Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669115

Identifier: 15669115

GI number: 15669115

Start: 855208

End: 855528

Strand: Reverse

Name: 15669115

Synonym: MJ0925

Alternate gene names: NA

Gene position: 855528-855208 (Counterclockwise)

Preceding gene: 15669117

Following gene: 15669114

Centisome position: 51.38

GC content: 33.33

Gene sequence:

>321_bases
ATGTCAATCTTCTATGTGCTTGGAAAGAAGGGAACGATAGAGATATTATATAAAATTAAAGAGGGAGTAAATTCCTTCAC
GAGCATAAAAAACGCCTTAGATATGGAAGGATGTGGGGTTAGCACGAGAACATTGGCGGAAAGATTAAATGAATTGGAGG
ATGAAAATTTAATACAGAAAGATGGAAGTAAATACTATTTAACAAAGAAAGGCCAGGAAGCATTGGAAATTATTGAAAAT
GTTATGAAATGGGAAGCAAAGTGGAAAGAAGCAAAAATTCCAAAGATTATAATAGGAATGCTTGGAGACAAAGAAAGATA
A

Upstream 100 bases:

>100_bases
AAGTATTAAACTATATAAACCTAACCATAATGAAATAAATGGAAGAAAATAAATTGTCAAAGTTTAGTAAATTTTATTAA
AATAAATTTAGCGTGGGATT

Downstream 100 bases:

>100_bases
TCACAAAAAACATGCTGTTAAAACTTAATTTCCTTTAAATGTTTTGTTAAACGCTTTTTGGAATAATTCTTTTAAGCAAT
AGTTGAATAAATAATTGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MSIFYVLGKKGTIEILYKIKEGVNSFTSIKNALDMEGCGVSTRTLAERLNELEDENLIQKDGSKYYLTKKGQEALEIIEN
VMKWEAKWKEAKIPKIIIGMLGDKER

Sequences:

>Translated_106_residues
MSIFYVLGKKGTIEILYKIKEGVNSFTSIKNALDMEGCGVSTRTLAERLNELEDENLIQKDGSKYYLTKKGQEALEIIEN
VMKWEAKWKEAKIPKIIIGMLGDKER
>Mature_105_residues
SIFYVLGKKGTIEILYKIKEGVNSFTSIKNALDMEGCGVSTRTLAERLNELEDENLIQKDGSKYYLTKKGQEALEIIENV
MKWEAKWKEAKIPKIIIGMLGDKER

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y925_METJA (Q58335)

Other databases:

- EMBL:   L77117
- PIR:   E64415
- RefSeq:   NP_247920.1
- ProteinModelPortal:   Q58335
- GeneID:   1451814
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0925
- NMPDR:   fig|243232.1.peg.957
- TIGR:   MJ0925
- OMA:   NALDMEG
- ProtClustDB:   CLSK2517670
- BioCyc:   MJAN243232:MJ_0925-MONOMER
- GO:   GO:0006350
- InterPro:   IPR002577
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF01638 DUF24

EC number: NA

Molecular weight: Translated: 12115; Mature: 11984

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIFYVLGKKGTIEILYKIKEGVNSFTSIKNALDMEGCGVSTRTLAERLNELEDENLIQK
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHH
DGSKYYLTKKGQEALEIIENVMKWEAKWKEAKIPKIIIGMLGDKER
CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCCCC
>Mature Secondary Structure 
SIFYVLGKKGTIEILYKIKEGVNSFTSIKNALDMEGCGVSTRTLAERLNELEDENLIQK
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHH
DGSKYYLTKKGQEALEIIENVMKWEAKWKEAKIPKIIIGMLGDKER
CCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087