| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669062
Identifier: 15669062
GI number: 15669062
Start: 795024
End: 795977
Strand: Direct
Name: 15669062
Synonym: MJ0871
Alternate gene names: NA
Gene position: 795024-795977 (Clockwise)
Preceding gene: 15669060
Following gene: 15669064
Centisome position: 47.75
GC content: 31.24
Gene sequence:
>954_bases GTGATAGTTGTGGATTACATAACTCCATTAATGGAGAGTATGAAAATCTCTGCTTATTATACCATAAGAATATCTATTAT TGTTTTAACAACGGTGTTTATTGTTAATTACATTATGAGTACTGGCATCATGAAGAAGCTAAGTAATATGTTATCTCCAA TTTTAAGAAGGCTTAAAGTTAATCCTCTTTCAATATCCTCTACTTTAGCATGCTTTTTCAGCCCAACAGTAGGATACTCA ATTTTAGCAGAGGGATTGAAGGAGAATAAAGTAAATGAAAGAGAGGTTATAGGAGCTTCTTTAGCAAATTCATTCCCTTC AGTTTTGTCCCATACATTCACATTTTTTATTCCAGTTGTTGTTCCAATTTTAGGACATACAGGAGTTTTATATGTCTTGA TAAGGTTGGGGGTAGCTTTAGCAAAGACAATAATTGGATTTTTATATTTATCAATTATATCAGAGGATTATTCCTTTGAG ATGCCAGAGATAAATAAATTAAACAAAAAGGAGAATGCAAAGAAATCATTTAAAAGCACTATTAGATTTGCCAAGAGATT AATACCAATAATGTTTTTTATGATGACATTGGTTCTCTATTTGTCTAAAATTGGATTTTTTGATTATGTTGAGAAATTTG TTCAACCAATAACAAACTTGCTAAATTTAAATCCCAACGTTGGCATTTTGGCATTGACAGAGATTATGAATGTGCAGGCA GCTATAGTTATGGCTGGTGGATTTTTAAATGAGGGAATTTTGAGCTCAAAAGAGGTTTTAATTGGTTTGATTATTGGGAA TGTTTTGACATTCTCAACAAGATATGTTAAGCATTCCTTACCTTTGCATGTTTCTCTATTTGGAGCTAAGTTAGGGACTA AAATAGTTATGGTTAATGCAGCAATCACTTTGTTGTTGGATATCTTTATAATAGCGGGGCTTTTATTAATTTAA
Upstream 100 bases:
>100_bases GTGTTCATGAATTACACACATATAAATTTCCCCCAAATGTGTATTTATATTTTTTGATATTTTTTGAATTGAGAATTGAA TGTTATTTTAATAATATTAG
Downstream 100 bases:
>100_bases TGTATTTTAAATAAAAATAAACCAAAAGATTTAATTAATTTTATTTGATTTTGTAATAGTATTTTAAATCATCGTCTCCT CCAAACAACTCTGGGTGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MIVVDYITPLMESMKISAYYTIRISIIVLTTVFIVNYIMSTGIMKKLSNMLSPILRRLKVNPLSISSTLACFFSPTVGYS ILAEGLKENKVNEREVIGASLANSFPSVLSHTFTFFIPVVVPILGHTGVLYVLIRLGVALAKTIIGFLYLSIISEDYSFE MPEINKLNKKENAKKSFKSTIRFAKRLIPIMFFMMTLVLYLSKIGFFDYVEKFVQPITNLLNLNPNVGILALTEIMNVQA AIVMAGGFLNEGILSSKEVLIGLIIGNVLTFSTRYVKHSLPLHVSLFGAKLGTKIVMVNAAITLLLDIFIIAGLLLI
Sequences:
>Translated_317_residues MIVVDYITPLMESMKISAYYTIRISIIVLTTVFIVNYIMSTGIMKKLSNMLSPILRRLKVNPLSISSTLACFFSPTVGYS ILAEGLKENKVNEREVIGASLANSFPSVLSHTFTFFIPVVVPILGHTGVLYVLIRLGVALAKTIIGFLYLSIISEDYSFE MPEINKLNKKENAKKSFKSTIRFAKRLIPIMFFMMTLVLYLSKIGFFDYVEKFVQPITNLLNLNPNVGILALTEIMNVQA AIVMAGGFLNEGILSSKEVLIGLIIGNVLTFSTRYVKHSLPLHVSLFGAKLGTKIVMVNAAITLLLDIFIIAGLLLI >Mature_317_residues MIVVDYITPLMESMKISAYYTIRISIIVLTTVFIVNYIMSTGIMKKLSNMLSPILRRLKVNPLSISSTLACFFSPTVGYS ILAEGLKENKVNEREVIGASLANSFPSVLSHTFTFFIPVVVPILGHTGVLYVLIRLGVALAKTIIGFLYLSIISEDYSFE MPEINKLNKKENAKKSFKSTIRFAKRLIPIMFFMMTLVLYLSKIGFFDYVEKFVQPITNLLNLNPNVGILALTEIMNVQA AIVMAGGFLNEGILSSKEVLIGLIIGNVLTFSTRYVKHSLPLHVSLFGAKLGTKIVMVNAAITLLLDIFIIAGLLLI
