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The map label for this gene is rfaB [C]

Identifier: 15669248

GI number: 15669248

Start: 999238

End: 1000458

Strand: Direct

Name: rfaB [C]

Synonym: MJ1059

Alternate gene names: 15669248

Gene position: 999238-1000458 (Clockwise)

Preceding gene: 15669247

Following gene: 15669249

Centisome position: 60.02

GC content: 26.54

Gene sequence:

>1221_bases
ATGTCCAACAAAAAGAAACAATTAACTGTAATGGGGACTGTTTGGGATTTCTGGTCAGTGTTAAAAATGTTTGACAAACT
TTATGAATCAAAATATATTTCATTTTATGAGCCATGGTTAAAGGGCGAAATTGACAAAGAAAAGATAATACTATTTAACG
AAAAATCTAAAAATCCTCTACTTTGGCCGTTTAAAATTTTAAAAAGAACTTATAAGATACTAAAAATTATTAGAGAATTC
AAGCCAGATTTAGTTATAACCCATCATGATGATGCAAATGTTTCAATAATTCCAGTAATATTATTAAATAAAATTTTTAA
AATATCCAACAATACTAAATTTATTTTATGGGTTAGGAACAACCCAATAGAATCATATAAAGAAGGTCTTTATTCTAAAA
TTATTATACTGGCATATAAATATTTTTATAAATATGCAGATATTATAATTGTTCAAACACAGGAAAATAAGAAAATAATA
GAATCTCATTTTAAATCATTAAAAAATAAAACTAAAATTGTTCCGAATGTTTATGAAATTGATAAACTTCAACAACTATC
TAACGAACCATTGGAAAAACAATATCGAAATATCTTTAAAGATTCTTTTGTATTTATAAATATTGGAAGATTAACCGAAC
AAAAAGGACAGTGGTTTTTAATCAGAAGTTTTAAAAGGGTTACTGAAAAATACCCAAACGCTAAACTAATAATTCTTGGA
GATGGGGAGTTAAAAAATAAACTTCAAGAATTAATAAATAAATTAAACTTACAAAATAATGTTTATCTTTTAGGCATGCA
GAAGAATCCATTCAAATTTTTAAAGCATTCGAATTGTTTTGTTTTCTCATCTTTGTGGGAGGGATTACCAAACACTGTTA
TAGAGGCGTTATCGTTAAACCTCCCTGTAATATCAACTGATTGTAAAACTGGTCCAAGGGAAATCTTATGCCCAGAGTTA
AATATAAGTGATAAAATCGATTATCCTTATTATGGAAAGTATGGGATATTAACTAAACCATTTTCAAGAGAGTTTATATG
GCAAGATTTAAATGAAAAACCTTTAATCGAAGAAGAGAAAATGTTAGCTGATTTAATGATTAAGATGATTGAAGATGAAG
ATTTGAGAAAGAGATATTCTAATGGGTTAGAAAGAGCTAAGGATTTTGACATTGAAAAGATAATTAAAGAATGGAAACTA
TTAATTGAGGGAACAATATGA

Upstream 100 bases:

>100_bases
CCTGAGGATGCAATAACTGATTTCATTGATTGTAATATTGACGCAATGTTTATTGAAGGTTATTTAGTAAAGAGAAAAAT
ATAAAAGTTGAGGGATTAGA

Downstream 100 bases:

>100_bases
TTGTAGAAATATATAACTTTAATTTCATTAGAATTAACGAAAAAGAAATAAAATTATTTTATAACACATATCCACCATTA
AAAAAATTAGAGTGTTATCT

Product: capsular polysaccharide biosynthsis protein M

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MSNKKKQLTVMGTVWDFWSVLKMFDKLYESKYISFYEPWLKGEIDKEKIILFNEKSKNPLLWPFKILKRTYKILKIIREF
KPDLVITHHDDANVSIIPVILLNKIFKISNNTKFILWVRNNPIESYKEGLYSKIIILAYKYFYKYADIIIVQTQENKKII
ESHFKSLKNKTKIVPNVYEIDKLQQLSNEPLEKQYRNIFKDSFVFINIGRLTEQKGQWFLIRSFKRVTEKYPNAKLIILG
DGELKNKLQELINKLNLQNNVYLLGMQKNPFKFLKHSNCFVFSSLWEGLPNTVIEALSLNLPVISTDCKTGPREILCPEL
NISDKIDYPYYGKYGILTKPFSREFIWQDLNEKPLIEEEKMLADLMIKMIEDEDLRKRYSNGLERAKDFDIEKIIKEWKL
LIEGTI

Sequences:

>Translated_406_residues
MSNKKKQLTVMGTVWDFWSVLKMFDKLYESKYISFYEPWLKGEIDKEKIILFNEKSKNPLLWPFKILKRTYKILKIIREF
KPDLVITHHDDANVSIIPVILLNKIFKISNNTKFILWVRNNPIESYKEGLYSKIIILAYKYFYKYADIIIVQTQENKKII
ESHFKSLKNKTKIVPNVYEIDKLQQLSNEPLEKQYRNIFKDSFVFINIGRLTEQKGQWFLIRSFKRVTEKYPNAKLIILG
DGELKNKLQELINKLNLQNNVYLLGMQKNPFKFLKHSNCFVFSSLWEGLPNTVIEALSLNLPVISTDCKTGPREILCPEL
NISDKIDYPYYGKYGILTKPFSREFIWQDLNEKPLIEEEKMLADLMIKMIEDEDLRKRYSNGLERAKDFDIEKIIKEWKL
LIEGTI
>Mature_405_residues
SNKKKQLTVMGTVWDFWSVLKMFDKLYESKYISFYEPWLKGEIDKEKIILFNEKSKNPLLWPFKILKRTYKILKIIREFK
PDLVITHHDDANVSIIPVILLNKIFKISNNTKFILWVRNNPIESYKEGLYSKIIILAYKYFYKYADIIIVQTQENKKIIE
SHFKSLKNKTKIVPNVYEIDKLQQLSNEPLEKQYRNIFKDSFVFINIGRLTEQKGQWFLIRSFKRVTEKYPNAKLIILGD
GELKNKLQELINKLNLQNNVYLLGMQKNPFKFLKHSNCFVFSSLWEGLPNTVIEALSLNLPVISTDCKTGPREILCPELN
ISDKIDYPYYGKYGILTKPFSREFIWQDLNEKPLIEEEKMLADLMIKMIEDEDLRKRYSNGLERAKDFDIEKIIKEWKLL
IEGTI

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family

Homologues:

Organism=Escherichia coli, GI226510984, Length=292, Percent_Identity=23.972602739726, Blast_Score=73, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1059_METJA (Q58459)

Other databases:

- EMBL:   L77117
- PIR:   B64432
- RefSeq:   NP_248053.1
- ProteinModelPortal:   Q58459
- GeneID:   1451956
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1059
- NMPDR:   fig|243232.1.peg.1090
- TIGR:   MJ1059
- ProtClustDB:   CLSK2749950
- BioCyc:   MJAN243232:MJ_1059-MONOMER
- InterPro:   IPR001296

Pfam domain/function: PF00534 Glycos_transf_1

EC number: 2.4.1.- [C]

Molecular weight: Translated: 48270; Mature: 48139

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKKKQLTVMGTVWDFWSVLKMFDKLYESKYISFYEPWLKGEIDKEKIILFNEKSKNPL
CCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHCHHHCCCCCCCEEEEEECCCCCCC
LWPFKILKRTYKILKIIREFKPDLVITHHDDANVSIIPVILLNKIFKISNNTKFILWVRN
CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEHHHHHHHHHHCCCCCEEEEEEEC
NPIESYKEGLYSKIIILAYKYFYKYADIIIVQTQENKKIIESHFKSLKNKTKIVPNVYEI
CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHH
DKLQQLSNEPLEKQYRNIFKDSFVFINIGRLTEQKGQWFLIRSFKRVTEKYPNAKLIILG
HHHHHHCCCCHHHHHHHHHCCCEEEEEECCHHCCCCCEEEHHHHHHHHHHCCCCEEEEEE
DGELKNKLQELINKLNLQNNVYLLGMQKNPFKFLKHSNCFVFSSLWEGLPNTVIEALSLN
CCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHCCCCEEEHHHHCCCHHHHHHHHHCC
LPVISTDCKTGPREILCPELNISDKIDYPYYGKYGILTKPFSREFIWQDLNEKPLIEEEK
CCEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHH
MLADLMIKMIEDEDLRKRYSNGLERAKDFDIEKIIKEWKLLIEGTI
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SNKKKQLTVMGTVWDFWSVLKMFDKLYESKYISFYEPWLKGEIDKEKIILFNEKSKNPL
CCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHCHHHCCCCCCCEEEEEECCCCCCC
LWPFKILKRTYKILKIIREFKPDLVITHHDDANVSIIPVILLNKIFKISNNTKFILWVRN
CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEHHHHHHHHHHCCCCCEEEEEEEC
NPIESYKEGLYSKIIILAYKYFYKYADIIIVQTQENKKIIESHFKSLKNKTKIVPNVYEI
CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHH
DKLQQLSNEPLEKQYRNIFKDSFVFINIGRLTEQKGQWFLIRSFKRVTEKYPNAKLIILG
HHHHHHCCCCHHHHHHHHHCCCEEEEEECCHHCCCCCEEEHHHHHHHHHHCCCCEEEEEE
DGELKNKLQELINKLNLQNNVYLLGMQKNPFKFLKHSNCFVFSSLWEGLPNTVIEALSLN
CCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHCCCCEEEHHHHCCCHHHHHHHHHCC
LPVISTDCKTGPREILCPELNISDKIDYPYYGKYGILTKPFSREFIWQDLNEKPLIEEEK
CCEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHH
MLADLMIKMIEDEDLRKRYSNGLERAKDFDIEKIIKEWKLLIEGTI
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087