Click here to switch to the map view.

The map label for this gene is flaD

Identifier: 15669085

GI number: 15669085

Start: 824466

End: 825494

Strand: Direct

Name: flaD

Synonym: MJ0895

Alternate gene names: 15669085

Gene position: 824466-825494 (Clockwise)

Preceding gene: 15669084

Following gene: 15669086

Centisome position: 49.52

GC content: 31.97

Gene sequence:

>1029_bases
ATGATACAAAAGACAATAAGTGAAACATCACCCCCTCCTATGTTCTCTGATGAGGAGATTCTTACAGAGGATGAAATTGA
GGAATATTTGGATAATTTAAAATCAAAATTGCCATCTTTTGTTATCATCCTATTAAAAAACAATTTAAGAGGTAAGAGGG
TTACAAAAAAACAGCTGGATAAGATTGTTGAGAGGATTACAGAGGTTCTATCAAAAGGAAGAAGGGATGATAAAACAGAA
GAGCTCAATAAAAAGCTTCAAACTCTTGAACAGAAGCTTGATGCTATAATGAAACTTACTACAATGGCTGTTTCAACAAA
AACTTCAGAAGAAATTGAAAAAATTAAAACTAATGAGAAAATAGAAATAGAAAATGCTCCTATTAAAATTAAAAGTGAAG
AAAAACCTGAAAAGCCGGTAGAAATTGAAGTAAGTAAGAAAAAAGAGACTATGGATACTGGTAAAAAAACTGAAACTGAA
GAGAAAGTTAAAGAGATTGAGGTTCCTAAACCTGTAGAAAAAACCCATGAAAAAGTTGAAGAAACTAAGACTAAGGGGGA
GATTAAGAAAGAAGTCAAAAAAGAAGTTAAATTAAAAAAATATGAGCTACCTAAAGAATCACCTATGGGGGGAAGCTTTA
TGACACCTATTGAAGAAGAGAAAGAATATAGATTGAATGACATTCCTGAAGATGCTGTTTCCATGACACTGGTATTTAAA
TGGCTGGAATTTTTGATTAGTAGGGGCGGTATGACATATTTACCAGACATTTTAGACTATTACAATAAGATTGGATGGAT
ATCCAACAGAGTTATATTAAAGCTATTAAGATTTGCTAAGAATATGAAAATAACATTTGATGAGGAAGAATTAAGACCAA
GGGATAAGCTATCACCAAGCGACCATATAGTGTCTCTCCTATATATAGAAAAGCTTGCAGGAAGACCAATAGATTCCGAG
ATTCTTGAGATGTTGGAGATAGAAATTAGGAGAATAAAAAAATGGGCTATAGAATTACAATCAATCTAA

Upstream 100 bases:

>100_bases
GGTTCTCTCTATTTGCACCAACTTGATATTAATCTTGATGAAATTATTGAAGAGGTTTTGGAGGAGGAGATTATAAAGTC
AATGTCCGGGGAGGATACTC

Downstream 100 bases:

>100_bases
AAATATGCTATTAAGATTATAAGCTTATCTAAAAAATTGTGGGGGAGGTGTTTAAAATGGATGGATTAGCTTCAACAATA
TTGGAAGTTCATAAACCTGC

Product: flagella-like protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MIQKTISETSPPPMFSDEEILTEDEIEEYLDNLKSKLPSFVIILLKNNLRGKRVTKKQLDKIVERITEVLSKGRRDDKTE
ELNKKLQTLEQKLDAIMKLTTMAVSTKTSEEIEKIKTNEKIEIENAPIKIKSEEKPEKPVEIEVSKKKETMDTGKKTETE
EKVKEIEVPKPVEKTHEKVEETKTKGEIKKEVKKEVKLKKYELPKESPMGGSFMTPIEEEKEYRLNDIPEDAVSMTLVFK
WLEFLISRGGMTYLPDILDYYNKIGWISNRVILKLLRFAKNMKITFDEEELRPRDKLSPSDHIVSLLYIEKLAGRPIDSE
ILEMLEIEIRRIKKWAIELQSI

Sequences:

