| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668666
Identifier: 15668666
GI number: 15668666
Start: 432871
End: 433677
Strand: Direct
Name: 15668666
Synonym: MJ0489
Alternate gene names: NA
Gene position: 432871-433677 (Clockwise)
Preceding gene: 15668665
Following gene: 15668667
Centisome position: 26.0
GC content: 31.35
Gene sequence:
>807_bases TTGGGGTGTGGAATTATGAAGTATGGAATAACTGAGATGGTAAAAACAATTGACACAAAAACAAGAGTTGTTGATGTGAC AAATGAGATAGCAAAGAAAAAATATCAAGCAATTAGGGATTTCTTAGAGGGAGAGGAGTTTAAAGAAGTTGTAATATTTG GGGTCTATTTATGGGGAAATTACACTGCCCAAATGCTTTCAAAATATGCTGATAAAGTTTATTTAGTTGATATACATGAA TTTATGAAAGGATTTGTTCCAAACAACAACAGTATAAAATTCTTAAATTTAAATGAGTTTAAACTAAAATTTATAAGAGG AGAAGTAAATCCTGATTTAATTGTTGATTTAACAGGACTGGGAGGAATTGAGCCTGAATTTTTAGCTAAATTTAATCCAA AGGTTTTTATTGTTGAAGACCCTAAGGGGGTTTTTGATGTTGATATTTATGAGGCAGACAATACATATAAGAGAACAGCT CCATTCATTGAAAAAGCAAAGGTAGGGGTTTTAAAAACCTATAGAAAGGCAAGAGTCTCAAAAACCTCTGGGACTATGAC ATTAACAATTGACACAATAGTTGATGCTTCAAGGGAGATAACAAGTTTGGACGGAGTTTTATATGCTATTCCAAACTTAA GATATTATGAAGGAATTTTATTCCACGAAAATGATATTCACAAATTTTTATCAGAGATTTCACAACCTGCTATCACAATA AGCACATTAAACGATGTATTAGATGAAGCTGAAGAGATACTCTCAAATAACATTAATCTCATCTATTCTTTTGTTGAGGA GCTTTAA
Upstream 100 bases:
>100_bases CATCAGTTATTCATAAAGAAGATATAGAGGAGAGAATAAAGAAAGAGTTAATTGAAGCATTAAGTAGAATTGGAATTTCC ATTTAATTTAATCTTTCATT
Downstream 100 bases:
>100_bases TTCCTCTTTTTAATTTAATTTTAAAATCTCTTTTGTGAGGGGAAATTATGAAAGTTACAATTATAGGAGCTTCTGGTAGA GTTGGGAGTGCAACAGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MGCGIMKYGITEMVKTIDTKTRVVDVTNEIAKKKYQAIRDFLEGEEFKEVVIFGVYLWGNYTAQMLSKYADKVYLVDIHE FMKGFVPNNNSIKFLNLNEFKLKFIRGEVNPDLIVDLTGLGGIEPEFLAKFNPKVFIVEDPKGVFDVDIYEADNTYKRTA PFIEKAKVGVLKTYRKARVSKTSGTMTLTIDTIVDASREITSLDGVLYAIPNLRYYEGILFHENDIHKFLSEISQPAITI STLNDVLDEAEEILSNNINLIYSFVEEL
Sequences:
>Translated_268_residues MGCGIMKYGITEMVKTIDTKTRVVDVTNEIAKKKYQAIRDFLEGEEFKEVVIFGVYLWGNYTAQMLSKYADKVYLVDIHE FMKGFVPNNNSIKFLNLNEFKLKFIRGEVNPDLIVDLTGLGGIEPEFLAKFNPKVFIVEDPKGVFDVDIYEADNTYKRTA PFIEKAKVGVLKTYRKARVSKTSGTMTLTIDTIVDASREITSLDGVLYAIPNLRYYEGILFHENDIHKFLSEISQPAITI STLNDVLDEAEEILSNNINLIYSFVEEL >Mature_267_residues GCGIMKYGITEMVKTIDTKTRVVDVTNEIAKKKYQAIRDFLEGEEFKEVVIFGVYLWGNYTAQMLSKYADKVYLVDIHEF MKGFVPNNNSIKFLNLNEFKLKFIRGEVNPDLIVDLTGLGGIEPEFLAKFNPKVFIVEDPKGVFDVDIYEADNTYKRTAP FIEKAKVGVLKTYRKARVSKTSGTMTLTIDTIVDASREITSLDGVLYAIPNLRYYEGILFHENDIHKFLSEISQPAITIS TLNDVLDEAEEILSNNINLIYSFVEEL
Specific function: Unknown
COG id: COG4017
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y489_METJA (Q57913)
Other databases:
- EMBL: L77117 - PIR: A64361 - RefSeq: NP_247465.1 - ProteinModelPortal: Q57913 - GeneID: 1451351 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0489 - NMPDR: fig|243232.1.peg.502 - TIGR: MJ0489 - HOGENOM: HBG539379 - OMA: KANAIKY - ProtClustDB: CLSK876204 - BioCyc: MJAN243232:MJ_0489-MONOMER - InterPro: IPR009573 - PIRSF: PIRSF019265
Pfam domain/function: PF06690 DUF1188
EC number: NA
Molecular weight: Translated: 30533; Mature: 30401
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCGIMKYGITEMVKTIDTKTRVVDVTNEIAKKKYQAIRDFLEGEEFKEVVIFGVYLWGN CCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHEEEEEEEEEECCC YTAQMLSKYADKVYLVDIHEFMKGFVPNNNSIKFLNLNEFKLKFIRGEVNPDLIVDLTGL HHHHHHHHHCCEEEEEEHHHHHHCCCCCCCCEEEEECCCEEEEEEECCCCCCEEEEECCC GGIEPEFLAKFNPKVFIVEDPKGVFDVDIYEADNTYKRTAPFIEKAKVGVLKTYRKARVS CCCCHHHHHCCCCEEEEEECCCCEEEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHCC KTSGTMTLTIDTIVDASREITSLDGVLYAIPNLRYYEGILFHENDIHKFLSEISQPAITI CCCCEEEEEEHHHHCCCHHHHHHCCCEEECCCCHHHCEEEEECHHHHHHHHHHCCCEEEH STLNDVLDEAEEILSNNINLIYSFVEEL HHHHHHHHHHHHHHHCCHHHHHHHHHHC >Mature Secondary Structure GCGIMKYGITEMVKTIDTKTRVVDVTNEIAKKKYQAIRDFLEGEEFKEVVIFGVYLWGN CCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCHHHEEEEEEEEEECCC YTAQMLSKYADKVYLVDIHEFMKGFVPNNNSIKFLNLNEFKLKFIRGEVNPDLIVDLTGL HHHHHHHHHCCEEEEEEHHHHHHCCCCCCCCEEEEECCCEEEEEEECCCCCCEEEEECCC GGIEPEFLAKFNPKVFIVEDPKGVFDVDIYEADNTYKRTAPFIEKAKVGVLKTYRKARVS CCCCHHHHHCCCCEEEEEECCCCEEEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHCC KTSGTMTLTIDTIVDASREITSLDGVLYAIPNLRYYEGILFHENDIHKFLSEISQPAITI CCCCEEEEEEHHHHCCCHHHHHHCCCEEECCCCHHHCEEEEECHHHHHHHHHHCCCEEEH STLNDVLDEAEEILSNNINLIYSFVEEL HHHHHHHHHHHHHHHCCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087