| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669134
Identifier: 15669134
GI number: 15669134
Start: 875299
End: 875661
Strand: Direct
Name: 15669134
Synonym: MJ0944
Alternate gene names: NA
Gene position: 875299-875661 (Clockwise)
Preceding gene: 15669132
Following gene: 15669143
Centisome position: 52.57
GC content: 23.69
Gene sequence:
>363_bases ATGCTTATTGGGATACTAAGCAAAAAATATGTTAAAGAAATTTTGGAACTACTTAATGAAAAAGGAGAACTCCATTTTAG TCAAATTCATAAAGAAATTCCTACTCATATGAGCAGTTTAAACAGAACATTAAATGAATTGGTAAAATTGGGATTAATAT CAAAAAGGAAAGAAGACAACAAACAGGCATTACCAAAAACATACTATAAATTAACACCATTAGGAAAAAAGGCACTATTA TTATATGAAGTAGAAAAAATTATTGAAAATTCAAAAAATAATCAAAATATCATCATTCAAATTATTAATGGAAAAAATCA TAATATCATCAACGCAAAAATTGTTAATATTCATAATAAATGA
Upstream 100 bases:
>100_bases CTTTTCTCTTTTTTGTGAAATTTAGCAAAAATGTTAATTATCGTATAAATATGAAAATTCTCAAAAAAGCAAAAATAAAA AATCATAAAAGGGCTAAATC
Downstream 100 bases:
>100_bases TTGAAAATCTTAATATAATTTTTATTCTATTGGCTCAACTCTAACGTTGTCATAGTATGCTCTACCCCCTCCAATTCCTA TTCCACCTTTAAGTATTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MLIGILSKKYVKEILELLNEKGELHFSQIHKEIPTHMSSLNRTLNELVKLGLISKRKEDNKQALPKTYYKLTPLGKKALL LYEVEKIIENSKNNQNIIIQIINGKNHNIINAKIVNIHNK
Sequences:
>Translated_120_residues MLIGILSKKYVKEILELLNEKGELHFSQIHKEIPTHMSSLNRTLNELVKLGLISKRKEDNKQALPKTYYKLTPLGKKALL LYEVEKIIENSKNNQNIIIQIINGKNHNIINAKIVNIHNK >Mature_120_residues MLIGILSKKYVKEILELLNEKGELHFSQIHKEIPTHMSSLNRTLNELVKLGLISKRKEDNKQALPKTYYKLTPLGKKALL LYEVEKIIENSKNNQNIIIQIINGKNHNIINAKIVNIHNK
Specific function: Unknown
COG id: COG1733
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0361
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y944_METJA (Q58354)
Other databases:
- EMBL: L77117 - PIR: H64417 - RefSeq: NP_247939.1 - ProteinModelPortal: Q58354 - SMR: Q58354 - GeneID: 1451841 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0944 - NMPDR: fig|243232.1.peg.976 - TIGR: MJ0944 - HOGENOM: HBG752497 - OMA: WTEETEY - ProtClustDB: CLSK2749936 - BioCyc: MJAN243232:MJ_0944-MONOMER - InterPro: IPR005149 - InterPro: IPR011991 - Gene3D: G3DSA:1.10.10.10
Pfam domain/function: PF03551 PadR
EC number: NA
Molecular weight: Translated: 13863; Mature: 13863
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIGILSKKYVKEILELLNEKGELHFSQIHKEIPTHMSSLNRTLNELVKLGLISKRKEDN CEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KQALPKTYYKLTPLGKKALLLYEVEKIIENSKNNQNIIIQIINGKNHNIINAKIVNIHNK HHCCCHHHHEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEEEEECCC >Mature Secondary Structure MLIGILSKKYVKEILELLNEKGELHFSQIHKEIPTHMSSLNRTLNELVKLGLISKRKEDN CEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KQALPKTYYKLTPLGKKALLLYEVEKIIENSKNNQNIIIQIINGKNHNIINAKIVNIHNK HHCCCHHHHEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087