLNLNLEILFGVFSDLA
SSLLTAIPLTPSGLGVVEYALIYILKLKNIDYSGAFAVLILYRLISYFSIVLFGAIMFYIVERNILKEPKNEKY

Sequences:

>Translated_234_residues
MFINSLVPAKLGDVYRGYLLKKKTNESISLGVGTVFIERVFDLVAMISLLFISAYLSFKSDIPKEILYSIKWGVIIILFL
IILIFGFLIVNSKINLKNKKLEAILMNFEKGLKAVKLNTLPLLITLSFTGWFIEGLTVYFIFLSLNLNLEILFGVFSDLA
SSLLTAIPLTPSGLGVVEYALIYILKLKNIDYSGAFAVLILYRLISYFSIVLFGAIMFYIVERNILKEPKNEKY
>Mature_234_residues
MFINSLVPAKLGDVYRGYLLKKKTNESISLGVGTVFIERVFDLVAMISLLFISAYLSFKSDIPKEILYSIKWGVIIILFL
IILIFGFLIVNSKINLKNKKLEAILMNFEKGLKAVKLNTLPLLITLSFTGWFIEGLTVYFIFLSLNLNLEILFGVFSDLA
SSLLTAIPLTPSGLGVVEYALIYILKLKNIDYSGAFAVLILYRLISYFSIVLFGAIMFYIVERNILKEPKNEKY

Specific function: Unknown

COG id: COG0392

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0104 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1078_METJA (Q58478)

Other databases:

- EMBL:   L77117
- PIR:   E64434
- RefSeq:   NP_248071.1
- ProteinModelPortal:   Q58478
- GeneID:   1451974
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1078
- NMPDR:   fig|243232.1.peg.1108
- TIGR:   MJ1078
- HOGENOM:   HBG540424
- OMA:   FRILWAN
- BioCyc:   MJAN243232:MJ_1078-MONOMER
- InterPro:   IPR022791
- InterPro:   IPR005242
- TIGRFAMs:   TIGR00374

Pfam domain/function: PF03706 UPF0104

EC number: NA

Molecular weight: Translated: 26481; Mature: 26481

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe0fcbc4)-; HASH(0xe0900a0)-; HASH(0xe14722c)-; HASH(0xd119838)-; HASH(0xdc1c06c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFINSLVPAKLGDVYRGYLLKKKTNESISLGVGTVFIERVFDLVAMISLLFISAYLSFKS
CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DIPKEILYSIKWGVIIILFLIILIFGFLIVNSKINLKNKKLEAILMNFEKGLKAVKLNTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECCC
PLLITLSFTGWFIEGLTVYFIFLSLNLNLEILFGVFSDLASSLLTAIPLTPSGLGVVEYA
EEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
LIYILKLKNIDYSGAFAVLILYRLISYFSIVLFGAIMFYIVERNILKEPKNEKY
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
>Mature Secondary Structure
MFINSLVPAKLGDVYRGYLLKKKTNESISLGVGTVFIERVFDLVAMISLLFISAYLSFKS
CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DIPKEILYSIKWGVIIILFLIILIFGFLIVNSKINLKNKKLEAILMNFEKGLKAVKLNTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECCC
PLLITLSFTGWFIEGLTVYFIFLSLNLNLEILFGVFSDLASSLLTAIPLTPSGLGVVEYA
EEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
LIYILKLKNIDYSGAFAVLILYRLISYFSIVLFGAIMFYIVERNILKEPKNEKY
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087