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The map label for this gene is ybbK [C]

Identifier: 15669014

GI number: 15669014

Start: 747864

End: 748463

Strand: Direct

Name: ybbK [C]

Synonym: MJ0827

Alternate gene names: 15669014

Gene position: 747864-748463 (Clockwise)

Preceding gene: 15669013

Following gene: 15669015

Centisome position: 44.92

GC content: 35.0

Gene sequence:

>600_bases
TTGAAGGTGAATGATATGTTTTGGTTTTGGCTAATATTAGGAATTATAGCATTATTTATAATTGTTAAAGCAATAGTTAT
AGTCAATCAATATGAGGGAGGATTAATCTTTAGATTGGGGAGGGTTATTGGAAAATTAAAGCCAGGGATAAATATAATAA
TTCCATTCTTAGATGTGCCTGTTAAGGTTGATATGAGGACGAGAGTTACCGATATCCCTCCTCAAGAGATGATTACAAAG
GATAATGCAGTTGTAAAAGTGGATGCGGTTGTTTATTATAGGGTTATAGATGTTGAAAAGGCAATTTTAGAAGTTGAGGA
TTACGAATATGCTATAATAAACTTAGCTCAAACCACATTGAGGGCAATAATTGGTAGTATGGAGTTAGATGAGGTTTTAA
ATAAAAGGGAGTATATAAACTCAAAGTTATTGGAAATTTTGGATAGAGAGACAGATGCATGGGGAGTTAGGATTGAAAAG
GTTGAAGTTAAAGAAATAGACCCACCAGAGGACATTAAAAATGCCATGGCTCAACAAATGAAGGCAGAGAGATTGAAGAG
AGCAGCAATATTAGAGGCAGAGGGAGAGAAGCCAGAGTAG

Upstream 100 bases:

>100_bases
GAGAACCAAATATGGTTAGCAAAGTCTAAAGATAAAATAAAGAATGGAGATAAAGTTGAGATTGTAGGAGTTGAAGGAGT
CTCACTAATAGTTAAAAAAG

Downstream 100 bases:

>100_bases
AATTTTAAGGGCAGAGGGTATTGCTGAGAGTTTGAGGATTGAAGCTGAAGGGCAGGCAAAGGCAATACAAATAGTAGCAG
AGGCAGCAAGACAATACTTT

Product: membrane protein regulator of cation conductance

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKVNDMFWFWLILGIIALFIIVKAIVIVNQYEGGLIFRLGRVIGKLKPGINIIIPFLDVPVKVDMRTRVTDIPPQEMITK
DNAVVKVDAVVYYRVIDVEKAILEVEDYEYAIINLAQTTLRAIIGSMELDEVLNKREYINSKLLEILDRETDAWGVRIEK
VEVKEIDPPEDIKNAMAQQMKAERLKRAAILEAEGEKPE

Sequences:

>Translated_199_residues
MKVNDMFWFWLILGIIALFIIVKAIVIVNQYEGGLIFRLGRVIGKLKPGINIIIPFLDVPVKVDMRTRVTDIPPQEMITK
DNAVVKVDAVVYYRVIDVEKAILEVEDYEYAIINLAQTTLRAIIGSMELDEVLNKREYINSKLLEILDRETDAWGVRIEK
VEVKEIDPPEDIKNAMAQQMKAERLKRAAILEAEGEKPE
>Mature_199_residues
MKVNDMFWFWLILGIIALFIIVKAIVIVNQYEGGLIFRLGRVIGKLKPGINIIIPFLDVPVKVDMRTRVTDIPPQEMITK
DNAVVKVDAVVYYRVIDVEKAILEVEDYEYAIINLAQTTLRAIIGSMELDEVLNKREYINSKLLEILDRETDAWGVRIEK
VEVKEIDPPEDIKNAMAQQMKAERLKRAAILEAEGEKPE

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family

Homologues:

Organism=Homo sapiens, GI38016911, Length=196, Percent_Identity=40.8163265306122, Blast_Score=141, Evalue=3e-34,
Organism=Homo sapiens, GI21686995, Length=196, Percent_Identity=38.7755102040816, Blast_Score=139, Evalue=2e-33,
Organism=Homo sapiens, GI221316744, Length=196, Percent_Identity=38.7755102040816, Blast_Score=138, Evalue=2e-33,
Organism=Homo sapiens, GI7305503, Length=174, Percent_Identity=39.0804597701149, Blast_Score=138, Evalue=3e-33,
Organism=Homo sapiens, GI7657615, Length=184, Percent_Identity=32.0652173913043, Blast_Score=107, Evalue=9e-24,
Organism=Homo sapiens, GI20149563, Length=168, Percent_Identity=31.547619047619, Blast_Score=90, Evalue=2e-18,
Organism=Escherichia coli, GI1786697, Length=191, Percent_Identity=46.0732984293194, Blast_Score=177, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI32566490, Length=200, Percent_Identity=37.5, Blast_Score=139, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI17569493, Length=182, Percent_Identity=37.9120879120879, Blast_Score=137, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI193209764, Length=182, Percent_Identity=37.9120879120879, Blast_Score=136, Evalue=6e-33,
Organism=Caenorhabditis elegans, GI25153583, Length=197, Percent_Identity=40.6091370558376, Blast_Score=134, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI71987612, Length=197, Percent_Identity=40.6091370558376, Blast_Score=134, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI71987621, Length=197, Percent_Identity=40.6091370558376, Blast_Score=134, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17569497, Length=192, Percent_Identity=37.5, Blast_Score=134, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI17569499, Length=205, Percent_Identity=38.5365853658537, Blast_Score=130, Evalue=4e-31,
Organism=Caenorhabditis elegans, GI71989948, Length=183, Percent_Identity=40.9836065573771, Blast_Score=127, Evalue=5e-30,
Organism=Caenorhabditis elegans, GI71989955, Length=183, Percent_Identity=40.9836065573771, Blast_Score=126, Evalue=6e-30,
Organism=Caenorhabditis elegans, GI17570161, Length=190, Percent_Identity=40, Blast_Score=126, Evalue=8e-30,
Organism=Caenorhabditis elegans, GI193210507, Length=190, Percent_Identity=40, Blast_Score=126, Evalue=9e-30,
Organism=Caenorhabditis elegans, GI17570459, Length=192, Percent_Identity=40.625, Blast_Score=125, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI32564147, Length=175, Percent_Identity=37.1428571428571, Blast_Score=120, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI71989963, Length=127, Percent_Identity=39.3700787401575, Blast_Score=98, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17542664, Length=165, Percent_Identity=28.4848484848485, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281365664, Length=184, Percent_Identity=44.0217391304348, Blast_Score=146, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24657857, Length=184, Percent_Identity=44.0217391304348, Blast_Score=145, Evalue=1e-35,
Organism=Drosophila melanogaster, GI62484448, Length=184, Percent_Identity=44.0217391304348, Blast_Score=145, Evalue=1e-35,
Organism=Drosophila melanogaster, GI62484274, Length=184, Percent_Identity=44.0217391304348, Blast_Score=144, Evalue=3e-35,
Organism=Drosophila melanogaster, GI18860517, Length=189, Percent_Identity=44.4444444444444, Blast_Score=142, Evalue=1e-34,
Organism=Drosophila melanogaster, GI45556022, Length=183, Percent_Identity=42.6229508196721, Blast_Score=140, Evalue=5e-34,
Organism=Drosophila melanogaster, GI45550506, Length=173, Percent_Identity=39.3063583815029, Blast_Score=135, Evalue=2e-32,
Organism=Drosophila melanogaster, GI21356845, Length=191, Percent_Identity=36.1256544502618, Blast_Score=134, Evalue=3e-32,
Organism=Drosophila melanogaster, GI28573263, Length=195, Percent_Identity=35.8974358974359, Blast_Score=127, Evalue=4e-30,
Organism=Drosophila melanogaster, GI281361631, Length=188, Percent_Identity=36.7021276595745, Blast_Score=125, Evalue=2e-29,
Organism=Drosophila melanogaster, GI281361633, Length=188, Percent_Identity=36.7021276595745, Blast_Score=125, Evalue=2e-29,
Organism=Drosophila melanogaster, GI281361635, Length=132, Percent_Identity=37.8787878787879, Blast_Score=92, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y827_METJA (Q58237)

Other databases:

- EMBL:   L77117
- PIR:   C64403
- RefSeq:   NP_247818.1
- ProteinModelPortal:   Q58237
- GeneID:   1451710
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0827
- NMPDR:   fig|243232.1.peg.855
- TIGR:   MJ0827
- HOGENOM:   HBG714701
- OMA:   ANDCILL
- ProtClustDB:   CLSK876349
- BioCyc:   MJAN243232:MJ_0827-MONOMER
- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972
- PANTHER:   PTHR10264
- PRINTS:   PR00721
- SMART:   SM00244

Pfam domain/function: PF01145 Band_7

EC number: NA

Molecular weight: Translated: 22809; Mature: 22809

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS01270 BAND_7

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd8e2258)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVNDMFWFWLILGIIALFIIVKAIVIVNQYEGGLIFRLGRVIGKLKPGINIIIPFLDVP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCC
VKVDMRTRVTDIPPQEMITKDNAVVKVDAVVYYRVIDVEKAILEVEDYEYAIINLAQTTL
EEECCCCCCCCCCHHHHHCCCCCEEEEHHEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHH
RAIIGSMELDEVLNKREYINSKLLEILDRETDAWGVRIEKVEVKEIDPPEDIKNAMAQQM
HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH
KAERLKRAAILEAEGEKPE
HHHHHHHHHHHCCCCCCCH
>Mature Secondary Structure
MKVNDMFWFWLILGIIALFIIVKAIVIVNQYEGGLIFRLGRVIGKLKPGINIIIPFLDVP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCC
VKVDMRTRVTDIPPQEMITKDNAVVKVDAVVYYRVIDVEKAILEVEDYEYAIINLAQTTL
EEECCCCCCCCCCHHHHHCCCCCEEEEHHEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHH
RAIIGSMELDEVLNKREYINSKLLEILDRETDAWGVRIEKVEVKEIDPPEDIKNAMAQQM
HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH
KAERLKRAAILEAEGEKPE
HHHHHHHHHHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087