| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is yleA [C]
Identifier: 15669058
GI number: 15669058
Start: 789986
End: 791269
Strand: Reverse
Name: yleA [C]
Synonym: MJ0867
Alternate gene names: 15669058
Gene position: 791269-789986 (Counterclockwise)
Preceding gene: 15669059
Following gene: 15669055
Centisome position: 47.52
GC content: 32.87
Gene sequence:
>1284_bases ATGTGGTTATATTATTTACAAGTGGTGATGGATATGAGAGTATATGTTGAGGGCTATGGATGCGTTTTAAACACCGCTGA TACAGAAATTATAAAGAATTCTCTAAAAAAACATGGATTTGAAGTAGTTAATAACTTAGAAGAGGCAGATATTGCAATAA TAAACACATGTGTTGTTAGATTAGAAACAGAGAATAGAATGATTTACAGAATAAACGAACTTAAAAATTTAGGAAAGGAG GTTGTTGTTGCTGGATGTTTGCCAAAGGCTTTAAAGAATAAGGTTAAAGGATTCCTACATATATATCCAAGAGAAGCTCA CAAAGCTGGAGAGATATTGAAAAATTACGTTGAAAAACACTACAGAATGCCATATATTGAAGAGGACATCAACAAAACAC TCTATAAGAAGTTAGATTACTTAAAACCATCATTAATTACTCCATTGCCAATATGTGAAGGTTGTATAGGAAACTGCAGT TACTGCATTGTGAAAATAGCAAGAGGTGGGCTAATATCTTATCCAAGAGAAAAAATCGTTAATAAAGCCAAAGAGTTAAT AAATAAAGGAGCTAAATGCTTGTTGATAACTGCACAAGATACTGCATGCTATGGATTTGATATTGGAGATAACTTAGCTA ACCTATTGAATGAGCTAACTCAAATAAAGGGAGAGTTTATAATGAGAGTTGGAATGATGCATGCTAAAAATGCTGAACTA ATCTTAGATGAACTTATAGAAGTCTATCAAAATGAGAAAGTTGGAAAATTTCTACATTTGCCTTTACAAAGTGGAGACGA TGAGATTTTAAAGAGAATGAAGAGAGGTTATACAGTAGATGAATTTAAAGACATTGTAAATGAATTCAGAAGGAAAATTA AAAATCTCTGCTTTACAACAGATATAATCGTTGGATTCCCCGGAGAGACAGAGGAGCAGTTTCAAAATACCTTAGAGGTT TTGAGGGAGTTAAAGCCAGACTATATTCACGGAGCTAAATACTCTCAAAGAAAAGGAACTGAGGCAGCAAAGATGAAGCA GATAGATACAAAAATTAGAAAGAGAAGAAGTGAAATTTTAGATAAATTGAGGAGGGAGTTGAGCTATCTAAATAACAAAA AGTATATTGGAAAGGCTATGAAAGTTTTAGTTTTAGATGAGGGAAAAGGTTATACTGACAACTTTAAAGTTGTTAAATTT GAAGGAGGGGAGGTAGGAGAGTTTAGAAAAGTGAAAATTACTGATGCTAAGACGTTTGGATTGAAAGGGGAGCTTATCCT TTAA
Upstream 100 bases:
>100_bases TTTGATTGAGTAAGTTTATAAACTCTAACTTGCTATTGCTATTTTATTTTCTATTTCTTATTTGGTTATTATTAAATAAT GCACAACATAAAATTTAAAT
Downstream 100 bases:
>100_bases TTTCCTTTAAAACCTCATCTAAATCAACGTTTTTAACCTCTCCAAATTTAACAACCTCTCCGTCTCCTTCATACCTTGGA ATGATATGGAAATGAACATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MWLYYLQVVMDMRVYVEGYGCVLNTADTEIIKNSLKKHGFEVVNNLEEADIAIINTCVVRLETENRMIYRINELKNLGKE VVVAGCLPKALKNKVKGFLHIYPREAHKAGEILKNYVEKHYRMPYIEEDINKTLYKKLDYLKPSLITPLPICEGCIGNCS YCIVKIARGGLISYPREKIVNKAKELINKGAKCLLITAQDTACYGFDIGDNLANLLNELTQIKGEFIMRVGMMHAKNAEL ILDELIEVYQNEKVGKFLHLPLQSGDDEILKRMKRGYTVDEFKDIVNEFRRKIKNLCFTTDIIVGFPGETEEQFQNTLEV LRELKPDYIHGAKYSQRKGTEAAKMKQIDTKIRKRRSEILDKLRRELSYLNNKKYIGKAMKVLVLDEGKGYTDNFKVVKF EGGEVGEFRKVKITDAKTFGLKGELIL
Sequences:
>Translated_427_residues MWLYYLQVVMDMRVYVEGYGCVLNTADTEIIKNSLKKHGFEVVNNLEEADIAIINTCVVRLETENRMIYRINELKNLGKE VVVAGCLPKALKNKVKGFLHIYPREAHKAGEILKNYVEKHYRMPYIEEDINKTLYKKLDYLKPSLITPLPICEGCIGNCS YCIVKIARGGLISYPREKIVNKAKELINKGAKCLLITAQDTACYGFDIGDNLANLLNELTQIKGEFIMRVGMMHAKNAEL ILDELIEVYQNEKVGKFLHLPLQSGDDEILKRMKRGYTVDEFKDIVNEFRRKIKNLCFTTDIIVGFPGETEEQFQNTLEV LRELKPDYIHGAKYSQRKGTEAAKMKQIDTKIRKRRSEILDKLRRELSYLNNKKYIGKAMKVLVLDEGKGYTDNFKVVKF EGGEVGEFRKVKITDAKTFGLKGELIL >Mature_427_residues MWLYYLQVVMDMRVYVEGYGCVLNTADTEIIKNSLKKHGFEVVNNLEEADIAIINTCVVRLETENRMIYRINELKNLGKE VVVAGCLPKALKNKVKGFLHIYPREAHKAGEILKNYVEKHYRMPYIEEDINKTLYKKLDYLKPSLITPLPICEGCIGNCS YCIVKIARGGLISYPREKIVNKAKELINKGAKCLLITAQDTACYGFDIGDNLANLLNELTQIKGEFIMRVGMMHAKNAEL ILDELIEVYQNEKVGKFLHLPLQSGDDEILKRMKRGYTVDEFKDIVNEFRRKIKNLCFTTDIIVGFPGETEEQFQNTLEV LRELKPDYIHGAKYSQRKGTEAAKMKQIDTKIRKRRSEILDKLRRELSYLNNKKYIGKAMKVLVLDEGKGYTDNFKVVKF EGGEVGEFRKVKITDAKTFGLKGELIL
Specific function: Unknown
COG id: COG0621
COG function: function code J; 2-methylthioadenine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 TRAM domain
Homologues:
Organism=Homo sapiens, GI93277076, Length=384, Percent_Identity=32.5520833333333, Blast_Score=219, Evalue=3e-57, Organism=Homo sapiens, GI28872782, Length=481, Percent_Identity=27.2349272349272, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI28872784, Length=481, Percent_Identity=27.2349272349272, Blast_Score=152, Evalue=7e-37, Organism=Escherichia coli, GI1786882, Length=447, Percent_Identity=28.1879194630872, Blast_Score=175, Evalue=5e-45, Organism=Escherichia coli, GI1787057, Length=445, Percent_Identity=27.8651685393258, Blast_Score=157, Evalue=1e-39, Organism=Caenorhabditis elegans, GI71996771, Length=293, Percent_Identity=34.8122866894198, Blast_Score=170, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17553146, Length=468, Percent_Identity=28.4188034188034, Blast_Score=156, Evalue=2e-38, Organism=Drosophila melanogaster, GI19922432, Length=433, Percent_Identity=30.4849884526559, Blast_Score=202, Evalue=3e-52, Organism=Drosophila melanogaster, GI21356207, Length=481, Percent_Identity=28.0665280665281, Blast_Score=150, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y867_METJA (Q58277)
Other databases:
- EMBL: L77117 - PIR: C64408 - RefSeq: NP_247862.1 - ProteinModelPortal: Q58277 - SMR: Q58277 - GeneID: 1451756 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0867 - NMPDR: fig|243232.1.peg.899 - TIGR: MJ0867 - HOGENOM: HBG457663 - OMA: GCYGFDI - ProtClustDB: CLSK876369 - BioCyc: MJAN243232:MJ_0867-MONOMER - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR020612 - InterPro: IPR013848 - InterPro: IPR006466 - InterPro: IPR007197 - InterPro: IPR002792 - PANTHER: PTHR11918 - SMART: SM00729 - TIGRFAMs: TIGR01578 - TIGRFAMs: TIGR00089
