| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15668960
Identifier: 15668960
GI number: 15668960
Start: 699609
End: 700508
Strand: Reverse
Name: 15668960
Synonym: MJ0779
Alternate gene names: NA
Gene position: 700508-699609 (Counterclockwise)
Preceding gene: 15668961
Following gene: 15668954
Centisome position: 42.07
GC content: 29.89
Gene sequence:
>900_bases ATGCCCAAATACCTGACAACTCTATATAAAAGAACAATAAAAAGGAATATTATACTCTTTAAAAAACTTGGTAAGGATTT TGACGAAAAAAAGTTTATATTATTGTTAATAATTATAGCTGCGATACCTCTCCTAATATCATATTATTTACACTTAACCC TAAAAAGTATGATTATATTTGTAGTTATATACGTGGGAGCTGCATTGTTCATTCCATCTATTTTATATGAAAATAAAATA GAAACTCTTGAGAATAACATTCCACAAGCTCTTTATATTATGATATTAGCCCTCGAATCTGGAAGGTCCATAAACGAAGC ATTACTTGAAGTTGTTAAAAGTAATATAAAGGAAGTTAGCGATATATTTAGAAAAGTTTTATACTTAATGGAAAACCAAA AATTAAGTTTTGAAGAGTCTATGACAATTGTATCCAATTTATATGATTCTAAAGTATTAAGGATGTTAGCAAGAATTATG ATTGAAAACAGGAAATACGGAGGAGATTTGTCAGATTCTCTAAAAATATTAGCTAAAACTCTTGAAGACTTTAAAATGTA TAAGAGACAGTTATTGAGTGTTACAGCAAGTGGTTTAGCTATTGGTTTTATTATATTATGTGGAGTTATTCCAGCTGTTG CCGCATTATTGGGAGCTTATTTAATAGCAGTATCAGGCATGTTAAGTGGAGTAGCTCCAATACCCCCAGTTAAACCAGAA GATATATCAAAAGGATTTGAAATTGTGCAAATGGGAACGGCAATTATAGGAGCTTTATTTGCAATTCCAATATTTGGTTT AAAAATAGGGAGAATGTTCCTAATTTCTGCAGTAACTATGACAATCGGTGTTTTAGCATATTATACAATCTTAAAATTCG CTCCAGGAATATTCTCATAA
Upstream 100 bases:
>100_bases CTATCAACCTACTACTGTTGAAAATTGGTCCATTATTAACACTAATATTTGGAATTTTTGTTAAACTAAAAATAGAATAA AAATGATTTAATGTGATAGC
Downstream 100 bases:
>100_bases ATATTATTTTAAAAGATTGTTTATCTCATCATTTAGCAGAATAATTCTCTTAATTGAAGGATGATTTTTGCCCAATCTTT TTTCAAATTTTTTTATTACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MPKYLTTLYKRTIKRNIILFKKLGKDFDEKKFILLLIIIAAIPLLISYYLHLTLKSMIIFVVIYVGAALFIPSILYENKI ETLENNIPQALYIMILALESGRSINEALLEVVKSNIKEVSDIFRKVLYLMENQKLSFEESMTIVSNLYDSKVLRMLARIM IENRKYGGDLSDSLKILAKTLEDFKMYKRQLLSVTASGLAIGFIILCGVIPAVAALLGAYLIAVSGMLSGVAPIPPVKPE DISKGFEIVQMGTAIIGALFAIPIFGLKIGRMFLISAVTMTIGVLAYYTILKFAPGIFS
Sequences:
>Translated_299_residues MPKYLTTLYKRTIKRNIILFKKLGKDFDEKKFILLLIIIAAIPLLISYYLHLTLKSMIIFVVIYVGAALFIPSILYENKI ETLENNIPQALYIMILALESGRSINEALLEVVKSNIKEVSDIFRKVLYLMENQKLSFEESMTIVSNLYDSKVLRMLARIM IENRKYGGDLSDSLKILAKTLEDFKMYKRQLLSVTASGLAIGFIILCGVIPAVAALLGAYLIAVSGMLSGVAPIPPVKPE DISKGFEIVQMGTAIIGALFAIPIFGLKIGRMFLISAVTMTIGVLAYYTILKFAPGIFS >Mature_298_residues PKYLTTLYKRTIKRNIILFKKLGKDFDEKKFILLLIIIAAIPLLISYYLHLTLKSMIIFVVIYVGAALFIPSILYENKIE TLENNIPQALYIMILALESGRSINEALLEVVKSNIKEVSDIFRKVLYLMENQKLSFEESMTIVSNLYDSKVLRMLARIMI ENRKYGGDLSDSLKILAKTLEDFKMYKRQLLSVTASGLAIGFIILCGVIPAVAALLGAYLIAVSGMLSGVAPIPPVKPED ISKGFEIVQMGTAIIGALFAIPIFGLKIGRMFLISAVTMTIGVLAYYTILKFAPGIFS
Specific function: Unknown
COG id: COG2064
COG function: function code NU; Flp pilus assembly protein TadC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y779_METJA (Q58189)
Other databases:
- EMBL: L77117 - PIR: C64397 - RefSeq: NP_247764.1 - GeneID: 1451656 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0779 - NMPDR: fig|243232.1.peg.801 - TIGR: MJ0779 - HOGENOM: HBG540966 - OMA: EDAMILV - ProtClustDB: CLSK876328 - BioCyc: MJAN243232:MJ_0779-MONOMER - InterPro: IPR018076
Pfam domain/function: PF00482 GSPII_F
EC number: NA
Molecular weight: Translated: 33292; Mature: 33161
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xd39bf44)-; HASH(0xbba662c)-; HASH(0xc3b7a20)-; HASH(0xd770508)-; HASH(0xd7263c0)-; HASH(0xb364048)-;
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKYLTTLYKRTIKRNIILFKKLGKDFDEKKFILLLIIIAAIPLLISYYLHLTLKSMIIF CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVIYVGAALFIPSILYENKIETLENNIPQALYIMILALESGRSINEALLEVVKSNIKEVS HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH DIFRKVLYLMENQKLSFEESMTIVSNLYDSKVLRMLARIMIENRKYGGDLSDSLKILAKT HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH LEDFKMYKRQLLSVTASGLAIGFIILCGVIPAVAALLGAYLIAVSGMLSGVAPIPPVKPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH DISKGFEIVQMGTAIIGALFAIPIFGLKIGRMFLISAVTMTIGVLAYYTILKFAPGIFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH >Mature Secondary Structure PKYLTTLYKRTIKRNIILFKKLGKDFDEKKFILLLIIIAAIPLLISYYLHLTLKSMIIF CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVIYVGAALFIPSILYENKIETLENNIPQALYIMILALESGRSINEALLEVVKSNIKEVS HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH DIFRKVLYLMENQKLSFEESMTIVSNLYDSKVLRMLARIMIENRKYGGDLSDSLKILAKT HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH LEDFKMYKRQLLSVTASGLAIGFIILCGVIPAVAALLGAYLIAVSGMLSGVAPIPPVKPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH DISKGFEIVQMGTAIIGALFAIPIFGLKIGRMFLISAVTMTIGVLAYYTILKFAPGIFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087