Click here to switch to the map view.

The map label for this gene is 15668962

Identifier: 15668962

GI number: 15668962

Start: 701559

End: 703724

Strand: Reverse

Name: 15668962

Synonym: MJ0781

Alternate gene names: NA

Gene position: 703724-701559 (Counterclockwise)

Preceding gene: 15668963

Following gene: 15668961

Centisome position: 42.27

GC content: 31.16

Gene sequence:

>2166_bases
TTGATAATTAAAAATCAGTTAATTTTTGTTAATTTTTACGTAATATTAATAATCTGGTGGTTTGTAATGGGGATATTAGA
CAAAATACAGAAAAAATCTGAAAAAATTGAAAAAGAAAAAAAATCTGAAACAGTGATTCCAAGTGATACTAAACTCAAAC
CTATAGAGCCCCATCCAACTATTAATAAAAAGGCAACAGTTGGAAATGATGAAACCATATTAGATACTTACAGTATAAAA
ATTGATGAAATAGAAATGGAAGTAGTAATTAAAAGAGAGGAGGGTTATATTTATTATTTAGTCCCTGAAATTGACAAAAT
TAATATGTCTCTCTCAAAACTTACAAAAGACCACTTAAATCATATAAAATCTCAAATCAGTGATTTGGGTCTAATAGAAT
ATGACCAAATAAGAGAGTATTTAACAAATTTCTCCATGAGATATAATTTGGCTATTCCGTATATCGACTCATTAGCAAAA
TTCTTTTATTTAGTAATTGGAAGGCTTGGTTTATTAGAAGTTCCACTAAATGATGATAGATTAGAAGAGGTTATGGTTAA
TGGTTACAATGTTCCAGTTTTTGTATTTCATAGAAAACATCAGATGTGTGAAACAAATATCGTGTTAGATAGAAATGAAG
TTGATAGGATTATTGAAAGTATTGCAAATTTAGTTAATAGACCAATAGATTCAAGAGTTCCAATGCTTGATGCTTTCCTA
CCAGATGGAAGTAGAGTGAATGCTACCACAGCAGATATAACTATGAACGGAGCTACATTAACAATAAGAAAATTCTCAAA
AAATCCATTAACTGTCATCGATTTAATAAACTTTGGAACTTTGGATATCGACACTGCCGCTTTTTTATGGCAAGCTGTTG
AGGGTTACTTTGGAGCAAAACCTGCAAACACTTTAATAGCTGGGGGAACTGGTTCTGGAAAAACAACTTTATTGAATGTC
TTATCCCTATTCTCAATGTACAATGAAAGAATCATAACTATTGAAGACACCCCAGAGTTGCAGATTCCTCATAAGCATGT
TATAAAGATGGTTACAAGACCTGCAAGACCTGGAATGCCAGAATATGAAGTTACAATGGATGATTTAATTAAGAACGCTC
TAAGAATGAGACCTGATAGGATTTTTGTTGGAGAGGTTAGAGGAAAAGAAGCTCATTCATTGTTAGTTGCTATGAACACT
GGACACGATGGGGCTTTAGCTTATGATGAACCTATTTATTTATCCGATGGGAATATAATAAACATTGGAGAGTTTGTGGA
TAAATTCTTTAAAAAATACAAAAACAGTATAAAAAAAGAAGATAATGGATTTGGGTGGATAGATATTGGAAACGAAAACA
TATATATCAAAAGTTTCAATAAATTATCATTAATTATTGAGGATAAAAGAATATTGAGAGTTTGGCGAAAAAAATATTCT
GGAAAATTGATTAAAATAACTACCAAAAACAGGAGAGAGATTACACTAACCCACGACCATCCTGTTTATATATCAAAGAC
AGGAGAAGTTCTTGAAATAAATGCTGAAATGGTAAAGGTCGGAGATTATATTTACATTCCAAAAAATAACACTATAAATT
TAGATGAAGTAATTAAAGTAGAAACCGTTGATTATAATGGACACATATATGACCTAACAGTTGAAGATAATCACACATAT
ATCGCTGGAAAAAACGAAGGTTTTGCTGTCTCAAACTGTTCTGGAACATTACATGCTAATAGTGCAGATGAAGCCATTTT
AAGATTAACAAGCCCACCAATGAATGTTCCAAAGATTATGTTAACAGCATTAAATTTTATTATAAATCAGCAAAGGATTA
GAAGAGCTGGAAAAACGATTAGGAGGATTCTTGGAATTGTAGAGATTGTAAAAGGTGGTGGTGAAGGTCATGAATTTGCT
AAAACTACCCTTTACGAATACAATGGTTTAAAAGATAGTTTAGAAAGAAGAGGAATTTGTATGTGGGAAGAAGAAGTTTG
TGAAATAGCGGGGATTACTAAAGAGGAATTATTAAGAGACAGAGAAAATAGGAAAAAGGTTTTAAGTTACTTGTACAAAA
ATAATATTAGAAAACTTGAAAATGTCTCTGATTACATAATGAGGTACCAGGTAGATCCAGAAAAACTTCTGAGATCGATA
AGATGA

