| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668927
Identifier: 15668927
GI number: 15668927
Start: 672422
End: 672847
Strand: Reverse
Name: 15668927
Synonym: MJ0746
Alternate gene names: NA
Gene position: 672847-672422 (Counterclockwise)
Preceding gene: 15668928
Following gene: 15668926
Centisome position: 40.41
GC content: 36.85
Gene sequence:
>426_bases ATGGAGTTGGACTTAATAAATGAACACAAGATAGGAGTAACAAAAGGAACAGAGTTAGAAAAAGAAGTTCAAGCAAATTT TGAAGGAGAGTGCAAAGAGGTTGGATTATACTTAGCTATGGCAAGACAAGCTCAGAGGGAGGGGTTACCAGAGGTTGCTG AAGTTTTAATAAGAATTGCTATGGAAGAGGCTCAACACGCTGCACACTTTGCTGAAATGAACGGTTTAATTTCAGAAAAC TTAAAAGAAAACATTGAAATGATGTTAAAAGGAGAATGTATGGCAAACAAAGAGAAAAAAGCTGCTGCAACAAAGGCAAA AGAATTGGGTATAGACCCAGCTCATGACTTCTTTGATGAATCAAGTAGGGATGAAGCAAGACACGCAAAGATGTTAAAAG GAATCTTAGACAGATACTTCAAATAA
Upstream 100 bases:
>100_bases TAATTCATCACAAATGTATCGAATTTCGAACCATTAATATTATATAATCGTGATTGTTTATTTTATAATGTAATAATTAA AAAGTTAAAAAGGTGAAAGC
Downstream 100 bases:
>100_bases ATTTAATTAAAAATTTTTATTTAATTTTTATTTTTTAATTCTGTATTGAATATTGCAAACAAATTGATATTCTGGGTATT ATAATATTATTATATGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MELDLINEHKIGVTKGTELEKEVQANFEGECKEVGLYLAMARQAQREGLPEVAEVLIRIAMEEAQHAAHFAEMNGLISEN LKENIEMMLKGECMANKEKKAAATKAKELGIDPAHDFFDESSRDEARHAKMLKGILDRYFK
Sequences:
>Translated_141_residues MELDLINEHKIGVTKGTELEKEVQANFEGECKEVGLYLAMARQAQREGLPEVAEVLIRIAMEEAQHAAHFAEMNGLISEN LKENIEMMLKGECMANKEKKAAATKAKELGIDPAHDFFDESSRDEARHAKMLKGILDRYFK >Mature_141_residues MELDLINEHKIGVTKGTELEKEVQANFEGECKEVGLYLAMARQAQREGLPEVAEVLIRIAMEEAQHAAHFAEMNGLISEN LKENIEMMLKGECMANKEKKAAATKAKELGIDPAHDFFDESSRDEARHAKMLKGILDRYFK
Specific function: Unknown
COG id: COG1592
COG function: function code C; Rubrerythrin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y746_METJA (Q58156)
Other databases:
- EMBL: L77117 - PIR: B64393 - RefSeq: NP_247731.1 - ProteinModelPortal: Q58156 - SMR: Q58156 - GeneID: 1451623 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0746 - NMPDR: fig|243232.1.peg.768 - TIGR: MJ0746 - HOGENOM: HBG700480 - OMA: KMLKGIL - ProtClustDB: CLSK2749914 - BioCyc: MJAN243232:MJ_0746-MONOMER - InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR003251 - Gene3D: G3DSA:1.20.1260.10
Pfam domain/function: PF02915 Rubrerythrin; SSF47240 Ferritin/RR_like
EC number: NA
Molecular weight: Translated: 15905; Mature: 15905
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELDLINEHKIGVTKGTELEKEVQANFEGECKEVGLYLAMARQAQREGLPEVAEVLIRIA CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH MEEAQHAAHFAEMNGLISENLKENIEMMLKGECMANKEKKAAATKAKELGIDPAHDFFDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHCCCCCHHHHCC SSRDEARHAKMLKGILDRYFK CCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MELDLINEHKIGVTKGTELEKEVQANFEGECKEVGLYLAMARQAQREGLPEVAEVLIRIA CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH MEEAQHAAHFAEMNGLISENLKENIEMMLKGECMANKEKKAAATKAKELGIDPAHDFFDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHCCCCCHHHHCC SSRDEARHAKMLKGILDRYFK CCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087