| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669195
Identifier: 15669195
GI number: 15669195
Start: 934360
End: 935439
Strand: Direct
Name: 15669195
Synonym: MJ1006
Alternate gene names: NA
Gene position: 934360-935439 (Clockwise)
Preceding gene: 15669194
Following gene: 15669196
Centisome position: 56.12
GC content: 25.93
Gene sequence:
>1080_bases TTGGCTATCCAGAATGGTTTAAGAAATAGGATTCTTTTTTTGGTGATTTTTATGAAATTTTATAATCGAGAGAAAGAATT AAATTATCTAAAAAATTATGTCCAATTAGAGCCTAACTCTATACTTTTTGTTTATGGTCCTAAATCTTCTGGTAAATCTA CGGTAATGCTTAGGGTTATTGAAGAATTATCTAAAAAAGATGATTTGGTGTTTTTTTATTATGATTTGAGAGAATATGCT ACACCAACAAAGGAAGAGTTTTTGGAAATATTTTTTGAAAAAGGAGATAAAAAGTATCTTCTAAATAGATTTGAAATTAA CTTAAAAATATTTAAGTTTGGTATTGAAGAGAAATTTGATTTCGATAATATAAAGTTAAATGATGTCTTTAGCAAGATGA AAGAGAGTATTAATGCAGTTATTAAAGATGGAAAGAAACCAATTTTAATAATAGATGAATTGCAGAAGTTAAAGAGTATA TACTTCAATGGAGAGGGTAAGGGAGATAAATCTTTGTTGAATGAATTGTTTAATTTATTTGTGCATTTAACTAAAGTAAG ACATCTATGTCATGTTATTTGTTTAACTTCTGATACTTTATTTATAGAGGAAATCTATAGAAACTCTACTTTAGAAAATA CCTCTGAATATTATTTAATTGATTGGTTAAGAAAAGAAAGTATTAGAAATATCTTAAAAGAAGAGGGTTTTAGTGAGGAG GAGGTTGATTACTGCTTAAAATATTTATCTCTACCTTATGAAATTTCTCAATTAATAAACAATAAAAAACTTGGCTTATC TGTTGAACAAACTATAAAGCAGTGGATTAATATTGAGAGGGACAAAATCTTATATTTAATTTCTACTCAAAAGGAGTTTG AGATGGGAAAATTAATTGATGCCTTAAAATTATTTGAGAACAAAATAAAAGTTGATATTAAAGAGATTATAAGAGATAAT CTTATGGATGAAGTTAAATTTTTAATTAAAAATGAGATACTGTTTTATGATGTGATGAACGGTATAATCAAGCCAACCTC TGTAAAGAAGTGGTATGCCATAAAAGAAGTTATAGAATGA
Upstream 100 bases:
>100_bases AGGAAGAGCAGAGTAGCAGTGCATAACAGAATAAAGGATTTAAAAACTCTTGGCTTTAAAATAGAGAGTAAGTCTGGGCC ATTTGGTGGGTATAAGATAG
Downstream 100 bases:
>100_bases GATTTATAAATTTACAAATATGTATTAGAGAGTTATTTATTTAAACCTCAACTATTTTTATTAAATTAAAAACTCTTCAA AAGATTTGACGGTGATTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MAIQNGLRNRILFLVIFMKFYNREKELNYLKNYVQLEPNSILFVYGPKSSGKSTVMLRVIEELSKKDDLVFFYYDLREYA TPTKEEFLEIFFEKGDKKYLLNRFEINLKIFKFGIEEKFDFDNIKLNDVFSKMKESINAVIKDGKKPILIIDELQKLKSI YFNGEGKGDKSLLNELFNLFVHLTKVRHLCHVICLTSDTLFIEEIYRNSTLENTSEYYLIDWLRKESIRNILKEEGFSEE EVDYCLKYLSLPYEISQLINNKKLGLSVEQTIKQWINIERDKILYLISTQKEFEMGKLIDALKLFENKIKVDIKEIIRDN LMDEVKFLIKNEILFYDVMNGIIKPTSVKKWYAIKEVIE
Sequences:
>Translated_359_residues MAIQNGLRNRILFLVIFMKFYNREKELNYLKNYVQLEPNSILFVYGPKSSGKSTVMLRVIEELSKKDDLVFFYYDLREYA TPTKEEFLEIFFEKGDKKYLLNRFEINLKIFKFGIEEKFDFDNIKLNDVFSKMKESINAVIKDGKKPILIIDELQKLKSI YFNGEGKGDKSLLNELFNLFVHLTKVRHLCHVICLTSDTLFIEEIYRNSTLENTSEYYLIDWLRKESIRNILKEEGFSEE EVDYCLKYLSLPYEISQLINNKKLGLSVEQTIKQWINIERDKILYLISTQKEFEMGKLIDALKLFENKIKVDIKEIIRDN LMDEVKFLIKNEILFYDVMNGIIKPTSVKKWYAIKEVIE >Mature_358_residues AIQNGLRNRILFLVIFMKFYNREKELNYLKNYVQLEPNSILFVYGPKSSGKSTVMLRVIEELSKKDDLVFFYYDLREYAT