Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668872

Identifier: 15668872

GI number: 15668872

Start: 617970

End: 618299

Strand: Reverse

Name: 15668872

Synonym: MJ0691

Alternate gene names: NA

Gene position: 618299-617970 (Counterclockwise)

Preceding gene: 15668873

Following gene: 15668871

Centisome position: 37.14

GC content: 35.15

Gene sequence:

>330_bases
ATGGATGTTGAAGAAATTAAAAGAAAAAAGCTTCTTGAATTGCAAAAAAAGCTTGCTGAACAACAACAGCAAGAAGAGGC
ATTATTAGAGGCGGAGATGCAAAAAAGAGCTTTATTAAGGAAAATATTAACACCTGAAGCAAGAGAGAGATTGGAGAGAA
TAAGATTGGCAAGACCAGAATTTGCTGAAGCTGTTGAAGTCCAACTAATCCAATTAGCTCAACTTGGAAGATTACCAATC
CCATTGAGTGATGAGGACTTTAAAGCTTTACTCGAGAGAATAAGTGCATTGACAAAGAGAAAGAGAGAAATTAAAATTGT
TAGAAAGTGA

Upstream 100 bases:

>100_bases
CTCCAAAAGGAAGAAGTTTCTTAGACAACATTGCTAAAGAGGTTAGGGATGAAATAATTAATGAAATCCCTGCTCTTGCT
AAATACTAAGGGGATGCTAA

Downstream 100 bases:

>100_bases
AACTTATGGATGTTCATGTTCTCTTTAGTGGAGGGAAAGATAGCTCCCTCTCTGCAGTGATATTAAAAAAACTTGGTTAC
AATCCTCATCTAATAACTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MDVEEIKRKKLLELQKKLAEQQQQEEALLEAEMQKRALLRKILTPEARERLERIRLARPEFAEAVEVQLIQLAQLGRLPI
PLSDEDFKALLERISALTKRKREIKIVRK

Sequences:

>Translated_109_residues
MDVEEIKRKKLLELQKKLAEQQQQEEALLEAEMQKRALLRKILTPEARERLERIRLARPEFAEAVEVQLIQLAQLGRLPI
PLSDEDFKALLERISALTKRKREIKIVRK
>Mature_109_residues
MDVEEIKRKKLLELQKKLAEQQQQEEALLEAEMQKRALLRKILTPEARERLERIRLARPEFAEAVEVQLIQLAQLGRLPI
PLSDEDFKALLERISALTKRKREIKIVRK

Specific function: Unknown

COG id: COG2118

COG function: function code R; DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PDCD5 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y691_METJA (Q58103)

Other databases:

- EMBL:   L77117
- PIR:   C64386
- RefSeq:   NP_247675.1
- ProteinModelPortal:   Q58103
- SMR:   Q58103
- GeneID:   1451557
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0691
- NMPDR:   fig|243232.1.peg.712
- TIGR:   MJ0691
- HOGENOM:   HBG726401
- OMA:   LYQAGQI
- ProtClustDB:   PRK04239
- BioCyc:   MJAN243232:MJ_0691-MONOMER
- HAMAP:   MF_00026
- InterPro:   IPR022889
- InterPro:   IPR002836
- Gene3D:   G3DSA:1.10.8.140
- PANTHER:   PTHR10840
- PIRSF:   PIRSF015730

Pfam domain/function: PF01984 dsDNA_bind; SSF46950 TFAR19-related

EC number: NA

Molecular weight: Translated: 12893; Mature: 12893

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVEEIKRKKLLELQKKLAEQQQQEEALLEAEMQKRALLRKILTPEARERLERIRLARPE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCH
FAEAVEVQLIQLAQLGRLPIPLSDEDFKALLERISALTKRKREIKIVRK
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDVEEIKRKKLLELQKKLAEQQQQEEALLEAEMQKRALLRKILTPEARERLERIRLARPE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCH
FAEAVEVQLIQLAQLGRLPIPLSDEDFKALLERISALTKRKREIKIVRK
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087