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The map label for this gene is ybgI [C]

Identifier: 15669117

GI number: 15669117

Start: 856663

End: 857412

Strand: Reverse

Name: ybgI [C]

Synonym: MJ0927

Alternate gene names: 15669117

Gene position: 857412-856663 (Counterclockwise)

Preceding gene: 15669118

Following gene: 15669115

Centisome position: 51.5

GC content: 30.0

Gene sequence:

>750_bases
ATGGAGGTTGTAAATATGAAAGCTAAAGAGATTATAGAGTTTATTGAAACCTTTGCTCCTAAAGATTTGGCTATTGAGGG
AGATAACATTGGTCTTCAGGTTGGAGACAACTTAGATAAAGAGATAAAAAAGCTAGGTATTGCCTTAGACCCTTCATTAT
CAGTTATTAAAAAAGCAGAAAAAGAAGGAGTAGATTTTTTATTTACCCACCATCCATTATTAAAAGACCCTATAAGAAAT
TTTACTGGAGTTATTTACAAAAAACTAAAGATATTAATGGAAAATGACATCATCCTCTACTCTGCTCATACAAATTTAGA
TATATGCAAAAATGGGTTGAATGATGCTTTAGCTGAACTTTATAATTTAGAAAATCCAAAGCCCTTATATGATAATGGAC
TTGGAAGAGTTGGAATTTTTAAAGGAAGTTTTGAGGAATTTTTGGAGATAACTAAAAAATACATTCACAAAAACCCTATT
GTTGTTAAAAGTAAAGAGGTAGATGACAACTTTAAATTAGCTGTTTTATCTGGTTATGGATTGTCTCAATCATCCATAAA
GTATGTTGCTGAGAAAGCAGATGTCTATCTTTCTGGAGATTTAACTCATCATTCAAAAATTTTAGCTGAGGAGCTTGGTT
TAGTGGTTGTTGATGCTACTCATTACTCAACTGAAGTTTTTGGATTAAAGAAATTTAAAGAGTTCTTATCTTCAAATTTA
GATTTAGAAATAATTAGTTTAGATTTCTAA

Upstream 100 bases:

>100_bases
GAGAAAAAGAAACAATAAACAAATTAAAACCCCTTGGTTTTAAAGTTGAAATATCCGCCCGTTTAAAAGTTCCATTTGAG
GAACTTATGGTTATAAATGC

Downstream 100 bases:

>100_bases
TTTTAATTTAAAAAAGTAATATTCAGTATAATCTAATATCAATTCTATATTCCACGTTGTATGGTTTAGCCTCTAAAATT
TCCATTAATCTTTTCTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MEVVNMKAKEIIEFIETFAPKDLAIEGDNIGLQVGDNLDKEIKKLGIALDPSLSVIKKAEKEGVDFLFTHHPLLKDPIRN
FTGVIYKKLKILMENDIILYSAHTNLDICKNGLNDALAELYNLENPKPLYDNGLGRVGIFKGSFEEFLEITKKYIHKNPI
VVKSKEVDDNFKLAVLSGYGLSQSSIKYVAEKADVYLSGDLTHHSKILAEELGLVVVDATHYSTEVFGLKKFKEFLSSNL
DLEIISLDF

Sequences:

>Translated_249_residues
MEVVNMKAKEIIEFIETFAPKDLAIEGDNIGLQVGDNLDKEIKKLGIALDPSLSVIKKAEKEGVDFLFTHHPLLKDPIRN
FTGVIYKKLKILMENDIILYSAHTNLDICKNGLNDALAELYNLENPKPLYDNGLGRVGIFKGSFEEFLEITKKYIHKNPI
VVKSKEVDDNFKLAVLSGYGLSQSSIKYVAEKADVYLSGDLTHHSKILAEELGLVVVDATHYSTEVFGLKKFKEFLSSNL
DLEIISLDF
>Mature_249_residues
MEVVNMKAKEIIEFIETFAPKDLAIEGDNIGLQVGDNLDKEIKKLGIALDPSLSVIKKAEKEGVDFLFTHHPLLKDPIRN
FTGVIYKKLKILMENDIILYSAHTNLDICKNGLNDALAELYNLENPKPLYDNGLGRVGIFKGSFEEFLEITKKYIHKNPI
VVKSKEVDDNFKLAVLSGYGLSQSSIKYVAEKADVYLSGDLTHHSKILAEELGLVVVDATHYSTEVFGLKKFKEFLSSNL
DLEIISLDF

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Drosophila melanogaster, GI19921430, Length=258, Percent_Identity=25.1937984496124, Blast_Score=80, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 27936; Mature: 27936

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVVNMKAKEIIEFIETFAPKDLAIEGDNIGLQVGDNLDKEIKKLGIALDPSLSVIKKAE
CCCCCCCHHHHHHHHHHHCCCCEEEECCCEEEEECCCHHHHHHHHCCCCCCCHHHHHHHH
KEGVDFLFTHHPLLKDPIRNFTGVIYKKLKILMENDIILYSAHTNLDICKNGLNDALAEL
HCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCHHHHHHHH
YNLENPKPLYDNGLGRVGIFKGSFEEFLEITKKYIHKNPIVVKSKEVDDNFKLAVLSGYG
HCCCCCCCHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCC
LSQSSIKYVAEKADVYLSGDLTHHSKILAEELGLVVVDATHYSTEVFGLKKFKEFLSSNL
CCHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCC
DLEIISLDF
CEEEEEECC
>Mature Secondary Structure
MEVVNMKAKEIIEFIETFAPKDLAIEGDNIGLQVGDNLDKEIKKLGIALDPSLSVIKKAE
CCCCCCCHHHHHHHHHHHCCCCEEEECCCEEEEECCCHHHHHHHHCCCCCCCHHHHHHHH
KEGVDFLFTHHPLLKDPIRNFTGVIYKKLKILMENDIILYSAHTNLDICKNGLNDALAEL
HCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCHHHHHHHH
YNLENPKPLYDNGLGRVGIFKGSFEEFLEITKKYIHKNPIVVKSKEVDDNFKLAVLSGYG
HCCCCCCCHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCC
LSQSSIKYVAEKADVYLSGDLTHHSKILAEELGLVVVDATHYSTEVFGLKKFKEFLSSNL
CCHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCC
DLEIISLDF
CEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]