| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15669111
Identifier: 15669111
GI number: 15669111
Start: 851567
End: 852469
Strand: Reverse
Name: 15669111
Synonym: MJ0921
Alternate gene names: NA
Gene position: 852469-851567 (Counterclockwise)
Preceding gene: 15669112
Following gene: 15669110
Centisome position: 51.2
GC content: 34.22
Gene sequence:
>903_bases ATGTCAGTAAATTATAAAAGTGTCATTGCAATGGTAGATGATGCCTTAAACCTTGTTGAGATAGTTGAAGAACATCCTTG TCCAAACGGTAGTGAATGGGTTATCTATCAATATCAAAGAACCTCTCCTCTAATCTTATCAGCATGGAGAGAAGGAAACA AACACCACTTTGTAACAAAAATTGGTAAAGAAAAATTAAATTTAGTCCCTTCATTATCGGCAGCAGGAATTGAAGAAGTT TATATAGAAAATAATAGAGTTCATATTGTCTATGCGGGATTAGCTGGAGGAGGCGTAGGAGCTGAGTTAAGGAAGGGAGC CAAAAATGTCCTTGAAGTAAATATTTTAGAAAAGGGAGGTGGTTCAAGGCTTGGAAAGGCAGAGGTTATAACTCCAAAAA TGGAAAAGGTTATTATTGGAATTGATGACACAGATACAAAAGAAGAAGGAGCTACATGGGTTTTAGCACATGAGATTGGT TTAGAAGTTGAGAAAGAAGGGCTTGGTTATTATTTAGACCATACAATTGTTCAACTTTATCCTGGAAATCCAAATAAAAC TCAAAACTGTGTCTCCATCGCTTTAAGTTTTGCGGTCTATCCAGAATATAAATACAAATTGGATAAATTCATTAAAAAAT TATTAAAAGAAAGAAGTTTATCAGATGAAACAGCAATGGCTGTTTATTATGGCCTTTTCCCATCAAAAAGTATGAAGCTC TTTGCATTAAAAGCTAAAAAAGAAATGGTTAAAATAGAGGAAGCAAAATCTATAGCTTTAAGAAATAACATAAAAATAAT TCCAATTAATGGAGAAGGAGGGATAATAGGGGCTGTTGCTGCTTTAGGTTTGGCTGAGCATCACTCATTAGCTCCAAAGT TGTGTGAAGACATTAAGCTATAA
Upstream 100 bases:
>100_bases TTGTACATCCATATACAATTACGTCCTATACAATAATGATAATAAAAAATAATAAAATTTACCTCTGCGAAAGTCCTATT TAAATATCACAGGTGATTCT
Downstream 100 bases:
>100_bases TGTGAGACTATGCAAGATAAAGAGTTTAAAATAGCCATTATTGGCCCAGAAAATGCTGGAAAGTCATCAATAATGAACGC ATTGTTTGGAAAATATGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MSVNYKSVIAMVDDALNLVEIVEEHPCPNGSEWVIYQYQRTSPLILSAWREGNKHHFVTKIGKEKLNLVPSLSAAGIEEV YIENNRVHIVYAGLAGGGVGAELRKGAKNVLEVNILEKGGGSRLGKAEVITPKMEKVIIGIDDTDTKEEGATWVLAHEIG LEVEKEGLGYYLDHTIVQLYPGNPNKTQNCVSIALSFAVYPEYKYKLDKFIKKLLKERSLSDETAMAVYYGLFPSKSMKL FALKAKKEMVKIEEAKSIALRNNIKIIPINGEGGIIGAVAALGLAEHHSLAPKLCEDIKL
Sequences:
>Translated_300_residues MSVNYKSVIAMVDDALNLVEIVEEHPCPNGSEWVIYQYQRTSPLILSAWREGNKHHFVTKIGKEKLNLVPSLSAAGIEEV YIENNRVHIVYAGLAGGGVGAELRKGAKNVLEVNILEKGGGSRLGKAEVITPKMEKVIIGIDDTDTKEEGATWVLAHEIG LEVEKEGLGYYLDHTIVQLYPGNPNKTQNCVSIALSFAVYPEYKYKLDKFIKKLLKERSLSDETAMAVYYGLFPSKSMKL FALKAKKEMVKIEEAKSIALRNNIKIIPINGEGGIIGAVAALGLAEHHSLAPKLCEDIKL >Mature_299_residues SVNYKSVIAMVDDALNLVEIVEEHPCPNGSEWVIYQYQRTSPLILSAWREGNKHHFVTKIGKEKLNLVPSLSAAGIEEVY IENNRVHIVYAGLAGGGVGAELRKGAKNVLEVNILEKGGGSRLGKAEVITPKMEKVIIGIDDTDTKEEGATWVLAHEIGL EVEKEGLGYYLDHTIVQLYPGNPNKTQNCVSIALSFAVYPEYKYKLDKFIKKLLKERSLSDETAMAVYYGLFPSKSMKLF ALKAKKEMVKIEEAKSIALRNNIKIIPINGEGGIIGAVAALGLAEHHSLAPKLCEDIKL
