| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669133
Identifier: 15669133
GI number: 15669133
Start: 873866
End: 875119
Strand: Reverse
Name: 15669133
Synonym: MJ0943
Alternate gene names: NA
Gene position: 875119-873866 (Counterclockwise)
Preceding gene: 15669135
Following gene: 15669128
Centisome position: 52.56
GC content: 30.3
Gene sequence:
>1254_bases GTGATAACAATGGACACGATAAGAAAAGCTTTAGTTTGTTTTAGCATACTCTCTATTTTGGTTTTAGCTTGTGGGTGTGT GAATACTCCAGAAAAGATAGATATAAATATTAATTCAAATACGAATAATGGAGAAAATACTGAAAAACCTATAAATCAAG AAAATCAAAATGTTAATAATGTAGAAAATAAAAAAGAAAGTCAATCAACACAGAATATTCAAAGTTATGAAAATAAAGAA ATTAAAAATCAAGAAAATCATCCTTTACAAAGTAATCAAAATTATGAACAGACCAATGGTAATTTTAATGAAGAGAATGA AAATGCCATGACTAATGTTGGAGAGTCAGAAGTAAATTATAATAATGAACCAGCATATAATTATTATATCGAAATAACTT ATCCAGATGGCACTATTCCTGATAAAATAGAAGAACAAATGTTGTATTATATTAAAGTCATTGACCCAATAGTTGGAGGG TTAGCAGGAATTGACATATATGTTGATGGCAACTACATTGGAACATTAGATGATGTATACGGGATTGTAGAGTGTGTATT CTATGAGCCAGGTTATCACACAATAACAGCAGAAGATAATGGAAAAATTTTAGCATCTAAAACTGTATATGTTGAGGAAG GGACTGCATACAACAGTGGAGAATCCGAAAATTATGATGAGTATGATAATAATTATGAAAGCAATGACTTACAACAAACA CAAACTCAGTTTTCAGAAATAGAAGTATATGTGGATGATATAAAACCCAGTAATAGTATTATAATTACAAAATTAGCTAT GAATCCAGGTTTTTTAGCATCAATAAATGGAATCTCTCCAGACATTGGTGTAAATATAGAAATGGAAAATGGAGAAAAAA TAAATTTAAAATATGTTTCTATGGATGTAGATTTAATAATAGATAATCCAAATTCAGAGAGTATAACAATCGATAAAATA ATCTTAAATATGTTTGATGATGAAGGTCATAGTTTAGGACGAGGAGAGGTATCAAATATAGTAATAACACCAGGAGAAAA TCCAGTAACTGTTAAAGTAAATATACCGATTAATAAGATGGGATATGAAATCCTTAGAAAATTAAGTGGAGAAGAAGTTT TTGCTGAAATATCTGGAAGTGCATATATTGAAGGCAGTGGGGAAGTCCCATTTAGTGGAGAGGCGGATTTATTGCCACCA TTACCTACACCACCATTCCCACTACCTCCATTGCCACCATTTCCAACTGAATAA
Upstream 100 bases:
>100_bases ATTTCACAAAAAAGAGAAAAGTTTATATTTGTGTATAGTTATATCTATGTTAGTAAATATGCTAAATTTAACAAAAATGT TAAAAGTGGAATTTAATTAG
Downstream 100 bases:
>100_bases CAAAATTTTAAATCTTTTACATTTTTATATCTCCAAATTTACCAATAACCGAAAAGTATATATACTACTTATTATTATTT AATTTTTGCTTCTGGTGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MITMDTIRKALVCFSILSILVLACGCVNTPEKIDININSNTNNGENTEKPINQENQNVNNVENKKESQSTQNIQSYENKE IKNQENHPLQSNQNYEQTNGNFNEENENAMTNVGESEVNYNNEPAYNYYIEITYPDGTIPDKIEEQMLYYIKVIDPIVGG LAGIDIYVDGNYIGTLDDVYGIVECVFYEPGYHTITAEDNGKILASKTVYVEEGTAYNSGESENYDEYDNNYESNDLQQT QTQFSEIEVYVDDIKPSNSIIITKLAMNPGFLASINGISPDIGVNIEMENGEKINLKYVSMDVDLIIDNPNSESITIDKI ILNMFDDEGHSLGRGEVSNIVITPGENPVTVKVNIPINKMGYEILRKLSGEEVFAEISGSAYIEGSGEVPFSGEADLLPP LPTPPFPLPPLPPFPTE
Sequences:
>Translated_417_residues MITMDTIRKALVCFSILSILVLACGCVNTPEKIDININSNTNNGENTEKPINQENQNVNNVENKKESQSTQNIQSYENKE IKNQENHPLQSNQNYEQTNGNFNEENENAMTNVGESEVNYNNEPAYNYYIEITYPDGTIPDKIEEQMLYYIKVIDPIVGG LAGIDIYVDGNYIGTLDDVYGIVECVFYEPGYHTITAEDNGKILASKTVYVEEGTAYNSGESENYDEYDNNYESNDLQQT QTQFSEIEVYVDDIKPSNSIIITKLAMNPGFLASINGISPDIGVNIEMENGEKINLKYVSMDVDLIIDNPNSESITIDKI ILNMFDDEGHSLGRGEVSNIVITPGENPVTVKVNIPINKMGYEILRKLSGEEVFAEISGSAYIEGSGEVPFSGEADLLPP