| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669027
Identifier: 15669027
GI number: 15669027
Start: 762859
End: 763608
Strand: Direct
Name: 15669027
Synonym: MJ0837
Alternate gene names: NA
Gene position: 762859-763608 (Clockwise)
Preceding gene: 15669019
Following gene: 15669028
Centisome position: 45.82
GC content: 31.6
Gene sequence:
>750_bases ATGGAGAGGTTAATAAAATTGGCGGAACAAATAAAGGATGAAGAATTAAGAAAAAAGGTTATTGAATTTTTAAAAAATCC TAAAGCAACACATCCAGGAATTGTAGATACTGGAATAAGTGTCGAAGAAGCTCCAGCAAGTATAAATTGGCATCATAGAT ATGAAGGTGGGTTAATAGAACATACAATATCAGTAACAAAAATAGCTCTAAAAATGGCTGATGTTTTGGAAGAAGTTTAC GGTGTTGAAGTTAATAGAGATTATATAATCGCTGGAGCTTTATTACATGATATTATGAAGCCATACAACTATATAAGAAA AGAAGATGGCACTTTTGACCACTACGATATGTTCAATTTAGACCACTTAACATTAGCTGTTGCGGAGCTCTACAAAAGAG ATTTTCCAATTGAGGTTATTAAAATAGTTGCTTCCCATCATGGAGACCATTCTCCAACAAGGCCAAACTCTATAGAGGCA TATATTGTCCATTATGCTGATGAAGCAGATTCAAAGATTAATGATGTAGCTGTTAGAGTTTGTCAAGCAAGAAGTAGGGA TTTAGGAATCTCTGAACAGGAGATATATAAAGCAGTAAATCCTTTGAAGGTTTATGAAGTTAGAAGTAGAGAAGGAAAGC TAAAAACTATAGAATTTTTAAAAGACATTTTAAAATCAATAGGTATAATTTCTGAAGATGAGAAAAAAGATGAAAATAAT GAAAGTTTAGAAAATAAAGAATCCAATTAA
Upstream 100 bases:
>100_bases TAGATGATTTTTAGCTAATTCTATCATTATACAACACCTTTAAATAGATTAAATATTATTTTTACTTTTAGATGTATTTA AAATTTAGGGAGGGATTTTA
Downstream 100 bases:
>100_bases ATCTAATCAATTTATATATTTGGTTTTATTAATATAATGTCATAAAATAAAAAATGAAACTTTTGTTTTGTGATTAAATA AAATTGCGTATTAATTTACA
Product: cmp-binding-factor 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MERLIKLAEQIKDEELRKKVIEFLKNPKATHPGIVDTGISVEEAPASINWHHRYEGGLIEHTISVTKIALKMADVLEEVY GVEVNRDYIIAGALLHDIMKPYNYIRKEDGTFDHYDMFNLDHLTLAVAELYKRDFPIEVIKIVASHHGDHSPTRPNSIEA YIVHYADEADSKINDVAVRVCQARSRDLGISEQEIYKAVNPLKVYEVRSREGKLKTIEFLKDILKSIGIISEDEKKDENN ESLENKESN
Sequences:
>Translated_249_residues MERLIKLAEQIKDEELRKKVIEFLKNPKATHPGIVDTGISVEEAPASINWHHRYEGGLIEHTISVTKIALKMADVLEEVY GVEVNRDYIIAGALLHDIMKPYNYIRKEDGTFDHYDMFNLDHLTLAVAELYKRDFPIEVIKIVASHHGDHSPTRPNSIEA YIVHYADEADSKINDVAVRVCQARSRDLGISEQEIYKAVNPLKVYEVRSREGKLKTIEFLKDILKSIGIISEDEKKDENN ESLENKESN >Mature_249_residues MERLIKLAEQIKDEELRKKVIEFLKNPKATHPGIVDTGISVEEAPASINWHHRYEGGLIEHTISVTKIALKMADVLEEVY GVEVNRDYIIAGALLHDIMKPYNYIRKEDGTFDHYDMFNLDHLTLAVAELYKRDFPIEVIKIVASHHGDHSPTRPNSIEA YIVHYADEADSKINDVAVRVCQARSRDLGISEQEIYKAVNPLKVYEVRSREGKLKTIEFLKDILKSIGIISEDEKKDENN ESLENKESN
Specific function: Unknown
COG id: COG3481
COG function: function code R; Predicted HD-superfamily hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y837_METJA (Q58247)
Other databases:
- EMBL: L77117 - PIR: E64404 - RefSeq: NP_247831.1 - ProteinModelPortal: Q58247 - SMR: Q58247 - GeneID: 1451723 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0837 - NMPDR: fig|243232.1.peg.868 - TIGR: MJ0837 - HOGENOM: HBG507917 - OMA: GGLIEHT - ProtClustDB: CLSK876358 - BioCyc: MJAN243232:MJ_0837-MONOMER - InterPro: IPR003607 - InterPro: IPR006675 - SMART: SM00471 - TIGRFAMs: TIGR00277
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28524; Mature: 28524
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERLIKLAEQIKDEELRKKVIEFLKNPKATHPGIVDTGISVEEAPASINWHHRYEGGLIE CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHH HTISVTKIALKMADVLEEVYGVEVNRDYIIAGALLHDIMKPYNYIRKEDGTFDHYDMFNL HHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH DHLTLAVAELYKRDFPIEVIKIVASHHGDHSPTRPNSIEAYIVHYADEADSKINDVAVRV HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH CQARSRDLGISEQEIYKAVNPLKVYEVRSREGKLKTIEFLKDILKSIGIISEDEKKDENN HHHHCCCCCCCHHHHHHHCCCHHEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC ESLENKESN HHHHCCCCC >Mature Secondary Structure MERLIKLAEQIKDEELRKKVIEFLKNPKATHPGIVDTGISVEEAPASINWHHRYEGGLIE CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHH HTISVTKIALKMADVLEEVYGVEVNRDYIIAGALLHDIMKPYNYIRKEDGTFDHYDMFNL HHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH DHLTLAVAELYKRDFPIEVIKIVASHHGDHSPTRPNSIEAYIVHYADEADSKINDVAVRV HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH CQARSRDLGISEQEIYKAVNPLKVYEVRSREGKLKTIEFLKDILKSIGIISEDEKKDENN HHHHCCCCCCCHHHHHHHCCCHHEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC ESLENKESN HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087