>Translated_342_residues
MIQKTISETSPPPMFSDEEILTEDEIEEYLDNLKSKLPSFVIILLKNNLRGKRVTKKQLDKIVERITEVLSKGRRDDKTE
ELNKKLQTLEQKLDAIMKLTTMAVSTKTSEEIEKIKTNEKIEIENAPIKIKSEEKPEKPVEIEVSKKKETMDTGKKTETE
EKVKEIEVPKPVEKTHEKVEETKTKGEIKKEVKKEVKLKKYELPKESPMGGSFMTPIEEEKEYRLNDIPEDAVSMTLVFK
WLEFLISRGGMTYLPDILDYYNKIGWISNRVILKLLRFAKNMKITFDEEELRPRDKLSPSDHIVSLLYIEKLAGRPIDSE
ILEMLEIEIRRIKKWAIELQSI
>Mature_342_residues
MIQKTISETSPPPMFSDEEILTEDEIEEYLDNLKSKLPSFVIILLKNNLRGKRVTKKQLDKIVERITEVLSKGRRDDKTE
ELNKKLQTLEQKLDAIMKLTTMAVSTKTSEEIEKIKTNEKIEIENAPIKIKSEEKPEKPVEIEVSKKKETMDTGKKTETE
EKVKEIEVPKPVEKTHEKVEETKTKGEIKKEVKKEVKLKKYELPKESPMGGSFMTPIEEEKEYRLNDIPEDAVSMTLVFK
WLEFLISRGGMTYLPDILDYYNKIGWISNRVILKLLRFAKNMKITFDEEELRPRDKLSPSDHIVSLLYIEKLAGRPIDSE
ILEMLEIEIRRIKKWAIELQSI

Specific function: Unknown

COG id: COG3351

COG function: function code N; Putative archaeal flagellar protein D/E

Gene ontology:

Cell location: Archaeal flagellum (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.voltae flaD, also to flaE

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FLAD_METJA (Q58305)

Other databases:

- EMBL:   L77117
- PIR:   G64411
- RefSeq:   NP_247890.1
- ProteinModelPortal:   Q58305
- GeneID:   1451784
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0895
- NMPDR:   fig|243232.1.peg.927
- TIGR:   MJ0895
- OMA:   VFKWLEF
- ProtClustDB:   CLSK876376
- BioCyc:   MJAN243232:MJ_0895-MONOMER
- InterPro:   IPR006752
- InterPro:   IPR016682
- PIRSF:   PIRSF017066
- ProDom:   PD012942

Pfam domain/function: PF04659 Arch_fla_DE

EC number: NA

Molecular weight: Translated: 39951; Mature: 39951

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQKTISETSPPPMFSDEEILTEDEIEEYLDNLKSKLPSFVIILLKNNLRGKRVTKKQLD
CCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCHHEEEEEEECCCCCCHHHHHHHH
KIVERITEVLSKGRRDDKTEELNKKLQTLEQKLDAIMKLTTMAVSTKTSEEIEKIKTNEK
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
IEIENAPIKIKSEEKPEKPVEIEVSKKKETMDTGKKTETEEKVKEIEVPKPVEKTHEKVE
EEECCCCEEECCCCCCCCCEEEEECCHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHH
ETKTKGEIKKEVKKEVKLKKYELPKESPMGGSFMTPIEEEKEYRLNDIPEDAVSMTLVFK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHH
WLEFLISRGGMTYLPDILDYYNKIGWISNRVILKLLRFAKNMKITFDEEELRPRDKLSPS
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCCCCCCH
DHIVSLLYIEKLAGRPIDSEILEMLEIEIRRIKKWAIELQSI
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIQKTISETSPPPMFSDEEILTEDEIEEYLDNLKSKLPSFVIILLKNNLRGKRVTKKQLD
CCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCHHEEEEEEECCCCCCHHHHHHHH
KIVERITEVLSKGRRDDKTEELNKKLQTLEQKLDAIMKLTTMAVSTKTSEEIEKIKTNEK
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
IEIENAPIKIKSEEKPEKPVEIEVSKKKETMDTGKKTETEEKVKEIEVPKPVEKTHEKVE
EEECCCCEEECCCCCCCCCEEEEECCHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHH
ETKTKGEIKKEVKKEVKLKKYELPKESPMGGSFMTPIEEEKEYRLNDIPEDAVSMTLVFK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHH
WLEFLISRGGMTYLPDILDYYNKIGWISNRVILKLLRFAKNMKITFDEEELRPRDKLSPS
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCCCCCCH
DHIVSLLYIEKLAGRPIDSEILEMLEIEIRRIKKWAIELQSI
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087