Specific function: Unknown
COG id: COG3366
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0880, MJ1556 and MJ1589
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y871_METJA (Q58281)
Other databases:
- EMBL: L77117 - PIR: G64408 - RefSeq: NP_247866.1 - ProteinModelPortal: Q58281 - GeneID: 1451760 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0871 - NMPDR: fig|243232.1.peg.903 - TIGR: MJ0871 - HOGENOM: HBG539135 - OMA: ANSFPSV - ProtClustDB: CLSK862773 - BioCyc: MJAN243232:MJ_0871-MONOMER - InterPro: IPR011642
Pfam domain/function: PF07670 Gate
EC number: NA
Molecular weight: Translated: 35129; Mature: 35129
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xd9cab2c)-; HASH(0xda2996c)-; HASH(0xd6631a8)-; HASH(0xd9a69d4)-; HASH(0xdb29a50)-; HASH(0xd4ca5f8)-; HASH(0xd2279c4)-;
Cys/Met content:
0.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVVDYITPLMESMKISAYYTIRISIIVLTTVFIVNYIMSTGIMKKLSNMLSPILRRLKV CEEHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NPLSISSTLACFFSPTVGYSILAEGLKENKVNEREVIGASLANSFPSVLSHTFTFFIPVV CCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPILGHTGVLYVLIRLGVALAKTIIGFLYLSIISEDYSFEMPEINKLNKKENAKKSFKST HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHH IRFAKRLIPIMFFMMTLVLYLSKIGFFDYVEKFVQPITNLLNLNPNVGILALTEIMNVQA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH AIVMAGGFLNEGILSSKEVLIGLIIGNVLTFSTRYVKHSLPLHVSLFGAKLGTKIVMVNA HHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCHHHHHHH AITLLLDIFIIAGLLLI HHHHHHHHHHHHHHHHH >Mature Secondary Structure MIVVDYITPLMESMKISAYYTIRISIIVLTTVFIVNYIMSTGIMKKLSNMLSPILRRLKV CEEHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NPLSISSTLACFFSPTVGYSILAEGLKENKVNEREVIGASLANSFPSVLSHTFTFFIPVV CCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPILGHTGVLYVLIRLGVALAKTIIGFLYLSIISEDYSFEMPEINKLNKKENAKKSFKST HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHH IRFAKRLIPIMFFMMTLVLYLSKIGFFDYVEKFVQPITNLLNLNPNVGILALTEIMNVQA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH AIVMAGGFLNEGILSSKEVLIGLIIGNVLTFSTRYVKHSLPLHVSLFGAKLGTKIVMVNA HHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCHHHHHHH AITLLLDIFIIAGLLLI HHHHHHHHHHHHHHHHH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087