Upstream 100 bases:

>100_bases
ACAATAAGAAATAGATACAAGGAACTAACCGAGCATTTGGATATTGATGTAACTCTGTAGATATTATAAATAGTTAGCTA
ACTTTTTGTGTAGTTAAACC

Downstream 100 bases:

>100_bases
TATTACCTACTTGGTGAATTAAATGAAAGGAATTTTTGAAAAACTAAAGAGAAGAATCGATATACTATTATATAAGTTGG
GTATAAGACCACTTAGTATA

Product: type II secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 721; Mature: 721

Protein sequence:

>721_residues
MIIKNQLIFVNFYVILIIWWFVMGILDKIQKKSEKIEKEKKSETVIPSDTKLKPIEPHPTINKKATVGNDETILDTYSIK
IDEIEMEVVIKREEGYIYYLVPEIDKINMSLSKLTKDHLNHIKSQISDLGLIEYDQIREYLTNFSMRYNLAIPYIDSLAK
FFYLVIGRLGLLEVPLNDDRLEEVMVNGYNVPVFVFHRKHQMCETNIVLDRNEVDRIIESIANLVNRPIDSRVPMLDAFL
PDGSRVNATTADITMNGATLTIRKFSKNPLTVIDLINFGTLDIDTAAFLWQAVEGYFGAKPANTLIAGGTGSGKTTLLNV
LSLFSMYNERIITIEDTPELQIPHKHVIKMVTRPARPGMPEYEVTMDDLIKNALRMRPDRIFVGEVRGKEAHSLLVAMNT
GHDGALAYDEPIYLSDGNIINIGEFVDKFFKKYKNSIKKEDNGFGWIDIGNENIYIKSFNKLSLIIEDKRILRVWRKKYS
GKLIKITTKNRREITLTHDHPVYISKTGEVLEINAEMVKVGDYIYIPKNNTINLDEVIKVETVDYNGHIYDLTVEDNHTY
IAGKNEGFAVSNCSGTLHANSADEAILRLTSPPMNVPKIMLTALNFIINQQRIRRAGKTIRRILGIVEIVKGGGEGHEFA
KTTLYEYNGLKDSLERRGICMWEEEVCEIAGITKEELLRDRENRKKVLSYLYKNNIRKLENVSDYIMRYQVDPEKLLRSI
R

Sequences:

