| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668984
Identifier: 15668984
GI number: 15668984
Start: 721778
End: 722782
Strand: Direct
Name: 15668984
Synonym: MJ0798
Alternate gene names: NA
Gene position: 721778-722782 (Clockwise)
Preceding gene: 15668983
Following gene: 15668985
Centisome position: 43.35
GC content: 24.28
Gene sequence:
>1005_bases ATGGCGATTAAAATGGACAAAAACTTCACATTAGAAATTTTAAACTTATTGAAAAATAATGTTTTAAAAAATAGGTTAAA GATTGGGAAAGAACTTACAGAAATGCTTATTGATGAGATTGATAAGCTAATAGAAACTGCTAATGAAATTTCAGAAGAAA TATCAAAAAATAGTCCAAATAATTCGAGTTTGTATGATTTAAGGTTGATATATAATAAGTTATCAACTCTTTATGAAGAT ATTGATAAATTATTGGGTGAAATAGAGTGTATTTTAAGTTTAAGCAATAAAGATATTAAAAACTGGAAACTTTGGAAAAA CCTTGGAGATAAAGCATATCTATGGAAAGCTTATTATGAAGCATTATTTTGTTACAACAAAGCATTAGAGTTAAATCAAA ATACAGAACTTCTATGTAAAAAGGGCTATGCTTTATTAAAACTATATAAAAGAGATTTAGCAATAAAATATTTTGAAAAG GCATCGGAAAAAGATAGAAATAACTATAAAGCACTTTTTGGATTGGGAAAGAGCTATTATTTAATGAGTGATAATAAAAA TTCAATAAAATACTTTGAAAAAGTTTTAGAATTAAATCCAAATGATGTAGAAGCATTGGAATATTTGGGAGAGTTATATT ATGAAGAAGATTGTGAAAAAGCGATAAACTACTTTAAAAAAGCTTTAGAATTAAAACCAGATGATATTGATTTAATTTTA AAAGTTGCCTTTACATACTTCAAATTGAAGAAATATAAACATGCACTAAAATATTTTGAGAAAGCTTTAAAATTAAATCC AAATGTGTTTGAATTAGAACAGATTTATGAATCTATGGGAAGAATATACATTTATTTAGGAGAAGATGAGAAAGCAATAG AATGTTTTGAAAAATTAAAGGAAATAAACCTTTATCATTATGAAATATATGAAATTATTGCTTTAACTTATGAAGAGGTT GGAAATATTGAAAAAGCTAAAGAATTTTATAAAAAGTTGGTGTGA
Upstream 100 bases:
>100_bases ATTTTAACATCTCTGATTTCAGCATTATATCCAGCATATAAAGCATCAAAATTAGACCCAATAAAGTCATTGAGAAATGA ATAATAAATAATAATAAATT
Downstream 100 bases:
>100_bases AAATGGAAAATTTTGAATACGAGCTAAAAATGGCTATAGAGCATATATTAGAAACAAACTATCCAAGAAAGGCATTTTGG CACTTTGATGATTTAATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MAIKMDKNFTLEILNLLKNNVLKNRLKIGKELTEMLIDEIDKLIETANEISEEISKNSPNNSSLYDLRLIYNKLSTLYED IDKLLGEIECILSLSNKDIKNWKLWKNLGDKAYLWKAYYEALFCYNKALELNQNTELLCKKGYALLKLYKRDLAIKYFEK ASEKDRNNYKALFGLGKSYYLMSDNKNSIKYFEKVLELNPNDVEALEYLGELYYEEDCEKAINYFKKALELKPDDIDLIL KVAFTYFKLKKYKHALKYFEKALKLNPNVFELEQIYESMGRIYIYLGEDEKAIECFEKLKEINLYHYEIYEIIALTYEEV GNIEKAKEFYKKLV
Sequences:
>Translated_334_residues MAIKMDKNFTLEILNLLKNNVLKNRLKIGKELTEMLIDEIDKLIETANEISEEISKNSPNNSSLYDLRLIYNKLSTLYED IDKLLGEIECILSLSNKDIKNWKLWKNLGDKAYLWKAYYEALFCYNKALELNQNTELLCKKGYALLKLYKRDLAIKYFEK ASEKDRNNYKALFGLGKSYYLMSDNKNSIKYFEKVLELNPNDVEALEYLGELYYEEDCEKAINYFKKALELKPDDIDLIL KVAFTYFKLKKYKHALKYFEKALKLNPNVFELEQIYESMGRIYIYLGEDEKAIECFEKLKEINLYHYEIYEIIALTYEEV GNIEKAKEFYKKLV >Mature_333_residues AIKMDKNFTLEILNLLKNNVLKNRLKIGKELTEMLIDEIDKLIETANEISEEISKNSPNNSSLYDLRLIYNKLSTLYEDI DKLLGEIECILSLSNKDIKNWKLWKNLGDKAYLWKAYYEALFCYNKALELNQNTELLCKKGYALLKLYKRDLAIKYFEKA SEKDRNNYKALFGLGKSYYLMSDNKNSIKYFEKVLELNPNDVEALEYLGELYYEEDCEKAINYFKKALELKPDDIDLILK VAFTYFKLKKYKHALKYFEKALKLNPNVFELEQIYESMGRIYIYLGEDEKAIECFEKLKEINLYHYEIYEIIALTYEEVG NIEKAKEFYKKLV
