Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is ychN [C]

Identifier: 15669179

GI number: 15669179

Start: 919346

End: 919690

Strand: Reverse

Name: ychN [C]

Synonym: MJ0989

Alternate gene names: 15669179

Gene position: 919690-919346 (Counterclockwise)

Preceding gene: 15669180

Following gene: 15669176

Centisome position: 55.24

GC content: 36.81

Gene sequence:

>345_bases
ATGAAATTCACCGTAATCATTACAGAAGCTCCTTATGGAAAGGAGAGGGCTTACTCTGCCTTAAGATTTGCATTAACAGC
TTTATTAGAAGGGATTGAAGTAAATATCTTCTTACTTGAGAATGGTGTCTATGTTGCTAAAAAGGAACAAAACCCTTCAG
AAGTTCCAAACTACTTAGAGCTATTAAAGAATGCCATTGAGTTGGGAGCAGTTGTTAAAGTTTGCGGTCCTTGCTGTAAG
GCAAGAGGTTTAAAAGAGGAGGATTTAATTGAAGGAGCTAAGTTAGCTACAATGCACGACTTAATCGCCTTTGTTAAAGA
GAGTGATAATGTTGTTACATTCTAA

Upstream 100 bases:

>100_bases
AAAACATAAAAAGATTTGCTGAAAATAACGGCTATACAGTTGTTTTAGCTGAAGAAACAGAGAGTAGATTTAGAATAGTC
ATCAAAAAATAGGTGAAATA

Downstream 100 bases:

>100_bases
TTTTGTTTTGCTTTTTTATATTCCTCAACAAACCTCTTATAGCAGAGGTTTAATACCTCTTTTATAACCTTCTCTTTGCT
CTTACTCTTATCATAAGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MKFTVIITEAPYGKERAYSALRFALTALLEGIEVNIFLLENGVYVAKKEQNPSEVPNYLELLKNAIELGAVVKVCGPCCK
ARGLKEEDLIEGAKLATMHDLIAFVKESDNVVTF

Sequences:

>Translated_114_residues
MKFTVIITEAPYGKERAYSALRFALTALLEGIEVNIFLLENGVYVAKKEQNPSEVPNYLELLKNAIELGAVVKVCGPCCK
ARGLKEEDLIEGAKLATMHDLIAFVKESDNVVTF
>Mature_114_residues
MKFTVIITEAPYGKERAYSALRFALTALLEGIEVNIFLLENGVYVAKKEQNPSEVPNYLELLKNAIELGAVVKVCGPCCK
ARGLKEEDLIEGAKLATMHDLIAFVKESDNVVTF

Specific function: Unknown

COG id: COG1553

COG function: function code P; Uncharacterized conserved protein involved in intracellular sulfur reduction

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.kandleri MK0008

Homologues:

Organism=Escherichia coli, GI1787471, Length=116, Percent_Identity=30.1724137931034, Blast_Score=64, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y989_METJA (Q58396)

Other databases:

- EMBL:   L77117
- PIR:   E64423
- RefSeq:   NP_247984.1
- ProteinModelPortal:   Q58396
- SMR:   Q58396
- GeneID:   1451887
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0989
- NMPDR:   fig|243232.1.peg.1021
- TIGR:   MJ0989
- HOGENOM:   HBG538485
- OMA:   NDAPYGS
- ProtClustDB:   CLSK876414
- BioCyc:   MJAN243232:MJ_0989-MONOMER
- InterPro:   IPR003787

Pfam domain/function: PF02635 DrsE

EC number: NA

Molecular weight: Translated: 12577; Mature: 12577

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFTVIITEAPYGKERAYSALRFALTALLEGIEVNIFLLENGVYVAKKEQNPSEVPNYLE
CEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEEEECCCCCCCHHHHHH
LLKNAIELGAVVKVCGPCCKARGLKEEDLIEGAKLATMHDLIAFVKESDNVVTF
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCCEECC
>Mature Secondary Structure
MKFTVIITEAPYGKERAYSALRFALTALLEGIEVNIFLLENGVYVAKKEQNPSEVPNYLE
CEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEEEECCCCCCCHHHHHH
LLKNAIELGAVVKVCGPCCKARGLKEEDLIEGAKLATMHDLIAFVKESDNVVTF
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087