| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669199
Identifier: 15669199
GI number: 15669199
Start: 939954
End: 941087
Strand: Reverse
Name: 15669199
Synonym: MJ1010
Alternate gene names: NA
Gene position: 941087-939954 (Counterclockwise)
Preceding gene: 15669200
Following gene: 15669198
Centisome position: 56.52
GC content: 26.37
Gene sequence:
>1134_bases TTGATAAATATGAAATTCTTTAATAGGGTGGAAGAAATAAAAGAAATTTTATCAATTTTAGAAGAAGAACCAAATTTAAT TTATTTTATTTATGGCCCCATAAACTCTGGAAAAACAGCCCTAATTAATGAAATTATCAACAATAGACTGGATAAAAACA AATATGTTGTGTTTTATATCGATTTGAGAGAGATTTTTATCTCTAAGTATGATGAGTTCGAAGCGAAGCTTCGAGCAACG AAAACCTTCGGTTTTCGTCTAATTATAGAAGTCTTGTTTGAAGAGTATGAGGATGATAAAAAGCCTATTGAAATTATAAG GAGTTTGATAAAGGATGCTCCTTCTTTATGTGGTATTCCAACACCAAAAAATACATTGGAAGAAATTCTAAAAAAGAAAA CAACCAAGAATGTATTTAAGTATATAACTAACATTTTAATGGATATTAAAAGAGAAGGAAAACAGCCAATAATTATTATA GATGAATTGCAAAAAATAGGAGATATGAAAATTAACGGATTCTTAATTTATGAGTTGTTTAATTATTTTGTATCATTAAC TAAGCATAAGCATCTATGTCATGTTTTTTGTTTAAGTTCTGATAGTTTATTCATAGAGAGGGTTTATAACGAGGCAATGT TAAAGGAGAGGGTTGATTACATTTTAGTTGATGACTTTGATAAAGAGACAGCTTTAAAGTTTATAGATTTTCTATCAGAG GAAATTCTAAATAAAAAATTATCCGATGAGGATAAAGAGCTAATTTATTCTTATGTTGGGGGAAAGCCAATTCTAATTAT AAATGTTATAGGTAAATTAAAACATAAAAATCTAAAAGATGTTTTAAATATCTTGTTAATGGATGAAATCTCTAAATTAA AGGACTTTTTAAGTAATTTGGATTATATAAAACCAAAAGTTAATATTGAGGAGGAGATTATCGAAATTAGAAAAGAGGAC ATAATTAATGCGTTAAAATTGTTTAAGGGAAAGTATGAAATTGAAGTTGATAAAATACCAAAAGCAGTTTATGTTTATTT AGTTAAAAAAAACATTTTATTTTTATATCCTCAAAGAGGAACTTTAAAGCCACAATCATTTTTAGTATGGAATGCCATAA AAAGAGTGTTATAA
Upstream 100 bases:
>100_bases TTAGAAAGATGCGAAAATTCTGCAAATGACTTTAGAAAAGAGATATACTTTTTAATTACTGGCAAAAAAATGATATGAAA TATATAGTAAATTTGAGGAG
Downstream 100 bases:
>100_bases CTATACTTTATTTTACTTTTATATTGCCAAAAAATTATATGGAGGGAAATTATGCCAAAAAAGTTTGAAGAAATACTTAA AGAAGTTGAAAACGATTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MINMKFFNRVEEIKEILSILEEEPNLIYFIYGPINSGKTALINEIINNRLDKNKYVVFYIDLREIFISKYDEFEAKLRAT KTFGFRLIIEVLFEEYEDDKKPIEIIRSLIKDAPSLCGIPTPKNTLEEILKKKTTKNVFKYITNILMDIKREGKQPIIII DELQKIGDMKINGFLIYELFNYFVSLTKHKHLCHVFCLSSDSLFIERVYNEAMLKERVDYILVDDFDKETALKFIDFLSE EILNKKLSDEDKELIYSYVGGKPILIINVIGKLKHKNLKDVLNILLMDEISKLKDFLSNLDYIKPKVNIEEEIIEIRKED IINALKLFKGKYEIEVDKIPKAVYVYLVKKNILFLYPQRGTLKPQSFLVWNAIKRVL
Sequences:
>Translated_377_residues MINMKFFNRVEEIKEILSILEEEPNLIYFIYGPINSGKTALINEIINNRLDKNKYVVFYIDLREIFISKYDEFEAKLRAT KTFGFRLIIEVLFEEYEDDKKPIEIIRSLIKDAPSLCGIPTPKNTLEEILKKKTTKNVFKYITNILMDIKREGKQPIIII DELQKIGDMKINGFLIYELFNYFVSLTKHKHLCHVFCLSSDSLFIERVYNEAMLKERVDYILVDDFDKETALKFIDFLSE EILNKKLSDEDKELIYSYVGGKPILIINVIGKLKHKNLKDVLNILLMDEISKLKDFLSNLDYIKPKVNIEEEIIEIRKED IINALKLFKGKYEIEVDKIPKAVYVYLVKKNILFLYPQRGTLKPQSFLVWNAIKRVL >Mature_377_residues MINMKFFNRVEEIKEILSILEEEPNLIYFIYGPINSGKTALINEIINNRLDKNKYVVFYIDLREIFISKYDEFEAKLRAT