| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669161
Identifier: 15669161
GI number: 15669161
Start: 904749
End: 905846
Strand: Direct
Name: 15669161
Synonym: MJ0971
Alternate gene names: NA
Gene position: 904749-905846 (Clockwise)
Preceding gene: 15669158
Following gene: 15669162
Centisome position: 54.34
GC content: 28.42
Gene sequence:
>1098_bases TTGAACATGGATACATCTAAAGTTATATTAATTGTAGCTATAATTATCTGGATAATTTTATATAGTATCAGAGATTCAAT AAATTTAAAGACTTATGGAGGAATTTTTGGAATTTTAAGGACTAAATTGGGATTAAAAACAATTGAAAAATTAGGAAAAT ATAAAATTTGGCAAAAAATAGGAATTATATCAATACCAATATGTGTAATACTTGGATTTTTTATGCTTCTTAATATCATA GATATGAGTATAAGGCTGTTGTCTGGAACTCTGCCAAAAGAAGCAGCAAAGCCAGTAGTATTTTTATTTGGAGATGTTAT TCCATGGATTCCAGGGATTATAGCTCTATTAATAGCAATTTCTGTGCATGAATTAGCACATGGTATATTTGCCAAATCTT TTGGAATTAAAGTTAAGAGTTCAGGAATTTTATTATTATTAGGATTACCATTGGGGGCTTTTGTTGAATTAGGAGATGAA TTTAAAACAGCTGATAAAAAGATTAGAGGAGCTATAGCCTCAGCAGGTCCATTAGCAAATTTAATAATATTTTTAACATC AATTCCATTACTTTCATTTAGCTATACACTACCAACAGAATTAAAAATTATTGATGTTAAAGAACCAGCATCAGAGTTTT TACAAAAAGGAGATATTATTTACGAAATTAACGGCAAAAAAATAAATTCATTAGAGGACTTTAAAGAATTTGCCAAAACT ATAGAACCAAAAAAAGAGTATGAGATAAAAATTTTGAGGGATAATAAAATACTGACGTATAAAATTGTTAGTTCTAATGA AGGAAAACTTGGAATTATGGTTTCTCCAACAAAAAACACGGCATTATTTATAAACACTATCTATTGGACTTACTGGTTTA ACTTTTTATTAGCTTTATTTAACCTACTCCCAGCTATGCCTTTGGATGGTTTTCACGTATGGAATGCTTTCCCAGAATTA TTAAAAGAGAGAAAAAATAGATTCATTTCTAAAGTAGGTCAAATACTGGAATTATTTATAAATGAAAAAACTTTAGGATC AATAACACTATTAGTTTGGTGGGTTATTCTGGGGAGCATTTTATATTCAATGTGGTGA
Upstream 100 bases:
>100_bases GTTGTAAGATTCATACCAACTATTATATATACTCTTCGTTTTTATTAGATTTAAAGTTATAGGTAATTGAAAATAAAAAA TATTAAAAATATTTGGAGGA
Downstream 100 bases:
>100_bases AATATATGGATATTCTTAACTTCTACATCTATGGATTTGTTTCTCTTTTTATTACAATAGACCCAATTGGCTTAATTCCA ATAGTGCATTCTCTAACCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MNMDTSKVILIVAIIIWIILYSIRDSINLKTYGGIFGILRTKLGLKTIEKLGKYKIWQKIGIISIPICVILGFFMLLNII DMSIRLLSGTLPKEAAKPVVFLFGDVIPWIPGIIALLIAISVHELAHGIFAKSFGIKVKSSGILLLLGLPLGAFVELGDE FKTADKKIRGAIASAGPLANLIIFLTSIPLLSFSYTLPTELKIIDVKEPASEFLQKGDIIYEINGKKINSLEDFKEFAKT IEPKKEYEIKILRDNKILTYKIVSSNEGKLGIMVSPTKNTALFINTIYWTYWFNFLLALFNLLPAMPLDGFHVWNAFPEL LKERKNRFISKVGQILELFINEKTLGSITLLVWWVILGSILYSMW
Sequences:
>Translated_365_residues MNMDTSKVILIVAIIIWIILYSIRDSINLKTYGGIFGILRTKLGLKTIEKLGKYKIWQKIGIISIPICVILGFFMLLNII DMSIRLLSGTLPKEAAKPVVFLFGDVIPWIPGIIALLIAISVHELAHGIFAKSFGIKVKSSGILLLLGLPLGAFVELGDE FKTADKKIRGAIASAGPLANLIIFLTSIPLLSFSYTLPTELKIIDVKEPASEFLQKGDIIYEINGKKINSLEDFKEFAKT IEPKKEYEIKILRDNKILTYKIVSSNEGKLGIMVSPTKNTALFINTIYWTYWFNFLLALFNLLPAMPLDGFHVWNAFPEL LKERKNRFISKVGQILELFINEKTLGSITLLVWWVILGSILYSMW >Mature_365_residues MNMDTSKVILIVAIIIWIILYSIRDSINLKTYGGIFGILRTKLGLKTIEKLGKYKIWQKIGIISIPICVILGFFMLLNII DMSIRLLSGTLPKEAAKPVVFLFGDVIPWIPGIIALLIAISVHELAHGIFAKSFGIKVKSSGILLLLGLPLGAFVELGDE FKTADKKIRGAIASAGPLANLIIFLTSIPLLSFSYTLPTELKIIDVKEPASEFLQKGDIIYEINGKKINSLEDFKEFAKT IEPKKEYEIKILRDNKILTYKIVSSNEGKLGIMVSPTKNTALFINTIYWTYWFNFLLALFNLLPAMPLDGFHVWNAFPEL LKERKNRFISKVGQILELFINEKTLGSITLLVWWVILGSILYSMW
