Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15669023

Identifier: 15669023

GI number: 15669023

Start: 759818

End: 760951

Strand: Reverse

Name: 15669023

Synonym: MJ0835

Alternate gene names: NA

Gene position: 760951-759818 (Counterclockwise)

Preceding gene: 15669024

Following gene: 15669022

Centisome position: 45.7

GC content: 28.04

Gene sequence:

>1134_bases
ATGGTAGATACTTCAAAAATTAAAGCATTAAAAGAGAAAAGTAGAAGAACGGTGAAATCTGGTTCATTAAAATTTATATT
GATAATACTGGTTGTTGTAATTGTTGGGTTATTAGCATTTATCGCATATAATGAAATCAGTAACCTACAGTTTCAAGAAA
AAATAACGCTTGAAAACCAGAAAAAAGCAGCTATTGAATCAATAAATCAGATGTTTGCCAAATACCCTAACGACCCACAA
AAACTAATATATATAAACAAAATCCAAATGGCGAATAATATTGAAGAAATTAACGAAGTGTTGGAAGAAGCTAAAAAGTA
CATTAGCTTTAAAAATTATAAAATTGAGGCTATTAACCAAATAAAAAGTATGTATGGGGAATATTATTCTCTAAGTTTAT
CTGCTCAGGAATTAGTGCATAAAATAAGCTTGGCACAATCTACTGAAGAGATTGAAAATCTATTAAAGTCTGTTGATATA
GAAAAAGACATTAGGAGCATCATAGAAAAGCAGATTGATTATGTTTTAGCCTCAGGAGATAAATATTATTATGTAGAAAT
TAATGGAAAATCCATGTTTATGACAAGAGATGAAATTCTTAAATATAAAAAATTCTGGACATTATCCGAACTCAAATCTC
TAAAAATAACTCCAGTATCACAATTAAATAAAGTAGCAATTGAAATATCTGCAAAACAGTGTGGTAAGTTACCACATAAA
GGAGATATAATTTCAATATACAGTAAAGACGGTTCGTTCATAACATATGGTATCATAGATTCATCCTATGTAATTTTATC
CTCTATAAGTTACAGTGAAAGTAAATCAACATCAAGTAATATAAATGAGCTTGGAGAATCTTACTCCTCATCTTCCTCTT
CAAGTATATCTTACTCATTAAATAACCTTCCAGGCATATTACATGCAACAGTCATAGACAGACTCGATTACGATAAAATA
AAAAAGATGTTTGGAGAATATGGAAAAAAATTAAATGAAATTGAAGATGATACTCAAATATTCGATGAAAATGTTAATTA
TTTCTTAATTATCTCAATTCCTGATGATAAAATTCCTGACATAATACAAATAGACCCTAAAGATATAGTTATTGTAATAA
AGTCCAAAGAATAA

Upstream 100 bases:

>100_bases
CACAAAAATAAACCAAAGTGAATATAATATAACCGTAAATCCATAATAGGCCATGATAACAAACCATATAATTTTGTAAT
ATTAAAGTTAGGGTGATTGT

Downstream 100 bases:

>100_bases
GTCCAGGGATTTGAGTTAAGGGATGTTTATGGATTATAAATATTTTTTTATAACCATTATCCTAATTTCCATATTTTGTG
GATGTTACGAAAAATCATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MVDTSKIKALKEKSRRTVKSGSLKFILIILVVVIVGLLAFIAYNEISNLQFQEKITLENQKKAAIESINQMFAKYPNDPQ
KLIYINKIQMANNIEEINEVLEEAKKYISFKNYKIEAINQIKSMYGEYYSLSLSAQELVHKISLAQSTEEIENLLKSVDI
EKDIRSIIEKQIDYVLASGDKYYYVEINGKSMFMTRDEILKYKKFWTLSELKSLKITPVSQLNKVAIEISAKQCGKLPHK
GDIISIYSKDGSFITYGIIDSSYVILSSISYSESKSTSSNINELGESYSSSSSSSISYSLNNLPGILHATVIDRLDYDKI
KKMFGEYGKKLNEIEDDTQIFDENVNYFLIISIPDDKIPDIIQIDPKDIVIVIKSKE

Sequences:

>Translated_377_residues
MVDTSKIKALKEKSRRTVKSGSLKFILIILVVVIVGLLAFIAYNEISNLQFQEKITLENQKKAAIESINQMFAKYPNDPQ
KLIYINKIQMANNIEEINEVLEEAKKYISFKNYKIEAINQIKSMYGEYYSLSLSAQELVHKISLAQSTEEIENLLKSVDI
EKDIRSIIEKQIDYVLASGDKYYYVEINGKSMFMTRDEILKYKKFWTLSELKSLKITPVSQLNKVAIEISAKQCGKLPHK
GDIISIYSKDGSFITYGIIDSSYVILSSISYSESKSTSSNINELGESYSSSSSSSISYSLNNLPGILHATVIDRLDYDKI
KKMFGEYGKKLNEIEDDTQIFDENVNYFLIISIPDDKIPDIIQIDPKDIVIVIKSKE
>Mature_377_residues
MVDTSKIKALKEKSRRTVKSGSLKFILIILVVVIVGLLAFIAYNEISNLQFQEKITLENQKKAAIESINQMFAKYPNDPQ
KLIYINKIQMANNIEEINEVLEEAKKYISFKNYKIEAINQIKSMYGEYYSLSLSAQELVHKISLAQSTEEIENLLKSVDI
EKDIRSIIEKQIDYVLASGDKYYYVEINGKSMFMTRDEILKYKKFWTLSELKSLKITPVSQLNKVAIEISAKQCGKLPHK
GDIISIYSKDGSFITYGIIDSSYVILSSISYSESKSTSSNINELGESYSSSSSSSISYSLNNLPGILHATVIDRLDYDKI
KKMFGEYGKKLNEIEDDTQIFDENVNYFLIISIPDDKIPDIIQIDPKDIVIVIKSKE

Specific function: Unknown

COG id: COG1627

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y835_METJA (Q58245)

Other databases:

- EMBL:   L77117
- PIR:   C64404
- RefSeq:   NP_247827.1
- ProteinModelPortal:   Q58245
- GeneID:   1451719
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0835
- NMPDR:   fig|243232.1.peg.864
- TIGR:   MJ0835
- HOGENOM:   HBG541023
- OMA:   QIFDENV
- ProtClustDB:   CLSK876354
- BioCyc:   MJAN243232:MJ_0835-MONOMER
- InterPro:   IPR007509

Pfam domain/function: PF04415 DUF515

EC number: NA

Molecular weight: Translated: 42951; Mature: 42951

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd3ff70c)-; HASH(0xd65ce44)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDTSKIKALKEKSRRTVKSGSLKFILIILVVVIVGLLAFIAYNEISNLQFQEKITLENQ
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHCCCCCH
KKAAIESINQMFAKYPNDPQKLIYINKIQMANNIEEINEVLEEAKKYISFKNYKIEAINQ
HHHHHHHHHHHHHHCCCCCHHEEEEEEHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
IKSMYGEYYSLSLSAQELVHKISLAQSTEEIENLLKSVDIEKDIRSIIEKQIDYVLASGD
HHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEECCC
KYYYVEINGKSMFMTRDEILKYKKFWTLSELKSLKITPVSQLNKVAIEISAKQCGKLPHK
EEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHCEEEEEEEHHHHCCCCCC
GDIISIYSKDGSFITYGIIDSSYVILSSISYSESKSTSSNINELGESYSSSSSSSISYSL
CCEEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEC
NNLPGILHATVIDRLDYDKIKKMFGEYGKKLNEIEDDTQIFDENVNYFLIISIPDDKIPD
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCCC
IIQIDPKDIVIVIKSKE
EEEECCCCEEEEEECCH
>Mature Secondary Structure
MVDTSKIKALKEKSRRTVKSGSLKFILIILVVVIVGLLAFIAYNEISNLQFQEKITLENQ
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHCCCCCH
KKAAIESINQMFAKYPNDPQKLIYINKIQMANNIEEINEVLEEAKKYISFKNYKIEAINQ
HHHHHHHHHHHHHHCCCCCHHEEEEEEHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
IKSMYGEYYSLSLSAQELVHKISLAQSTEEIENLLKSVDIEKDIRSIIEKQIDYVLASGD
HHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEECCC
KYYYVEINGKSMFMTRDEILKYKKFWTLSELKSLKITPVSQLNKVAIEISAKQCGKLPHK
EEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHCEEEEEEEHHHHCCCCCC
GDIISIYSKDGSFITYGIIDSSYVILSSISYSESKSTSSNINELGESYSSSSSSSISYSL
CCEEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEC
NNLPGILHATVIDRLDYDKIKKMFGEYGKKLNEIEDDTQIFDENVNYFLIISIPDDKIPD
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCCC
IIQIDPKDIVIVIKSKE
EEEECCCCEEEEEECCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087