KTFGFRLIIEVLFEEYEDDKKPIEIIRSLIKDAPSLCGIPTPKNTLEEILKKKTTKNVFKYITNILMDIKREGKQPIIII DELQKIGDMKINGFLIYELFNYFVSLTKHKHLCHVFCLSSDSLFIERVYNEAMLKERVDYILVDDFDKETALKFIDFLSE EILNKKLSDEDKELIYSYVGGKPILIINVIGKLKHKNLKDVLNILLMDEISKLKDFLSNLDYIKPKVNIEEEIIEIRKED IINALKLFKGKYEIEVDKIPKAVYVYLVKKNILFLYPQRGTLKPQSFLVWNAIKRVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the archaeal ATPase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1010_METJA (Q58416)
Other databases:
- EMBL: L77117 - PIR: A64426 - RefSeq: NP_248004.1 - PDB: 3BJO - PDBsum: 3BJO - ProteinModelPortal: Q58416 - SMR: Q58416 - GeneID: 1451907 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1010 - NMPDR: fig|243232.1.peg.1041 - TIGR: MJ1010 - HOGENOM: HBG538932 - OMA: MERIYSE - ProtClustDB: CLSK539704 - BioCyc: MJAN243232:MJ_1010-MONOMER - InterPro: IPR003593 - InterPro: IPR011579 - InterPro: IPR011991 - Gene3D: G3DSA:1.10.10.10 - SMART: SM00382
Pfam domain/function: PF01637 Arch_ATPase
EC number: NA
Molecular weight: Translated: 44464; Mature: 44464
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINMKFFNRVEEIKEILSILEEEPNLIYFIYGPINSGKTALINEIINNRLDKNKYVVFYI CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEE DLREIFISKYDEFEAKLRATKTFGFRLIIEVLFEEYEDDKKPIEIIRSLIKDAPSLCGIP EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHCCCC TPKNTLEEILKKKTTKNVFKYITNILMDIKREGKQPIIIIDELQKIGDMKINGFLIYELF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCHHHHHHHH NYFVSLTKHKHLCHVFCLSSDSLFIERVYNEAMLKERVDYILVDDFDKETALKFIDFLSE HHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHH EILNKKLSDEDKELIYSYVGGKPILIINVIGKLKHKNLKDVLNILLMDEISKLKDFLSNL HHHHHHCCCHHHHHHHHHHCCCCEEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC DYIKPKVNIEEEIIEIRKEDIINALKLFKGKYEIEVDKIPKAVYVYLVKKNILFLYPQRG HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCHHHHHEEEECCEEEEECCCC TLKPQSFLVWNAIKRVL CCCCHHHHHHHHHHHHC >Mature Secondary Structure MINMKFFNRVEEIKEILSILEEEPNLIYFIYGPINSGKTALINEIINNRLDKNKYVVFYI CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEE DLREIFISKYDEFEAKLRATKTFGFRLIIEVLFEEYEDDKKPIEIIRSLIKDAPSLCGIP EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHCCCC TPKNTLEEILKKKTTKNVFKYITNILMDIKREGKQPIIIIDELQKIGDMKINGFLIYELF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCHHHHHHHH NYFVSLTKHKHLCHVFCLSSDSLFIERVYNEAMLKERVDYILVDDFDKETALKFIDFLSE HHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHH EILNKKLSDEDKELIYSYVGGKPILIINVIGKLKHKNLKDVLNILLMDEISKLKDFLSNL HHHHHHCCCHHHHHHHHHHCCCCEEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC DYIKPKVNIEEEIIEIRKEDIINALKLFKGKYEIEVDKIPKAVYVYLVKKNILFLYPQRG HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCHHHHHEEEECCEEEEECCCC TLKPQSFLVWNAIKRVL CCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087; 9045616