| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669115
Identifier: 15669115
GI number: 15669115
Start: 855208
End: 855528
Strand: Reverse
Name: 15669115
Synonym: MJ0925
Alternate gene names: NA
Gene position: 855528-855208 (Counterclockwise)
Preceding gene: 15669117
Following gene: 15669114
Centisome position: 51.38
GC content: 33.33
Gene sequence:
>321_bases ATGTCAATCTTCTATGTGCTTGGAAAGAAGGGAACGATAGAGATATTATATAAAATTAAAGAGGGAGTAAATTCCTTCAC GAGCATAAAAAACGCCTTAGATATGGAAGGATGTGGGGTTAGCACGAGAACATTGGCGGAAAGATTAAATGAATTGGAGG ATGAAAATTTAATACAGAAAGATGGAAGTAAATACTATTTAACAAAGAAAGGCCAGGAAGCATTGGAAATTATTGAAAAT GTTATGAAATGGGAAGCAAAGTGGAAAGAAGCAAAAATTCCAAAGATTATAATAGGAATGCTTGGAGACAAAGAAAGATA A
Upstream 100 bases:
>100_bases AAGTATTAAACTATATAAACCTAACCATAATGAAATAAATGGAAGAAAATAAATTGTCAAAGTTTAGTAAATTTTATTAA AATAAATTTAGCGTGGGATT
Downstream 100 bases:
>100_bases TCACAAAAAACATGCTGTTAAAACTTAATTTCCTTTAAATGTTTTGTTAAACGCTTTTTGGAATAATTCTTTTAAGCAAT AGTTGAATAAATAATTGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MSIFYVLGKKGTIEILYKIKEGVNSFTSIKNALDMEGCGVSTRTLAERLNELEDENLIQKDGSKYYLTKKGQEALEIIEN VMKWEAKWKEAKIPKIIIGMLGDKER
Sequences:
>Translated_106_residues MSIFYVLGKKGTIEILYKIKEGVNSFTSIKNALDMEGCGVSTRTLAERLNELEDENLIQKDGSKYYLTKKGQEALEIIEN VMKWEAKWKEAKIPKIIIGMLGDKER >Mature_105_residues SIFYVLGKKGTIEILYKIKEGVNSFTSIKNALDMEGCGVSTRTLAERLNELEDENLIQKDGSKYYLTKKGQEALEIIENV MKWEAKWKEAKIPKIIIGMLGDKER
Specific function: Unknown
COG id: COG1733
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH hxlR-type DNA-binding domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y925_METJA (Q58335)
Other databases:
- EMBL: L77117 - PIR: E64415 - RefSeq: NP_247920.1 - ProteinModelPortal: Q58335 - GeneID: 1451814 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0925 - NMPDR: fig|243232.1.peg.957 - TIGR: MJ0925 - OMA: NALDMEG - ProtClustDB: CLSK2517670 - BioCyc: MJAN243232:MJ_0925-MONOMER - GO: GO:0006350 - InterPro: IPR002577 - InterPro: IPR011991 - Gene3D: G3DSA:1.10.10.10
Pfam domain/function: PF01638 DUF24
EC number: NA
Molecular weight: Translated: 12115; Mature: 11984
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: PS51118 HTH_HXLR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIFYVLGKKGTIEILYKIKEGVNSFTSIKNALDMEGCGVSTRTLAERLNELEDENLIQK CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHH DGSKYYLTKKGQEALEIIENVMKWEAKWKEAKIPKIIIGMLGDKER CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCCCC >Mature Secondary Structure SIFYVLGKKGTIEILYKIKEGVNSFTSIKNALDMEGCGVSTRTLAERLNELEDENLIQK EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHH DGSKYYLTKKGQEALEIIENVMKWEAKWKEAKIPKIIIGMLGDKER CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087