Pfam domain/function: PF04055 Radical_SAM; PF01938 TRAM; PF00919 UPF0004
EC number: NA
Molecular weight: Translated: 49091; Mature: 49091
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: PS51449 MTTASE_N; PS01278 MTTASE_RADICAL; PS50926 TRAM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWLYYLQVVMDMRVYVEGYGCVLNTADTEIIKNSLKKHGFEVVNNLEEADIAIINTCVVR CHHHHHHHHHHHHHHEEECCEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHEEEHEEEE LETENRMIYRINELKNLGKEVVVAGCLPKALKNKVKGFLHIYPREAHKAGEILKNYVEKH EECCCCEEEEEHHHHHCHHHHHHHHCCHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHH YRMPYIEEDINKTLYKKLDYLKPSLITPLPICEGCIGNCSYCIVKIARGGLISYPREKIV CCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHH NKAKELINKGAKCLLITAQDTACYGFDIGDNLANLLNELTQIKGEFIMRVGMMHAKNAEL HHHHHHHHCCCEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH ILDELIEVYQNEKVGKFLHLPLQSGDDEILKRMKRGYTVDEFKDIVNEFRRKIKNLCFTT HHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH DIIVGFPGETEEQFQNTLEVLRELKPDYIHGAKYSQRKGTEAAKMKQIDTKIRKRRSEIL HEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH DKLRRELSYLNNKKYIGKAMKVLVLDEGKGYTDNFKVVKFEGGEVGEFRKVKITDAKTFG HHHHHHHHHHCCHHHHHHHEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEECCCEEC LKGELIL CCCCEEC >Mature Secondary Structure MWLYYLQVVMDMRVYVEGYGCVLNTADTEIIKNSLKKHGFEVVNNLEEADIAIINTCVVR CHHHHHHHHHHHHHHEEECCEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHEEEHEEEE LETENRMIYRINELKNLGKEVVVAGCLPKALKNKVKGFLHIYPREAHKAGEILKNYVEKH EECCCCEEEEEHHHHHCHHHHHHHHCCHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHH YRMPYIEEDINKTLYKKLDYLKPSLITPLPICEGCIGNCSYCIVKIARGGLISYPREKIV CCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHH NKAKELINKGAKCLLITAQDTACYGFDIGDNLANLLNELTQIKGEFIMRVGMMHAKNAEL HHHHHHHHCCCEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH ILDELIEVYQNEKVGKFLHLPLQSGDDEILKRMKRGYTVDEFKDIVNEFRRKIKNLCFTT HHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH DIIVGFPGETEEQFQNTLEVLRELKPDYIHGAKYSQRKGTEAAKMKQIDTKIRKRRSEIL HEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH DKLRRELSYLNNKKYIGKAMKVLVLDEGKGYTDNFKVVKFEGGEVGEFRKVKITDAKTFG HHHHHHHHHHCCHHHHHHHEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEECCCEEC LKGELIL CCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087