Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15669156

Identifier: 15669156

GI number: 15669156

Start: 899865

End: 901199

Strand: Direct

Name: 15669156

Synonym: MJ0966

Alternate gene names: NA

Gene position: 899865-901199 (Clockwise)

Preceding gene: 15669155

Following gene: 15669158

Centisome position: 54.05

GC content: 30.94

Gene sequence:

>1335_bases
GTGATTAAAATGATAAAGAATGTTGCTATAATCTACCCAAACAAATTTAAAGCTGGGATTTCTTGCTTAGCTGTGCATGT
TCTAGCTAATCATTTAAGCAAATATAGAGATTTAAATGTAGGAGTGTATTTCTTAGAGAATTATGATAGAATAAAAAATT
TTGATGCAATTTTTATTACTCTACAGTATGAAAACGATTACTTTAATGCAATAAAGATAATTAAAGATTTGAGAAAAAAT
AACCCAAATGCTATTTTTGTTGCTGGAGGGCCTTGTGTAATGGAAAATTTTTTCCCAATAGCTGAGTTTTTTGATGTATT
TATCGTTGGAGAGATTGAGGGCAGTGATGTAATGCTAAAAGTTATAAATAGAGAGTTTGATGTTGAGGGTGTTTATTCAA
AATATTTAGAGAAGGATAAAGTTAAAAGAATCTATCCAAAAAAATTAACTATAGATGATTATCCAATATATCAGCCAACC
TCTGAAGAGGGAGCTTATGGAAAATCCTTCTTATTAGAGATTGGTAGAGGATGTCCAAGAAGATGTAGATTTTGCTTAGC
GAGAGCTATCTATTATCCACCAAGGTTTAGAAAGCTTGATGATTTAATGTATTTAGCAGAAGAAGGAGTTAAGGTTAATA
AAGTCAATAAAGTTGCTTTAATAGCCCCATCAGTTGGAGATTACAAGTATATAGTTGAGTTATGCAACTTTTTGGATGAT
ATGGGAGTTCATATATCTCCTTCATCTTTAAGGGCAGATACATTAAACGATGATTTGATGAGAATTTTAAAGCCTAAAAC
TTTAACCATAGCTCCAGAAGCTGGAAGTGAAAGGTTAAGAGAGTTTATAAAAAAGGACATTAGAGAGAGGGACATAGCTA
ATGCCATTGATTTAGCTAAAAAATTTGGAGTTGAAAAGGTTAAGCTCTATTTTATGGTTGGCATTCCGACAGAGACTGAT
GAAGATATTGAAGAACTTATAAATTTAACGAAGAAAGTAAAGAAAGAAATTAGAAAAGTAGAAATCTCAGTCAATCCAAT
GATTCCAAAGCCACATACAGATTTTGAGGTAGAAGAGTTTGATTTATCATCTAAGAAAAAAATTAAGTATATTGAGAAGG
CATTAAAAAAAGAAGGTATTAGGGTAGAATATGAGAACTTCAACTCCATGATTTGCCAGTGTATATTGGCAAGGGGGGAT
GAAAATCTTAGCAAATATTTAGATTACTCAAAAAATCCAACAAGCTTAATTAGTGCTTTAAAGAAAGATAGATTGTTGGA
TAAATACTTAGGAAGGTTTGAAGATAAAGGTGTTTGGAAAAATATTATTCTCTAA

Upstream 100 bases:

>100_bases
GATATTGTTGAAAAGGCTAAAAAAGAAAATGCAAGACCTCCAGGAGTTATAGTTGTTGGTGAGGTTGTTAATGTGTTAGA
TAGTCAATAAATTAATTTTT

Downstream 100 bases:

>100_bases
AAATTTCAAATTTGTATATTTCCATAAGATTATGAGATTAGAAACTATCACTTTTTTAAGTTAAAACTTTAAAAAATAAG
AATCATCTAAATTTTAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MIKMIKNVAIIYPNKFKAGISCLAVHVLANHLSKYRDLNVGVYFLENYDRIKNFDAIFITLQYENDYFNAIKIIKDLRKN
NPNAIFVAGGPCVMENFFPIAEFFDVFIVGEIEGSDVMLKVINREFDVEGVYSKYLEKDKVKRIYPKKLTIDDYPIYQPT
SEEGAYGKSFLLEIGRGCPRRCRFCLARAIYYPPRFRKLDDLMYLAEEGVKVNKVNKVALIAPSVGDYKYIVELCNFLDD
MGVHISPSSLRADTLNDDLMRILKPKTLTIAPEAGSERLREFIKKDIRERDIANAIDLAKKFGVEKVKLYFMVGIPTETD
EDIEELINLTKKVKKEIRKVEISVNPMIPKPHTDFEVEEFDLSSKKKIKYIEKALKKEGIRVEYENFNSMICQCILARGD
ENLSKYLDYSKNPTSLISALKKDRLLDKYLGRFEDKGVWKNIIL

Sequences:

>Translated_444_residues
MIKMIKNVAIIYPNKFKAGISCLAVHVLANHLSKYRDLNVGVYFLENYDRIKNFDAIFITLQYENDYFNAIKIIKDLRKN
NPNAIFVAGGPCVMENFFPIAEFFDVFIVGEIEGSDVMLKVINREFDVEGVYSKYLEKDKVKRIYPKKLTIDDYPIYQPT
SEEGAYGKSFLLEIGRGCPRRCRFCLARAIYYPPRFRKLDDLMYLAEEGVKVNKVNKVALIAPSVGDYKYIVELCNFLDD
MGVHISPSSLRADTLNDDLMRILKPKTLTIAPEAGSERLREFIKKDIRERDIANAIDLAKKFGVEKVKLYFMVGIPTETD
EDIEELINLTKKVKKEIRKVEISVNPMIPKPHTDFEVEEFDLSSKKKIKYIEKALKKEGIRVEYENFNSMICQCILARGD
ENLSKYLDYSKNPTSLISALKKDRLLDKYLGRFEDKGVWKNIIL
>Mature_444_residues
MIKMIKNVAIIYPNKFKAGISCLAVHVLANHLSKYRDLNVGVYFLENYDRIKNFDAIFITLQYENDYFNAIKIIKDLRKN
NPNAIFVAGGPCVMENFFPIAEFFDVFIVGEIEGSDVMLKVINREFDVEGVYSKYLEKDKVKRIYPKKLTIDDYPIYQPT
SEEGAYGKSFLLEIGRGCPRRCRFCLARAIYYPPRFRKLDDLMYLAEEGVKVNKVNKVALIAPSVGDYKYIVELCNFLDD
MGVHISPSSLRADTLNDDLMRILKPKTLTIAPEAGSERLREFIKKDIRERDIANAIDLAKKFGVEKVKLYFMVGIPTETD
EDIEELINLTKKVKKEIRKVEISVNPMIPKPHTDFEVEEFDLSSKKKIKYIEKALKKEGIRVEYENFNSMICQCILARGD
ENLSKYLDYSKNPTSLISALKKDRLLDKYLGRFEDKGVWKNIIL

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y966_METJA (Q58376)

Other databases:

- EMBL:   L77117
- PIR:   F64420
- RefSeq:   NP_247961.1
- ProteinModelPortal:   Q58376
- GeneID:   1451864
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0966
- NMPDR:   fig|243232.1.peg.998
- TIGR:   MJ0966
- HOGENOM:   HBG539158
- OMA:   AGISCLA
- ProtClustDB:   CLSK2749942
- BioCyc:   MJAN243232:MJ_0966-MONOMER
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197
- PANTHER:   PTHR11918
- SMART:   SM00729

Pfam domain/function: PF04055 Radical_SAM

EC number: NA

Molecular weight: Translated: 51349; Mature: 51349

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKMIKNVAIIYPNKFKAGISCLAVHVLANHLSKYRDLNVGVYFLENYDRIKNFDAIFIT
CCEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHCCCCEEEEE
LQYENDYFNAIKIIKDLRKNNPNAIFVAGGPCVMENFFPIAEFFDVFIVGEIEGSDVMLK
EEECCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCHHHHCCEEEEEEECCCHHHHH
VINREFDVEGVYSKYLEKDKVKRIYPKKLTIDDYPIYQPTSEEGAYGKSFLLEIGRGCPR
HHCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCHH
RCRFCLARAIYYPPRFRKLDDLMYLAEEGVKVNKVNKVALIAPSVGDYKYIVELCNFLDD
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHH
MGVHISPSSLRADTLNDDLMRILKPKTLTIAPEAGSERLREFIKKDIRERDIANAIDLAK
CCCEECCCCCCCCCCCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KFGVEKVKLYFMVGIPTETDEDIEELINLTKKVKKEIRKVEISVNPMIPKPHTDFEVEEF
HCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHC
DLSSKKKIKYIEKALKKEGIRVEYENFNSMICQCILARGDENLSKYLDYSKNPTSLISAL
CCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHH
KKDRLLDKYLGRFEDKGVWKNIIL
HHHHHHHHHHHHCCCCCCHHHCCC
>Mature Secondary Structure
MIKMIKNVAIIYPNKFKAGISCLAVHVLANHLSKYRDLNVGVYFLENYDRIKNFDAIFIT
CCEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHCCCCEEEEE
LQYENDYFNAIKIIKDLRKNNPNAIFVAGGPCVMENFFPIAEFFDVFIVGEIEGSDVMLK
EEECCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCHHHHCCEEEEEEECCCHHHHH
VINREFDVEGVYSKYLEKDKVKRIYPKKLTIDDYPIYQPTSEEGAYGKSFLLEIGRGCPR
HHCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCHH
RCRFCLARAIYYPPRFRKLDDLMYLAEEGVKVNKVNKVALIAPSVGDYKYIVELCNFLDD
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHH
MGVHISPSSLRADTLNDDLMRILKPKTLTIAPEAGSERLREFIKKDIRERDIANAIDLAK
CCCEECCCCCCCCCCCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KFGVEKVKLYFMVGIPTETDEDIEELINLTKKVKKEIRKVEISVNPMIPKPHTDFEVEEF
HCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHC
DLSSKKKIKYIEKALKKEGIRVEYENFNSMICQCILARGDENLSKYLDYSKNPTSLISAL
CCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHH
KKDRLLDKYLGRFEDKGVWKNIIL
HHHHHHHHHHHHCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087