PTKEEFLEIFFEKGDKKYLLNRFEINLKIFKFGIEEKFDFDNIKLNDVFSKMKESINAVIKDGKKPILIIDELQKLKSIY FNGEGKGDKSLLNELFNLFVHLTKVRHLCHVICLTSDTLFIEEIYRNSTLENTSEYYLIDWLRKESIRNILKEEGFSEEE VDYCLKYLSLPYEISQLINNKKLGLSVEQTIKQWINIERDKILYLISTQKEFEMGKLIDALKLFENKIKVDIKEIIRDNL MDEVKFLIKNEILFYDVMNGIIKPTSVKKWYAIKEVIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the archaeal ATPase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1006_METJA (Q58412)
Other databases:
- EMBL: L77117 - PIR: E64425 - RefSeq: NP_248000.1 - ProteinModelPortal: Q58412 - SMR: Q58412 - GeneID: 1451903 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1006 - NMPDR: fig|243232.1.peg.1037 - TIGR: MJ1006 - HOGENOM: HBG538932 - OMA: TVMLRVI - ProtClustDB: CLSK539704 - BioCyc: MJAN243232:MJ_1006-MONOMER - InterPro: IPR003593 - InterPro: IPR011579 - InterPro: IPR011991 - Gene3D: G3DSA:1.10.10.10 - SMART: SM00382
Pfam domain/function: PF01637 Arch_ATPase
EC number: NA
Molecular weight: Translated: 42778; Mature: 42646
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIQNGLRNRILFLVIFMKFYNREKELNYLKNYVQLEPNSILFVYGPKSSGKSTVMLRVI CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCCEEEEECCCCCCCHHHHHHHH EELSKKDDLVFFYYDLREYATPTKEEFLEIFFEKGDKKYLLNRFEINLKIFKFGIEEKFD HHHCCCCCEEEEEEEHHHHCCCCHHHHHHHHHHCCCHHHHHHHHEEEEEEEEECCCCCCC FDNIKLNDVFSKMKESINAVIKDGKKPILIIDELQKLKSIYFNGEGKGDKSLLNELFNLF CCCEEHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHEECCCCCCHHHHHHHHHHHH VHLTKVRHLCHVICLTSDTLFIEEIYRNSTLENTSEYYLIDWLRKESIRNILKEEGFSEE HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH EVDYCLKYLSLPYEISQLINNKKLGLSVEQTIKQWINIERDKILYLISTQKEFEMGKLID HHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHH ALKLFENKIKVDIKEIIRDNLMDEVKFLIKNEILFYDVMNGIIKPTSVKKWYAIKEVIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC >Mature Secondary Structure AIQNGLRNRILFLVIFMKFYNREKELNYLKNYVQLEPNSILFVYGPKSSGKSTVMLRVI CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCCEEEEECCCCCCCHHHHHHHH EELSKKDDLVFFYYDLREYATPTKEEFLEIFFEKGDKKYLLNRFEINLKIFKFGIEEKFD HHHCCCCCEEEEEEEHHHHCCCCHHHHHHHHHHCCCHHHHHHHHEEEEEEEEECCCCCCC FDNIKLNDVFSKMKESINAVIKDGKKPILIIDELQKLKSIYFNGEGKGDKSLLNELFNLF CCCEEHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHEECCCCCCHHHHHHHHHHHH VHLTKVRHLCHVICLTSDTLFIEEIYRNSTLENTSEYYLIDWLRKESIRNILKEEGFSEE HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH EVDYCLKYLSLPYEISQLINNKKLGLSVEQTIKQWINIERDKILYLISTQKEFEMGKLID HHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHH ALKLFENKIKVDIKEIIRDNLMDEVKFLIKNEILFYDVMNGIIKPTSVKKWYAIKEVIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087; 9045616