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 7 TPR repeats
Homologues:
Organism=Homo sapiens, GI38146008, Length=238, Percent_Identity=23.5294117647059, Blast_Score=65, Evalue=8e-11, Organism=Homo sapiens, GI38146012, Length=238, Percent_Identity=23.5294117647059, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y798_METJA (Q58208)
Other databases:
- EMBL: L77117 - PIR: F64399 - RefSeq: NP_247788.1 - ProteinModelPortal: Q58208 - SMR: Q58208 - GeneID: 1451680 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0798 - NMPDR: fig|243232.1.peg.825 - TIGR: MJ0798 - OMA: MISIVET - ProtClustDB: CLSK2749918 - BioCyc: MJAN243232:MJ_0798-MONOMER - GO: GO:0005488 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 - Gene3D: G3DSA:1.25.40.10 - SMART: SM00028
Pfam domain/function: PF00515 TPR_1
EC number: NA
Molecular weight: Translated: 39695; Mature: 39564
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: PS50005 TPR; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKMDKNFTLEILNLLKNNVLKNRLKIGKELTEMLIDEIDKLIETANEISEEISKNSPN CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NSSLYDLRLIYNKLSTLYEDIDKLLGEIECILSLSNKDIKNWKLWKNLGDKAYLWKAYYE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHH ALFCYNKALELNQNTELLCKKGYALLKLYKRDLAIKYFEKASEKDRNNYKALFGLGKSYY HHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEE LMSDNKNSIKYFEKVLELNPNDVEALEYLGELYYEEDCEKAINYFKKALELKPDDIDLIL EECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH KVAFTYFKLKKYKHALKYFEKALKLNPNVFELEQIYESMGRIYIYLGEDEKAIECFEKLK HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHH EINLYHYEIYEIIALTYEEVGNIEKAKEFYKKLV HCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure AIKMDKNFTLEILNLLKNNVLKNRLKIGKELTEMLIDEIDKLIETANEISEEISKNSPN EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NSSLYDLRLIYNKLSTLYEDIDKLLGEIECILSLSNKDIKNWKLWKNLGDKAYLWKAYYE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHH ALFCYNKALELNQNTELLCKKGYALLKLYKRDLAIKYFEKASEKDRNNYKALFGLGKSYY HHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEE LMSDNKNSIKYFEKVLELNPNDVEALEYLGELYYEEDCEKAINYFKKALELKPDDIDLIL EECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH KVAFTYFKLKKYKHALKYFEKALKLNPNVFELEQIYESMGRIYIYLGEDEKAIECFEKLK HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHH EINLYHYEIYEIIALTYEEVGNIEKAKEFYKKLV HCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087