| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668979
Identifier: 15668979
GI number: 15668979
Start: 717487
End: 719001
Strand: Direct
Name: 15668979
Synonym: MJ0795
Alternate gene names: NA
Gene position: 717487-719001 (Clockwise)
Preceding gene: 15668978
Following gene: 15668980
Centisome position: 43.09
GC content: 27.59
Gene sequence:
>1515_bases ATGAAGAGATTAAAAAACTTATTTATCATCTTTATCTTCCTATTTCTTTTATCTCAGGTTTCTGCCTATATAACCTTCAA AAATATTGATTATAACGCTCAATACTTGGAGCCATCTAAAACCTATGATTTATATATAACAATAGAATCAGACAAAGAAA TCAATAATACAGTTGTATATATAGAACCAACAAATCAAATATCCAAAGAAAACATAGAGATTATTAGAGGAAAGCAATGG ATTGGACATCTTTTTCCTTATGAGTATGGTGTAGCTCACTTAATAATAAAAATAAATCCTAATGCACCAAATTATGATTA TAAGATAACAGGTTATTGCAACTATACAAAAGGTAATCAGCAATATTCTGAAAATAGAATTTTTACCCTTCCAGTGAGAG GAAAGGCAAACTTAGTTATAGAAACCACTAATAATATACTAAAAGTTGGTAATAATCAAATTCTCTTACTATTGACAAAT AAAGGAACAGGAACTGCTGAAAATATAAAAATAGAATTTCAAAACTCGAATAATTTAATGGTTTTAGGAGATAATACTTT CACAATATCTGCCTTGGGTTCAAAGACATCTACATACATTCCACTAACTATCTTTGCCAAAAAAGAAGGAGTTTATTCTA TAAATTACAAAATATCTTACAAGAACCCTTATAATTTGTTGGAATTAACCCAAAAATCAGAGACAATAGAAGGGGACTCA AAAACAGAGACCTTAACGTATCAAAATAAAAACATAGTTGAAGAAACTGGAATTTTAACCTTCAATGTATTCCCAAATGA GTTAATTTCAATAAATATAAAAAACCCAACTATTACAGTTGGAAAGATAGAAAATCTAACAATTTCAATAAAAAATAATT ATAAAGATTCTTTATTTGTTGTTCAAATAAGTAAATACTTTATTGGAAATAACCAAAAATCTATATTCATCAAAAAAGGA GAGACAAAAAATCTAACTTTCCAAATAAAAGTAGATAAAGAGGGAGTTACTTCAATTCCTATAGTTATATATTTCGATAA CAATCAGATTGAGAAAAATCTAACAATAAATGTTGTAGGAAAGGCAGATTTGGTTTTAAGTGGGATTGATATAGAAAGTT CATTTAACGAAATAAAGATAACTGGAGATATTGACAACATTGGAACTGGAAAGGCAAAGAGCGTCTTAATCTCAATAGAA AAAACAAAAAACATCATTCCAAAAAAGCCGTATGAAAACTACTTCGTTGGAACATTAAATCCAGATGATTATGGTAGTTT TGAACTGCACTGCCAAATTAATGGAAATGTAAATGAAATTCCACTTAAAATAAGCTATAGAGATGAAGATAACAACCTAA TAACCATATATAAAACAGTAAAAATCAGTAAAGAAGTGGTTTCCTTAAAGACTAATAATAATGGAGGAATTAATTATTTA GTTGTTGGAATAGCTATATTGTTCTGTGTTGGAGTAGTTTATTTAATTTATAGGGGATTCGTAAAGAAAAAGTGA
Upstream 100 bases:
>100_bases CAACAAGAAATGCGTTTATAACTGCACTAATTCCAACAGTTATATTTGGTTTGTATCAACTATACAGTGTATTAAAGTTA CTATAAAATGAGGGAAAAAG
Downstream 100 bases:
>100_bases TATTATGAAAGGAATAAATCCATTTTATTTTTATATTGGAATGGCTTTAATACTCGCGTCAATCGTATCCATACTTTTAA TTACTAAATCAATACTGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 504; Mature: 504
Protein sequence:
>504_residues MKRLKNLFIIFIFLFLLSQVSAYITFKNIDYNAQYLEPSKTYDLYITIESDKEINNTVVYIEPTNQISKENIEIIRGKQW IGHLFPYEYGVAHLIIKINPNAPNYDYKITGYCNYTKGNQQYSENRIFTLPVRGKANLVIETTNNILKVGNNQILLLLTN KGTGTAENIKIEFQNSNNLMVLGDNTFTISALGSKTSTYIPLTIFAKKEGVYSINYKISYKNPYNLLELTQKSETIEGDS KTETLTYQNKNIVEETGILTFNVFPNELISINIKNPTITVGKIENLTISIKNNYKDSLFVVQISKYFIGNNQKSIFIKKG ETKNLTFQIKVDKEGVTSIPIVIYFDNNQIEKNLTINVVGKADLVLSGIDIESSFNEIKITGDIDNIGTGKAKSVLISIE KTKNIIPKKPYENYFVGTLNPDDYGSFELHCQINGNVNEIPLKISYRDEDNNLITIYKTVKISKEVVSLKTNNNGGINYL VVGIAILFCVGVVYLIYRGFVKKK
Sequences:
>Translated_504_residues MKRLKNLFIIFIFLFLLSQVSAYITFKNIDYNAQYLEPSKTYDLYITIESDKEINNTVVYIEPTNQISKENIEIIRGKQW IGHLFPYEYGVAHLIIKINPNAPNYDYKITGYCNYTKGNQQYSENRIFTLPVRGKANLVIETTNNILKVGNNQILLLLTN KGTGTAENIKIEFQNSNNLMVLGDNTFTISALGSKTSTYIPLTIFAKKEGVYSINYKISYKNPYNLLELTQKSETIEGDS KTETLTYQNKNIVEETGILTFNVFPNELISINIKNPTITVGKIENLTISIKNNYKDSLFVVQISKYFIGNNQKSIFIKKG ETKNLTFQIKVDKEGVTSIPIVIYFDNNQIEKNLTINVVGKADLVLSGIDIESSFNEIKITGDIDNIGTGKAKSVLISIE KTKNIIPKKPYENYFVGTLNPDDYGSFELHCQINGNVNEIPLKISYRDEDNNLITIYKTVKISKEVVSLKTNNNGGINYL VVGIAILFCVGVVYLIYRGFVKKK >Mature_504_residues MKRLKNLFIIFIFLFLLSQVSAYITFKNIDYNAQYLEPSKTYDLYITIESDKEINNTVVYIEPTNQISKENIEIIRGKQW IGHLFPYEYGVAHLIIKINPNAPNYDYKITGYCNYTKGNQQYSENRIFTLPVRGKANLVIETTNNILKVGNNQILLLLTN KGTGTAENIKIEFQNSNNLMVLGDNTFTISALGSKTSTYIPLTIFAKKEGVYSINYKISYKNPYNLLELTQKSETIEGDS KTETLTYQNKNIVEETGILTFNVFPNELISINIKNPTITVGKIENLTISIKNNYKDSLFVVQISKYFIGNNQKSIFIKKG ETKNLTFQIKVDKEGVTSIPIVIYFDNNQIEKNLTINVVGKADLVLSGIDIESSFNEIKITGDIDNIGTGKAKSVLISIE KTKNIIPKKPYENYFVGTLNPDDYGSFELHCQINGNVNEIPLKISYRDEDNNLITIYKTVKISKEVVSLKTNNNGGINYL VVGIAILFCVGVVYLIYRGFVKKK
Specific function: Unknown
COG id: COG1361
COG function: function code M; S-layer domain
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1506 and MJ1561
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y795_METJA (Q58205)
Other databases:
- EMBL: L77117 - PIR: C64399 - RefSeq: NP_247783.1 - ProteinModelPortal: Q58205 - GeneID: 1451675 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0795 - NMPDR: fig|243232.1.peg.820 - TIGR: MJ0795 - HOGENOM: HBG541151 - OMA: YSENRIF - ProtClustDB: CLSK796581 - BioCyc: MJAN243232:MJ_0795-MONOMER - InterPro: IPR011635
Pfam domain/function: PF07705 CARDB
EC number: NA
Molecular weight: Translated: 57148; Mature: 57148
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xd84e098)-;
Cys/Met content:
0.6 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLKNLFIIFIFLFLLSQVSAYITFKNIDYNAQYLEPSKTYDLYITIESDKEINNTVVY CCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEECCCCCEEEEEEEECCCCCCCEEEE IEPTNQISKENIEIIRGKQWIGHLFPYEYGVAHLIIKINPNAPNYDYKITGYCNYTKGNQ EECCCCCCCCCEEEEECCCHHHHCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEECCCCC QYSENRIFTLPVRGKANLVIETTNNILKVGNNQILLLLTNKGTGTAENIKIEFQNSNNLM CCCCCCEEEEEECCCCEEEEEECCCEEEECCCEEEEEEECCCCCCCEEEEEEEECCCCEE VLGDNTFTISALGSKTSTYIPLTIFAKKEGVYSINYKISYKNPYNLLELTQKSETIEGDS EEECCEEEEEEECCCCCEEEEEEEEEECCCEEEEEEEEEECCCCCEEEEECCCCCCCCCC KTETLTYQNKNIVEETGILTFNVFPNELISINIKNPTITVGKIENLTISIKNNYKDSLFV CCEEEEECCCCEEECCCEEEEEECCCEEEEEEECCCEEEEEEEEEEEEEEECCCCCCEEE VQISKYFIGNNQKSIFIKKGETKNLTFQIKVDKEGVTSIPIVIYFDNNQIEKNLTINVVG EEEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCCCEEEEEEEECCCEECCEEEEEEEE KADLVLSGIDIESSFNEIKITGDIDNIGTGKAKSVLISIEKTKNIIPKKPYENYFVGTLN CCEEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECC PDDYGSFELHCQINGNVNEIPLKISYRDEDNNLITIYKTVKISKEVVSLKTNNNGGINYL CCCCCCEEEEEEECCCCEEEEEEEEEECCCCCEEEEEEEEEEEEEEEEEEECCCCCEEEH VVGIAILFCVGVVYLIYRGFVKKK HHHHHHHHHHHHHHHHHHHHHCCH >Mature Secondary Structure MKRLKNLFIIFIFLFLLSQVSAYITFKNIDYNAQYLEPSKTYDLYITIESDKEINNTVVY CCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEECCCCCEEEEEEEECCCCCCCEEEE IEPTNQISKENIEIIRGKQWIGHLFPYEYGVAHLIIKINPNAPNYDYKITGYCNYTKGNQ EECCCCCCCCCEEEEECCCHHHHCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEECCCCC QYSENRIFTLPVRGKANLVIETTNNILKVGNNQILLLLTNKGTGTAENIKIEFQNSNNLM CCCCCCEEEEEECCCCEEEEEECCCEEEECCCEEEEEEECCCCCCCEEEEEEEECCCCEE VLGDNTFTISALGSKTSTYIPLTIFAKKEGVYSINYKISYKNPYNLLELTQKSETIEGDS EEECCEEEEEEECCCCCEEEEEEEEEECCCEEEEEEEEEECCCCCEEEEECCCCCCCCCC KTETLTYQNKNIVEETGILTFNVFPNELISINIKNPTITVGKIENLTISIKNNYKDSLFV CCEEEEECCCCEEECCCEEEEEECCCEEEEEEECCCEEEEEEEEEEEEEEECCCCCCEEE VQISKYFIGNNQKSIFIKKGETKNLTFQIKVDKEGVTSIPIVIYFDNNQIEKNLTINVVG EEEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCCCEEEEEEEECCCEECCEEEEEEEE KADLVLSGIDIESSFNEIKITGDIDNIGTGKAKSVLISIEKTKNIIPKKPYENYFVGTLN CCEEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEECC PDDYGSFELHCQINGNVNEIPLKISYRDEDNNLITIYKTVKISKEVVSLKTNNNGGINYL CCCCCCEEEEEEECCCCEEEEEEEEEECCCCCEEEEEEEEEEEEEEEEEEECCCCCEEEH VVGIAILFCVGVVYLIYRGFVKKK HHHHHHHHHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087