Specific function: Unknown
COG id: COG1571
COG function: function code R; Predicted DNA-binding protein containing a Zn-ribbon domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y921_METJA (Q58331)
Other databases:
- EMBL: L77117 - PIR: A64415 - RefSeq: NP_247916.1 - GeneID: 1451810 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0921 - NMPDR: fig|243232.1.peg.953 - TIGR: MJ0921 - HOGENOM: HBG542049 - OMA: KTQNCVS - ProtClustDB: CLSK876388 - BioCyc: MJAN243232:MJ_0921-MONOMER - InterPro: IPR013696 - InterPro: IPR017674 - TIGRFAMs: TIGR03280
Pfam domain/function: PF08489 DUF1743
EC number: NA
Molecular weight: Translated: 33032; Mature: 32901
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVNYKSVIAMVDDALNLVEIVEEHPCPNGSEWVIYQYQRTSPLILSAWREGNKHHFVTK CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEECCCCCEEEEEH IGKEKLNLVPSLSAAGIEEVYIENNRVHIVYAGLAGGGVGAELRKGAKNVLEVNILEKGG HCHHHHCCCCCCCCCCCEEEEEECCEEEEEEEECCCCCCCHHHHHCCCCEEEEEEEECCC GSRLGKAEVITPKMEKVIIGIDDTDTKEEGATWVLAHEIGLEVEKEGLGYYLDHTIVQLY CCCCCCCEEECCCCEEEEEECCCCCCCCCCCEEEEEEECCCEEECCCCCEEECCEEEEEE PGNPNKTQNCVSIALSFAVYPEYKYKLDKFIKKLLKERSLSDETAMAVYYGLFPSKSMKL CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCCCEEE FALKAKKEMVKIEEAKSIALRNNIKIIPINGEGGIIGAVAALGLAEHHSLAPKLCEDIKL EEEEHHHHHHHHHHHHHEEECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHCCC >Mature Secondary Structure SVNYKSVIAMVDDALNLVEIVEEHPCPNGSEWVIYQYQRTSPLILSAWREGNKHHFVTK CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEECCCCCEEEEEH IGKEKLNLVPSLSAAGIEEVYIENNRVHIVYAGLAGGGVGAELRKGAKNVLEVNILEKGG HCHHHHCCCCCCCCCCCEEEEEECCEEEEEEEECCCCCCCHHHHHCCCCEEEEEEEECCC GSRLGKAEVITPKMEKVIIGIDDTDTKEEGATWVLAHEIGLEVEKEGLGYYLDHTIVQLY CCCCCCCEEECCCCEEEEEECCCCCCCCCCCEEEEEEECCCEEECCCCCEEECCEEEEEE PGNPNKTQNCVSIALSFAVYPEYKYKLDKFIKKLLKERSLSDETAMAVYYGLFPSKSMKL CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCCCEEE FALKAKKEMVKIEEAKSIALRNNIKIIPINGEGGIIGAVAALGLAEHHSLAPKLCEDIKL EEEEHHHHHHHHHHHHHEEECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087