>Translated_721_residues
MIIKNQLIFVNFYVILIIWWFVMGILDKIQKKSEKIEKEKKSETVIPSDTKLKPIEPHPTINKKATVGNDETILDTYSIK
IDEIEMEVVIKREEGYIYYLVPEIDKINMSLSKLTKDHLNHIKSQISDLGLIEYDQIREYLTNFSMRYNLAIPYIDSLAK
FFYLVIGRLGLLEVPLNDDRLEEVMVNGYNVPVFVFHRKHQMCETNIVLDRNEVDRIIESIANLVNRPIDSRVPMLDAFL
PDGSRVNATTADITMNGATLTIRKFSKNPLTVIDLINFGTLDIDTAAFLWQAVEGYFGAKPANTLIAGGTGSGKTTLLNV
LSLFSMYNERIITIEDTPELQIPHKHVIKMVTRPARPGMPEYEVTMDDLIKNALRMRPDRIFVGEVRGKEAHSLLVAMNT
GHDGALAYDEPIYLSDGNIINIGEFVDKFFKKYKNSIKKEDNGFGWIDIGNENIYIKSFNKLSLIIEDKRILRVWRKKYS
GKLIKITTKNRREITLTHDHPVYISKTGEVLEINAEMVKVGDYIYIPKNNTINLDEVIKVETVDYNGHIYDLTVEDNHTY
IAGKNEGFAVSNCSGTLHANSADEAILRLTSPPMNVPKIMLTALNFIINQQRIRRAGKTIRRILGIVEIVKGGGEGHEFA
KTTLYEYNGLKDSLERRGICMWEEEVCEIAGITKEELLRDRENRKKVLSYLYKNNIRKLENVSDYIMRYQVDPEKLLRSI
R
>Mature_721_residues
MIIKNQLIFVNFYVILIIWWFVMGILDKIQKKSEKIEKEKKSETVIPSDTKLKPIEPHPTINKKATVGNDETILDTYSIK
IDEIEMEVVIKREEGYIYYLVPEIDKINMSLSKLTKDHLNHIKSQISDLGLIEYDQIREYLTNFSMRYNLAIPYIDSLAK
FFYLVIGRLGLLEVPLNDDRLEEVMVNGYNVPVFVFHRKHQMCETNIVLDRNEVDRIIESIANLVNRPIDSRVPMLDAFL
PDGSRVNATTADITMNGATLTIRKFSKNPLTVIDLINFGTLDIDTAAFLWQAVEGYFGAKPANTLIAGGTGSGKTTLLNV
LSLFSMYNERIITIEDTPELQIPHKHVIKMVTRPARPGMPEYEVTMDDLIKNALRMRPDRIFVGEVRGKEAHSLLVAMNT
GHDGALAYDEPIYLSDGNIINIGEFVDKFFKKYKNSIKKEDNGFGWIDIGNENIYIKSFNKLSLIIEDKRILRVWRKKYS
GKLIKITTKNRREITLTHDHPVYISKTGEVLEINAEMVKVGDYIYIPKNNTINLDEVIKVETVDYNGHIYDLTVEDNHTY
IAGKNEGFAVSNCSGTLHANSADEAILRLTSPPMNVPKIMLTALNFIINQQRIRRAGKTIRRILGIVEIVKGGGEGHEFA
KTTLYEYNGLKDSLERRGICMWEEEVCEIAGITKEELLRDRENRKKVLSYLYKNNIRKLENVSDYIMRYQVDPEKLLRSI
R

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y781_METJA (Q58191)

Other databases:

- EMBL:   L77117
- PIR:   E64397
- RefSeq:   NP_247766.1
- PDB:   2JMZ
- PDB:   2JNQ
- PDBsum:   2JMZ
- PDBsum:   2JNQ
- ProteinModelPortal:   Q58191
- SMR:   Q58191
- GeneID:   1451658
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0781
- NMPDR:   fig|243232.1.peg.803
- TIGR:   MJ0781
- HOGENOM:   HBG742142
- OMA:   MYNERII
- ProtClustDB:   CLSK382413
- BioCyc:   MJAN243232:MJ_0781-MONOMER
- GO:   GO:0005622
- GO:   GO:0006810
- InterPro:   IPR003593
- InterPro:   IPR011451
- InterPro:   IPR003586
- InterPro:   IPR003587
- InterPro:   IPR006141
- InterPro:   IPR001482
- SMART:   SM00382
- SMART:   SM00305
- SMART:   SM00306
- TIGRFAMs:   TIGR01443
- TIGRFAMs:   TIGR01445

Pfam domain/function: PF07591 DUF1557; PF00437 GSPII_E

EC number: NA

Molecular weight: Translated: 82744; Mature: 82744

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS50818 INTEIN_C_TER; PS50817 INTEIN_N_TER; PS00227 TUBULIN

