| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669047
Identifier: 15669047
GI number: 15669047
Start: 780616
End: 780945
Strand: Reverse
Name: 15669047
Synonym: MJ0856.1
Alternate gene names: NA
Gene position: 780945-780616 (Counterclockwise)
Preceding gene: 15669048
Following gene: 15669046
Centisome position: 46.9
GC content: 38.48
Gene sequence:
>330_bases TTGCATAACATCTCAGCTAAAAAATTCTTAGGTTATTTAAAAAATAAATGCTTAGAATTTGGCGTTAAAGTTATTGAAGG AAATCCGGCTTACACTTCGATAAAATGTCCTAATTGTGGGAGTAGATTATCTCAACTGTATAAATTAGCCGATGAGAGGG CTCTGCCTTCGAGGCTAATGTATTGCTTTGATTGCGGATTTTATGCTGATAGGGATACTGTAGCTGTATTTAATTTGATA AAGAGATTTACGGGGCTGTATCCGTTCAGCCCTAAGTCCAATGAACCCATAGCAGAGGGAACGGTGTTTCCCGATGAAGC TATGGGTTGA
Upstream 100 bases:
>100_bases AAAACTTAAAGAAAATAATGCAGTTTTAGTTATTGAAGACTTATCCCCTTATTTTAACCAAAATATTGCTAAAAAATCAT TTAAAAAACTAAAACATAAA
Downstream 100 bases:
>100_bases GGACAACCCGTTTCCATAGCTTACCGATTAGATACGATAAGTTATTATATGATAAGTTATTAAATGCTATGGTAAGCTAT GGAAATGGGGAACGGAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MHNISAKKFLGYLKNKCLEFGVKVIEGNPAYTSIKCPNCGSRLSQLYKLADERALPSRLMYCFDCGFYADRDTVAVFNLI KRFTGLYPFSPKSNEPIAEGTVFPDEAMG
Sequences:
>Translated_109_residues MHNISAKKFLGYLKNKCLEFGVKVIEGNPAYTSIKCPNCGSRLSQLYKLADERALPSRLMYCFDCGFYADRDTVAVFNLI KRFTGLYPFSPKSNEPIAEGTVFPDEAMG >Mature_109_residues MHNISAKKFLGYLKNKCLEFGVKVIEGNPAYTSIKCPNCGSRLSQLYKLADERALPSRLMYCFDCGFYADRDTVAVFNLI KRFTGLYPFSPKSNEPIAEGTVFPDEAMG
Specific function: Unknown
COG id: COG0675
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 35 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y85A_METJA (P81315)
Other databases:
- EMBL: L77117 - RefSeq: NP_247851.1 - ProteinModelPortal: P81315 - GeneID: 1451745 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0856.1 - NMPDR: fig|243232.1.peg.888 - TIGR: MJ0856.1 - BioCyc: MJAN243232:MJ_0856.1-MONOMER - GO: GO:0032196 - InterPro: IPR010095
Pfam domain/function: PF07282 Transposase_35
EC number: NA
Molecular weight: Translated: 12230; Mature: 12230
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNISAKKFLGYLKNKCLEFGVKVIEGNPAYTSIKCPNCGSRLSQLYKLADERALPSRLM CCCCHHHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHH YCFDCGFYADRDTVAVFNLIKRFTGLYPFSPKSNEPIAEGTVFPDEAMG HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHNISAKKFLGYLKNKCLEFGVKVIEGNPAYTSIKCPNCGSRLSQLYKLADERALPSRLM CCCCHHHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHH YCFDCGFYADRDTVAVFNLIKRFTGLYPFSPKSNEPIAEGTVFPDEAMG HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087