Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669139

Identifier: 15669139

GI number: 15669139

Start: 881265

End: 881636

Strand: Reverse

Name: 15669139

Synonym: MJ0949

Alternate gene names: NA

Gene position: 881636-881265 (Counterclockwise)

Preceding gene: 15669140

Following gene: 15669138

Centisome position: 52.95

GC content: 32.53

Gene sequence:

>372_bases
ATGACGATATTGCTAATCAGAGGAGATAGTTATGAAAAATTAAAGAATGCCTTAGCTGATGTTGATAGGCATGCAGAGCT
AACAATTATTGGAAAGCCAAAAATTATTGTTCCAGAAGCTGCAGATGAAATATTAAGTCATATATTGGGGGAAGTTAAAA
AACCATGTAAAACTGCATGCTTAGCAAAGATTGCTGAAAAAGCACCAAAAGCAATAGATAGAATTAGAAAAATTCATCCA
CCTGCTCATATTGTTGTGATTAGTGAGAGATATGGTGACATATATTATAAGTTATTGGACGACTTCCCAAAACTTCCAGT
GTTAAAGGGCTATTACAAATCTAAGAAAAAAGATAAGAAGAAAAAGAAGTAA

Upstream 100 bases:

>100_bases
TTTATGCTTGAGGAATATTTGAAACATAATGATAGACATTTGAGGATAAAATACTAAGAAAATTTAAAATTAATATTAAA
AAACACGTTTAGGGATAGTT

Downstream 100 bases:

>100_bases
ATTGGTTAATTTTCATTAGTATTAGGTGATTTTTATGAAAAATAGCACAGAATATCCAACATTAGTGGAAATAAAAGACA
AAAAAGGAGAAATGATTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MTILLIRGDSYEKLKNALADVDRHAELTIIGKPKIIVPEAADEILSHILGEVKKPCKTACLAKIAEKAPKAIDRIRKIHP
PAHIVVISERYGDIYYKLLDDFPKLPVLKGYYKSKKKDKKKKK

Sequences:

>Translated_123_residues
MTILLIRGDSYEKLKNALADVDRHAELTIIGKPKIIVPEAADEILSHILGEVKKPCKTACLAKIAEKAPKAIDRIRKIHP
PAHIVVISERYGDIYYKLLDDFPKLPVLKGYYKSKKKDKKKKK
>Mature_122_residues
TILLIRGDSYEKLKNALADVDRHAELTIIGKPKIIVPEAADEILSHILGEVKKPCKTACLAKIAEKAPKAIDRIRKIHPP
AHIVVISERYGDIYYKLLDDFPKLPVLKGYYKSKKKDKKKKK

Specific function: Unknown

COG id: COG1844

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y949_METJA (Q58359)

Other databases:

- EMBL:   L77117
- PIR:   E64418
- RefSeq:   NP_247944.1
- GeneID:   1451846
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0949
- NMPDR:   fig|243232.1.peg.981
- TIGR:   MJ0949
- HOGENOM:   HBG551680
- OMA:   DIHPPAH
- ProtClustDB:   CLSK865260
- BioCyc:   MJAN243232:MJ_0949-MONOMER
- InterPro:   IPR016192
- InterPro:   IPR007154
- PIRSF:   PIRSF006606

Pfam domain/function: PF04009 DUF356

EC number: NA

Molecular weight: Translated: 13959; Mature: 13828

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTILLIRGDSYEKLKNALADVDRHAELTIIGKPKIIVPEAADEILSHILGEVKKPCKTAC
CEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCEECCHHHHHHHHHHHHHHHHHHHHHH
LAKIAEKAPKAIDRIRKIHPPAHIVVISERYGDIYYKLLDDFPKLPVLKGYYKSKKKDKK
HHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
KKK
CCC
>Mature Secondary Structure 
TILLIRGDSYEKLKNALADVDRHAELTIIGKPKIIVPEAADEILSHILGEVKKPCKTAC
EEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCEECCHHHHHHHHHHHHHHHHHHHHHH
LAKIAEKAPKAIDRIRKIHPPAHIVVISERYGDIYYKLLDDFPKLPVLKGYYKSKKKDKK
HHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
KKK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087