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd194eac)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIKNQLIFVNFYVILIIWWFVMGILDKIQKKSEKIEKEKKSETVIPSDTKLKPIEPHPT
CEEECEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
INKKATVGNDETILDTYSIKIDEIEMEVVIKREEGYIYYLVPEIDKINMSLSKLTKDHLN
CCCCEECCCCCEEEEEEEEEEEEEEEEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHH
HIKSQISDLGLIEYDQIREYLTNFSMRYNLAIPYIDSLAKFFYLVIGRLGLLEVPLNDDR
HHHHHHHHCCCCCHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHCCCCEEECCCCHHH
LEEVMVNGYNVPVFVFHRKHQMCETNIVLDRNEVDRIIESIANLVNRPIDSRVPMLDAFL
HHHHHHCCCCCEEEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHCC
PDGSRVNATTADITMNGATLTIRKFSKNPLTVIDLINFGTLDIDTAAFLWQAVEGYFGAK
CCCCEEEEEEEEEEECCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCC
PANTLIAGGTGSGKTTLLNVLSLFSMYNERIITIEDTPELQIPHKHVIKMVTRPARPGMP
CCCEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCC
EYEVTMDDLIKNALRMRPDRIFVGEVRGKEAHSLLVAMNTGHDGALAYDEPIYLSDGNII
CCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCCEEECCCEEECCCCEE
NIGEFVDKFFKKYKNSIKKEDNGFGWIDIGNENIYIKSFNKLSLIIEDKRILRVWRKKYS
EHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCEEEEEECCHHHHHHHHHHHC
GKLIKITTKNRREITLTHDHPVYISKTGEVLEINAEMVKVGDYIYIPKNNTINLDEVIKV
CCEEEEEECCCEEEEEECCCCEEEECCCCEEEECCEEEEECCEEEECCCCEECHHHEEEE
ETVDYNGHIYDLTVEDNHTYIAGKNEGFAVSNCSGTLHANSADEAILRLTSPPMNVPKIM
EEEECCCEEEEEEEECCEEEEEECCCCEEEECCCCEEECCCCCCEEEEECCCCCCCHHHH
LTALNFIINQQRIRRAGKTIRRILGIVEIVKGGGEGHEFAKTTLYEYNGLKDSLERRGIC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHCCCE
MWEEEVCEIAGITKEELLRDRENRKKVLSYLYKNNIRKLENVSDYIMRYQVDPEKLLRSI
EEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHC
R
H
>Mature Secondary Structure
MIIKNQLIFVNFYVILIIWWFVMGILDKIQKKSEKIEKEKKSETVIPSDTKLKPIEPHPT
CEEECEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
INKKATVGNDETILDTYSIKIDEIEMEVVIKREEGYIYYLVPEIDKINMSLSKLTKDHLN
CCCCEECCCCCEEEEEEEEEEEEEEEEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHH
HIKSQISDLGLIEYDQIREYLTNFSMRYNLAIPYIDSLAKFFYLVIGRLGLLEVPLNDDR
HHHHHHHHCCCCCHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHCCCCEEECCCCHHH
LEEVMVNGYNVPVFVFHRKHQMCETNIVLDRNEVDRIIESIANLVNRPIDSRVPMLDAFL
HHHHHHCCCCCEEEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHCC
PDGSRVNATTADITMNGATLTIRKFSKNPLTVIDLINFGTLDIDTAAFLWQAVEGYFGAK
CCCCEEEEEEEEEEECCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCC
PANTLIAGGTGSGKTTLLNVLSLFSMYNERIITIEDTPELQIPHKHVIKMVTRPARPGMP
CCCEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCC
EYEVTMDDLIKNALRMRPDRIFVGEVRGKEAHSLLVAMNTGHDGALAYDEPIYLSDGNII
CCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCCEEECCCEEECCCCEE
NIGEFVDKFFKKYKNSIKKEDNGFGWIDIGNENIYIKSFNKLSLIIEDKRILRVWRKKYS
EHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCEEEEEECCHHHHHHHHHHHC
GKLIKITTKNRREITLTHDHPVYISKTGEVLEINAEMVKVGDYIYIPKNNTINLDEVIKV
CCEEEEEECCCEEEEEECCCCEEEECCCCEEEECCEEEEECCEEEECCCCEECHHHEEEE
ETVDYNGHIYDLTVEDNHTYIAGKNEGFAVSNCSGTLHANSADEAILRLTSPPMNVPKIM
EEEECCCEEEEEEEECCEEEEEECCCCEEEECCCCEEECCCCCCEEEEECCCCCCCHHHH
LTALNFIINQQRIRRAGKTIRRILGIVEIVKGGGEGHEFAKTTLYEYNGLKDSLERRGIC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHCCCE
MWEEEVCEIAGITKEELLRDRENRKKVLSYLYKNNIRKLENVSDYIMRYQVDPEKLLRSI
EEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHC
R
H

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087