LPTPPFPLPPLPPFPTE >Mature_417_residues MITMDTIRKALVCFSILSILVLACGCVNTPEKIDININSNTNNGENTEKPINQENQNVNNVENKKESQSTQNIQSYENKE IKNQENHPLQSNQNYEQTNGNFNEENENAMTNVGESEVNYNNEPAYNYYIEITYPDGTIPDKIEEQMLYYIKVIDPIVGG LAGIDIYVDGNYIGTLDDVYGIVECVFYEPGYHTITAEDNGKILASKTVYVEEGTAYNSGESENYDEYDNNYESNDLQQT QTQFSEIEVYVDDIKPSNSIIITKLAMNPGFLASINGISPDIGVNIEMENGEKINLKYVSMDVDLIIDNPNSESITIDKI ILNMFDDEGHSLGRGEVSNIVITPGENPVTVKVNIPINKMGYEILRKLSGEEVFAEISGSAYIEGSGEVPFSGEADLLPP LPTPPFPLPPLPPFPTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y943_METJA (Q58353)
Other databases:
- EMBL: L77117 - PIR: G64417 - RefSeq: NP_247938.1 - ProteinModelPortal: Q58353 - GeneID: 1451840 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0943 - NMPDR: fig|243232.1.peg.975 - TIGR: MJ0943 - ProtClustDB: CLSK2749935 - BioCyc: MJAN243232:MJ_0943-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46356; Mature: 46356
Theoretical pI: Translated: 3.80; Mature: 3.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xafa0dc4)-; HASH(0xd5f7b18)-;
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITMDTIRKALVCFSILSILVLACGCVNTPEKIDININSNTNNGENTEKPINQENQNVNN CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCH VENKKESQSTQNIQSYENKEIKNQENHPLQSNQNYEQTNGNFNEENENAMTNVGESEVNY HHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHCCCCCCCCC NNEPAYNYYIEITYPDGTIPDKIEEQMLYYIKVIDPIVGGLAGIDIYVDGNYIGTLDDVY CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEECHHHHH GIVECVFYEPGYHTITAEDNGKILASKTVYVEEGTAYNSGESENYDEYDNNYESNDLQQT HEEEEEEECCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCHHCCCCCCCHHHHH QTQFSEIEVYVDDIKPSNSIIITKLAMNPGFLASINGISPDIGVNIEMENGEKINLKYVS HHHHHEEEEEEECCCCCCCEEEEEEECCCCEEEEECCCCCCCEEEEEECCCCEEEEEEEE MDVDLIIDNPNSESITIDKIILNMFDDEGHSLGRGEVSNIVITPGENPVTVKVNIPINKM EEEEEEEECCCCCCEEHHEEEEEHHCCCCCCCCCCCCCEEEEECCCCEEEEEEECCHHHH GYEILRKLSGEEVFAEISGSAYIEGSGEVPFSGEADLLPPLPTPPFPLPPLPPFPTE HHHHHHHCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH >Mature Secondary Structure MITMDTIRKALVCFSILSILVLACGCVNTPEKIDININSNTNNGENTEKPINQENQNVNN CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCH VENKKESQSTQNIQSYENKEIKNQENHPLQSNQNYEQTNGNFNEENENAMTNVGESEVNY HHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHCCCCCCCCC NNEPAYNYYIEITYPDGTIPDKIEEQMLYYIKVIDPIVGGLAGIDIYVDGNYIGTLDDVY CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEECHHHHH GIVECVFYEPGYHTITAEDNGKILASKTVYVEEGTAYNSGESENYDEYDNNYESNDLQQT HEEEEEEECCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCHHCCCCCCCHHHHH QTQFSEIEVYVDDIKPSNSIIITKLAMNPGFLASINGISPDIGVNIEMENGEKINLKYVS HHHHHEEEEEEECCCCCCCEEEEEEECCCCEEEEECCCCCCCEEEEEECCCCEEEEEEEE MDVDLIIDNPNSESITIDKIILNMFDDEGHSLGRGEVSNIVITPGENPVTVKVNIPINKM EEEEEEEECCCCCCEEHHEEEEEHHCCCCCCCCCCCCCEEEEECCCCEEEEEEECCHHHH GYEILRKLSGEEVFAEISGSAYIEGSGEVPFSGEADLLPPLPTPPFPLPPLPPFPTE HHHHHHHCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087