Specific function: Unknown
COG id: COG0750
COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To S.solfataricus C04034
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y971_METJA (Q58381)
Other databases:
- EMBL: L77117 - PIR: C64421 - RefSeq: NP_247966.1 - ProteinModelPortal: Q58381 - GeneID: 1451869 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0971 - NMPDR: fig|243232.1.peg.1003 - TIGR: MJ0971 - HOGENOM: HBG538926 - OMA: IPWIPGI - ProtClustDB: CLSK876409 - BioCyc: MJAN243232:MJ_0971-MONOMER - GO: GO:0006508 - InterPro: IPR001478 - InterPro: IPR001193 - InterPro: IPR008915 - PRINTS: PR01000 - SMART: SM00228
Pfam domain/function: PF02163 Peptidase_M50; SSF50156 PDZ
EC number: NA
Molecular weight: Translated: 41083; Mature: 41083
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xdd54470)-; HASH(0xd79f42c)-; HASH(0x406d371c)-; HASH(0xd929934)-; HASH(0xdcd3968)-; HASH(0xb5305c0)-;
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMDTSKVILIVAIIIWIILYSIRDSINLKTYGGIFGILRTKLGLKTIEKLGKYKIWQKI CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GIISIPICVILGFFMLLNIIDMSIRLLSGTLPKEAAKPVVFLFGDVIPWIPGIIALLIAI CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEHHHHHHHHHHHHHHHHHH SVHELAHGIFAKSFGIKVKSSGILLLLGLPLGAFVELGDEFKTADKKIRGAIASAGPLAN HHHHHHHHHHHHHCCCEEECCCEEEEECCCHHHHHHHCHHHHHHHHHHHHHHHCCCHHHH LIIFLTSIPLLSFSYTLPTELKIIDVKEPASEFLQKGDIIYEINGKKINSLEDFKEFAKT HHHHHHHHHHHHEEECCCCCEEEEECCCHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHH IEPKKEYEIKILRDNKILTYKIVSSNEGKLGIMVSPTKNTALFINTIYWTYWFNFLLALF CCCCCCCEEEEEECCEEEEEEEEECCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHH NLLPAMPLDGFHVWNAFPELLKERKNRFISKVGQILELFINEKTLGSITLLVWWVILGSI HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LYSMW HHHCH >Mature Secondary Structure MNMDTSKVILIVAIIIWIILYSIRDSINLKTYGGIFGILRTKLGLKTIEKLGKYKIWQKI CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GIISIPICVILGFFMLLNIIDMSIRLLSGTLPKEAAKPVVFLFGDVIPWIPGIIALLIAI CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEHHHHHHHHHHHHHHHHHH SVHELAHGIFAKSFGIKVKSSGILLLLGLPLGAFVELGDEFKTADKKIRGAIASAGPLAN HHHHHHHHHHHHHCCCEEECCCEEEEECCCHHHHHHHCHHHHHHHHHHHHHHHCCCHHHH LIIFLTSIPLLSFSYTLPTELKIIDVKEPASEFLQKGDIIYEINGKKINSLEDFKEFAKT HHHHHHHHHHHHEEECCCCCEEEEECCCHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHH IEPKKEYEIKILRDNKILTYKIVSSNEGKLGIMVSPTKNTALFINTIYWTYWFNFLLALF CCCCCCCEEEEEECCEEEEEEEEECCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHH NLLPAMPLDGFHVWNAFPELLKERKNRFISKVGQILELFINEKTLGSITLLVWWVILGSI HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LYSMW HHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087